RNA–Protein interactions for RNA: ENST00000363904.1

RNU6-478P-201, Transcript of RNA, U6 small nuclear 478, pseudogene, humanhuman

BASIC

Gene RNU6-478P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-478P-201ENST00000363904 WDR36Q8NI36 951 aaKnown RBP-1.67□□□□□ -2.68
RNU6-478P-201ENST00000363904 CNIH3Q8TBE1 160 aa-1.67□□□□□ -2.68
RNU6-478P-201ENST00000363904 ITLN2Q8WWU7 325 aaPredicted RBP-1.67□□□□□ -2.68
RNU6-478P-201ENST00000363904 FCGR1BQ92637 280 aa-1.67□□□□□ -2.68
RNU6-478P-201ENST00000363904 TOP1MTQ969P6 601 aa-1.67□□□□□ -2.68
RNU6-478P-201ENST00000363904 SNX21Q969T3 373 aa-1.67□□□□□ -2.68
RNU6-478P-201ENST00000363904 ADIPOR1Q96A54 375 aa-1.67□□□□□ -2.68
RNU6-478P-201ENST00000363904 UBE2WQ96B02 151 aa-1.67□□□□□ -2.68
RNU6-478P-201ENST00000363904 FXYD5Q96DB9 178 aa-1.67□□□□□ -2.68
RNU6-478P-201ENST00000363904 CAPZA3Q96KX2 299 aa-1.67□□□□□ -2.68
RNU6-478P-201ENST00000363904 Q96NJ1 140 aa-1.67□□□□□ -2.68
RNU6-478P-201ENST00000363904 SLC25A23Q9BV35 468 aa-1.67□□□□□ -2.68
RNU6-478P-201ENST00000363904 ERVK-6Q9BXR3 956 aa-1.67□□□□□ -2.68
RNU6-478P-201ENST00000363904 AATFQ9NY61 560 aaKnown RBP eCLIP-1.67□□□□□ -2.68
RNU6-478P-201ENST00000363904 UTP6Q9NYH9 597 aaKnown RBP-1.67□□□□□ -2.68
RNU6-478P-201ENST00000363904 SEC14L3Q9UDX4 400 aa-1.67□□□□□ -2.68
RNU6-478P-201ENST00000363904 CYTH4Q9UIA0 394 aa-1.67□□□□□ -2.68
RNU6-478P-201ENST00000363904 TMEM5Q9Y2B1 443 aa-1.67□□□□□ -2.68
RNU6-478P-201ENST00000363904 TMED5Q9Y3A6 229 aa-1.67□□□□□ -2.68
RNU6-478P-201ENST00000363904 LAMA1P25391 3075 aa-1.67□□□□□ -2.68
RNU6-478P-201ENST00000363904 CSPG4Q6UVK1 2322 aa-1.67□□□□□ -2.68
RNU6-478P-201ENST00000363904 LOXHD1Q8IVV2 1947 aa-1.68□□□□□ -2.68
RNU6-478P-201ENST00000363904 DOCK4Q8N1I0 1966 aa-1.68□□□□□ -2.68
RNU6-478P-201ENST00000363904 MED13LQ71F56 2210 aa-1.68□□□□□ -2.68
RNU6-478P-201ENST00000363904 A0A087WSZ3 146 aa-1.68□□□□□ -2.68
RNU6-478P-201ENST00000363904 TMSB15BA0A087X1C1 80 aa-1.68□□□□□ -2.68
RNU6-478P-201ENST00000363904 C15orf38-AP3S2A0A0A6YYH1 394 aa-1.68□□□□□ -2.68
RNU6-478P-201ENST00000363904 TRGV5A0A0B4J1U4 118 aa-1.68□□□□□ -2.68
RNU6-478P-201ENST00000363904 A0A0B4J2A0 478 aa-1.68□□□□□ -2.68
RNU6-478P-201ENST00000363904 A6NCN8 305 aa-1.68□□□□□ -2.68
RNU6-478P-201ENST00000363904 LOC110117498-PIK3R3F6TDL0 507 aa-1.68□□□□□ -2.68
RNU6-478P-201ENST00000363904 ALOX15BO15296 676 aa-1.68□□□□□ -2.68
RNU6-478P-201ENST00000363904 DOK2O60496 412 aa-1.68□□□□□ -2.68
RNU6-478P-201ENST00000363904 IGKV1D-33P01593 117 aa-1.68□□□□□ -2.68
RNU6-478P-201ENST00000363904 IGKV1-33P01594 117 aa-1.68□□□□□ -2.68
RNU6-478P-201ENST00000363904 LDHCP07864 332 aa-1.68□□□□□ -2.68
RNU6-478P-201ENST00000363904 CD3GP09693 182 aa-1.68□□□□□ -2.68
RNU6-478P-201ENST00000363904 RORAP35398 523 aa-1.68□□□□□ -2.68
RNU6-478P-201ENST00000363904 CEBPDP49716 269 aaPredicted RBP-1.68□□□□□ -2.68
RNU6-478P-201ENST00000363904 ETV1P50549 477 aa-1.68□□□□□ -2.68
RNU6-478P-201ENST00000363904 SMSP52788 366 aa-1.68□□□□□ -2.68
RNU6-478P-201ENST00000363904 SUB1P53999 127 aaKnown RBP eCLIP-1.68□□□□□ -2.68
RNU6-478P-201ENST00000363904 OR4D2P58180 307 aa-1.68□□□□□ -2.68
RNU6-478P-201ENST00000363904 RPL23P62829 140 aaKnown RBP-1.68□□□□□ -2.68
RNU6-478P-201ENST00000363904 ZNF90Q03938 601 aa-1.68□□□□□ -2.68
RNU6-478P-201ENST00000363904 MXD4Q14582 209 aaPredicted RBP-1.68□□□□□ -2.68
RNU6-478P-201ENST00000363904 BCL2A1Q16548 175 aa-1.68□□□□□ -2.68
RNU6-478P-201ENST00000363904 HSP90AB2PQ58FF8 381 aa-1.68□□□□□ -2.68
RNU6-478P-201ENST00000363904 BMP2KLQ5H9B9 411 aa-1.68□□□□□ -2.68
RNU6-478P-201ENST00000363904 NKAIN2Q5VXU1 208 aa-1.68□□□□□ -2.68
RNU6-478P-201ENST00000363904 SBSNQ6UWP8 590 aa-1.68□□□□□ -2.68
RNU6-478P-201ENST00000363904 APTXQ7Z2E3 356 aaKnown RBP-1.68□□□□□ -2.68
RNU6-478P-201ENST00000363904 C16orf62Q7Z3J2 963 aa-1.68□□□□□ -2.68
RNU6-478P-201ENST00000363904 PEX26Q7Z412 305 aa-1.68□□□□□ -2.68
RNU6-478P-201ENST00000363904 GOLGA7Q7Z5G4 137 aa-1.68□□□□□ -2.68
RNU6-478P-201ENST00000363904 ANGPTL5Q86XS5 388 aa-1.68□□□□□ -2.68
RNU6-478P-201ENST00000363904 STHQ8IWL8 128 aa-1.68□□□□□ -2.68
RNU6-478P-201ENST00000363904 KIF2BQ8N4N8 673 aa-1.68□□□□□ -2.68
RNU6-478P-201ENST00000363904 CSGALNACT2Q8N6G5 542 aa-1.68□□□□□ -2.68
RNU6-478P-201ENST00000363904 OR1L1Q8NH94 360 aa-1.68□□□□□ -2.68
RNU6-478P-201ENST00000363904 RERGQ96A58 199 aaPredicted RBP-1.68□□□□□ -2.68
RNU6-478P-201ENST00000363904 NPY6RQ99463 290 aa-1.68□□□□□ -2.68
RNU6-478P-201ENST00000363904 PECRQ9BY49 303 aa-1.68□□□□□ -2.68
RNU6-478P-201ENST00000363904 OSBPL8Q9BZF1 889 aa-1.68□□□□□ -2.68
RNU6-478P-201ENST00000363904 ACPTQ9BZG2 426 aa-1.68□□□□□ -2.68
RNU6-478P-201ENST00000363904 CGNQ9P2M7 1197 aaKnown RBP-1.68□□□□□ -2.68
RNU6-478P-201ENST00000363904 STX18Q9P2W9 335 aaKnown RBP-1.68□□□□□ -2.68
RNU6-478P-201ENST00000363904 OR5V1Q9UGF6 321 aa-1.68□□□□□ -2.68
RNU6-478P-201ENST00000363904 SHPKQ9UHJ6 478 aa-1.68□□□□□ -2.68
RNU6-478P-201ENST00000363904 TRMT112Q9UI30 125 aaKnown RBP-1.68□□□□□ -2.68
RNU6-478P-201ENST00000363904 RAB22AQ9UL26 194 aa-1.68□□□□□ -2.68
RNU6-478P-201ENST00000363904 FARSAQ9Y285 508 aaKnown RBP-1.68□□□□□ -2.68
RNU6-478P-201ENST00000363904 COL4A5P29400 1685 aa-1.68□□□□□ -2.68
RNU6-478P-201ENST00000363904 ANKRD11Q6UB99 2663 aaPredicted RBP-1.68□□□□□ -2.68
RNU6-478P-201ENST00000363904 FANCIQ9NVI1 1328 aa-1.68□□□□□ -2.68
RNU6-478P-201ENST00000363904 KNTC1P50748 2209 aa-1.68□□□□□ -2.68
RNU6-478P-201ENST00000363904 A0A087WV48 116 aa-1.69□□□□□ -2.68
RNU6-478P-201ENST00000363904 TRAV8-6A0A0B4J262 113 aa-1.69□□□□□ -2.68
RNU6-478P-201ENST00000363904 TRAV39A0A0B4J263 110 aa-1.69□□□□□ -2.68
RNU6-478P-201ENST00000363904 A0A1B0GUS0 222 aa-1.69□□□□□ -2.68
RNU6-478P-201ENST00000363904 LOC102725191A0A1B0GVB3 256 aa-1.69□□□□□ -2.68
RNU6-478P-201ENST00000363904 hCG_1807616A0A1W2PRN6 198 aa-1.69□□□□□ -2.68
RNU6-478P-201ENST00000363904 ISPDA4D126 451 aa-1.69□□□□□ -2.68
RNU6-478P-201ENST00000363904 B4E171 279 aa-1.69□□□□□ -2.68
RNU6-478P-201ENST00000363904 PGLYRP1O75594 196 aaPredicted RBP-1.69□□□□□ -2.68
RNU6-478P-201ENST00000363904 BEST1O76090 585 aa-1.69□□□□□ -2.68
RNU6-478P-201ENST00000363904 MT-ND4P03905 459 aa-1.69□□□□□ -2.68
RNU6-478P-201ENST00000363904 FGF4P08620 206 aa-1.69□□□□□ -2.68
RNU6-478P-201ENST00000363904 CALM1P0DP23 149 aa-1.69□□□□□ -2.68
RNU6-478P-201ENST00000363904 CALM2P0DP24 149 aa-1.69□□□□□ -2.68
RNU6-478P-201ENST00000363904 CALM3P0DP25 149 aa-1.69□□□□□ -2.68
RNU6-478P-201ENST00000363904 CCNB1P14635 433 aa-1.69□□□□□ -2.68
RNU6-478P-201ENST00000363904 CTLA4P16410 223 aa-1.69□□□□□ -2.68
RNU6-478P-201ENST00000363904 RAB3BP20337 219 aa-1.69□□□□□ -2.68
RNU6-478P-201ENST00000363904 MUTP22033 750 aa-1.69□□□□□ -2.68
RNU6-478P-201ENST00000363904 MMP11P24347 488 aa-1.69□□□□□ -2.68
RNU6-478P-201ENST00000363904 FGF9P31371 208 aaPredicted RBP-1.69□□□□□ -2.68
RNU6-478P-201ENST00000363904 FOXN2P32314 431 aa-1.69□□□□□ -2.68
RNU6-478P-201ENST00000363904 GPR6P46095 362 aaPredicted RBP-1.69□□□□□ -2.68
RNU6-478P-201ENST00000363904 CNN1P51911 297 aaKnown RBP-1.69□□□□□ -2.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms