RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 ZYG11BQ9C0D3 744 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 DEFB127Q9H1M4 99 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 KIR3DX1Q9H7L2 352 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 IFT46Q9NQC8 304 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 CEMIPQ8WUJ3 1361 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 TRAV6A0A075B6T7 132 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 B4DXG7 233 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 H7C417 338 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 KMOO15229 486 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 HSBP1O75506 76 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 LCA5LO95447 670 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 IGHV3-13P01766 116 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 C2P06681 752 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 USF1P22415 310 aaPredicted RBP1.21□□□□□ -2.22
BRCA1-202ENST00000354071 PCK1P35558 622 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 EFNA3P52797 238 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 PLTPP55058 493 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 CHRNB3Q05901 458 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 TPBGQ13641 420 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 PIGHQ14442 188 aaPredicted RBP1.21□□□□□ -2.22
BRCA1-202ENST00000354071 HERPUD1Q15011 391 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 ARL6IP1Q15041 203 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 PRSS8Q16651 343 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 KYAT1Q16773 422 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 RSPO1Q2MKA7 263 aaPredicted RBP1.21□□□□□ -2.22
BRCA1-202ENST00000354071 STUMQ69YW2 141 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 OR5M10Q6IEU7 315 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 COMTD1Q86VU5 262 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 PLA2G4DQ86XP0 818 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 ERO1BQ86YB8 467 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 ANGPTL6Q8NI99 470 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 OR5P2Q8WZ92 322 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 FAM131CQ96AQ9 280 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 NRBF2Q96F24 287 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 JSRP1Q96MG2 331 aaPredicted RBP1.21□□□□□ -2.22
BRCA1-202ENST00000354071 TMEM175Q9BSA9 504 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 GABARAPL3Q9BY60 117 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 ULBP2Q9BZM5 246 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 DEFB129Q9H1M3 183 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 VCXQ9H320 206 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 PTGES2Q9H7Z7 377 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 EDA2RQ9HAV5 297 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 NTN4Q9HB63 628 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 OR2S2Q9NQN1 319 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 SAMSN1Q9NSI8 373 aaKnown RBP1.21□□□□□ -2.22
BRCA1-202ENST00000354071 XCL2Q9UBD3 114 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 MTFP1Q9UDX5 166 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 GOLT1BQ9Y3E0 138 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 ARAP2Q8WZ64 1704 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 BCL9O00512 1426 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 BCLAF3A2AJT9 711 aaKnown RBP1.21□□□□□ -2.22
BRCA1-202ENST00000354071 PDZK1P1A8MUH7 402 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 SLCO1B7G3V0H7 640 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 H7C423 109 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 GOLGA8RI6L899 631 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 ERI3O43414 337 aaKnown RBP1.21□□□□□ -2.22
BRCA1-202ENST00000354071 SRP72O76094 671 aaKnown RBP1.21□□□□□ -2.22
BRCA1-202ENST00000354071 CHTF8P0CG12 524 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 IL32P24001 234 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 UGT2B10P36537 528 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 GALR1P47211 349 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 SSR4P51571 173 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 DIO3P55073 304 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 MAP3K7CLP57077 242 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 KRTAP10-9P60411 292 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 SLAMF1Q13291 335 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 ITGB3BPQ13352 177 aaPredicted RBP1.21□□□□□ -2.22
BRCA1-202ENST00000354071 PSG5Q15238 335 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 ATP6AP1Q15904 470 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 TAL2Q16559 108 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 GSG1Q2KHT4 349 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 ZBED5Q49AG3 693 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 PAGE2BQ5JRK9 111 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 ZC2HC1BQ5TFG8 222 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 P2RY8Q86VZ1 359 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 PPP1R27Q86WC6 154 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 VKORC1L1Q8N0U8 176 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 SPAG16Q8N0X2 631 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 DUSP18Q8NEJ0 188 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 OR51A7Q8NH64 312 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 OR2AE1Q8NHA4 323 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 ZNF689Q96CS4 500 aaPredicted RBP1.21□□□□□ -2.22
BRCA1-202ENST00000354071 ZNF681Q96N22 645 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 FOXN4Q96NZ1 517 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 CYTH2Q99418 400 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 MICU1Q9BPX6 476 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 DEFB126Q9BYW3 111 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 AIG1Q9NVV5 245 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 MCUBQ9NWR8 336 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 RMND1Q9NWS8 449 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 ZNF580Q9UK33 172 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 SLC25A15Q9Y619 301 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 DENND4AQ7Z401 1863 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 PCDH11XQ9BZA7 1347 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 MYO9AB2RTY4 2548 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 A0A0G2JMZ2 1700 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 IGLV8-61A0A075B6I0 122 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 CCDC182A6NF36 153 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 ANKRD63C9JTQ0 380 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 H3BN98 237 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms