RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 PBOV1Q9GZY1 135 aa14.23□□□□□ -0.13
SHOX-201ENST00000334060 OBP2BQ9NPH6 170 aa14.23□□□□□ -0.13
SHOX-201ENST00000334060 R4GMQ9 66 aa14.23□□□□□ -0.13
SHOX-201ENST00000334060 IRGMA1A4Y4 181 aa14.22□□□□□ -0.13
SHOX-201ENST00000334060 ANKRD34BA5PLL1 514 aa14.22□□□□□ -0.13
SHOX-201ENST00000334060 P2RY10O00398 339 aa14.22□□□□□ -0.13
SHOX-201ENST00000334060 MT-ND5P03915 603 aa14.22□□□□□ -0.13
SHOX-201ENST00000334060 NR4A1P22736 598 aa14.22□□□□□ -0.13
SHOX-201ENST00000334060 PSMB9P28065 219 aa14.22□□□□□ -0.13
SHOX-201ENST00000334060 MPV17P39210 176 aa14.22□□□□□ -0.13
SHOX-201ENST00000334060 ZNF92Q03936 586 aa14.22□□□□□ -0.13
SHOX-201ENST00000334060 TSTQ16762 297 aaKnown RBP14.22□□□□□ -0.13
SHOX-201ENST00000334060 RNLSQ5VYX0 342 aa14.22□□□□□ -0.13
SHOX-201ENST00000334060 CCDC36Q8IYA8 594 aa14.22□□□□□ -0.13
SHOX-201ENST00000334060 ACBD4Q8NC06 268 aa14.22□□□□□ -0.13
SHOX-201ENST00000334060 TMEM203Q969S6 136 aa14.22□□□□□ -0.13
SHOX-201ENST00000334060 TRMT61AQ96FX7 289 aaKnown RBP14.22□□□□□ -0.13
SHOX-201ENST00000334060 PGLYRP3Q96LB9 341 aa14.22□□□□□ -0.13
SHOX-201ENST00000334060 FUNDC2Q9BWH2 189 aa14.22□□□□□ -0.13
SHOX-201ENST00000334060 PTTG3PQ9NZH4 202 aa14.22□□□□□ -0.13
SHOX-201ENST00000334060 AKAP6Q13023 2319 aa14.22□□□□□ -0.13
SHOX-201ENST00000334060 SHISA9B4DS77 424 aa14.22□□□□□ -0.13
SHOX-201ENST00000334060 LOC110117498-PIK3R3F6TDL0 507 aa14.22□□□□□ -0.13
SHOX-201ENST00000334060 PHYHO14832 338 aa14.22□□□□□ -0.13
SHOX-201ENST00000334060 CELP19835 753 aa14.22□□□□□ -0.13
SHOX-201ENST00000334060 ACTA2P62736 377 aa14.22□□□□□ -0.13
SHOX-201ENST00000334060 RPS25P62851 125 aaKnown RBP14.22□□□□□ -0.13
SHOX-201ENST00000334060 GRB2P62993 217 aaKnown RBP14.22□□□□□ -0.13
SHOX-201ENST00000334060 ACTG2P63267 376 aa14.22□□□□□ -0.13
SHOX-201ENST00000334060 CDK5R1Q15078 307 aa14.22□□□□□ -0.13
SHOX-201ENST00000334060 TBC1D28Q2M2D7 210 aa14.22□□□□□ -0.13
SHOX-201ENST00000334060 NCMAPQ5T1S8 102 aa14.22□□□□□ -0.13
SHOX-201ENST00000334060 UBE2UQ5VVX9 321 aa14.22□□□□□ -0.13
SHOX-201ENST00000334060 COLCA1Q6ZS62 124 aa14.22□□□□□ -0.13
SHOX-201ENST00000334060 MFSD4AQ8N468 514 aa14.22□□□□□ -0.13
SHOX-201ENST00000334060 SVOPQ8N4V2 548 aa14.22□□□□□ -0.13
SHOX-201ENST00000334060 OR51E1Q8TCB6 317 aa14.22□□□□□ -0.13
SHOX-201ENST00000334060 GTF3AQ92664 365 aaKnown RBP14.22□□□□□ -0.13
SHOX-201ENST00000334060 SGK3Q96BR1 496 aa14.22□□□□□ -0.13
SHOX-201ENST00000334060 MGLLQ99685 303 aa14.22□□□□□ -0.13
SHOX-201ENST00000334060 OR2J1Q9GZK6 312 aa14.22□□□□□ -0.13
SHOX-201ENST00000334060 MYEF2Q9P2K5 600 aaKnown RBP14.22□□□□□ -0.13
SHOX-201ENST00000334060 NDRG3Q9UGV2 375 aa14.22□□□□□ -0.13
SHOX-201ENST00000334060 OR52A1Q9UKL2 312 aa14.22□□□□□ -0.13
SHOX-201ENST00000334060 ANKRD61A6NGH8 418 aa14.21□□□□□ -0.13
SHOX-201ENST00000334060 OR4C45A6NMZ5 311 aa14.21□□□□□ -0.13
SHOX-201ENST00000334060 TGFBR1P36897 503 aa14.21□□□□□ -0.13
SHOX-201ENST00000334060 TPTEP56180 551 aa14.21□□□□□ -0.13
SHOX-201ENST00000334060 ARMCX4Q5H9R4 360 aa14.21□□□□□ -0.13
SHOX-201ENST00000334060 FAM220AQ7Z4H9 259 aa14.21□□□□□ -0.13
SHOX-201ENST00000334060 MED30Q96HR3 178 aa14.21□□□□□ -0.13
SHOX-201ENST00000334060 C1QTNF5Q9BXJ0 243 aa14.21□□□□□ -0.13
SHOX-201ENST00000334060 OR10A4Q9H209 315 aa14.21□□□□□ -0.13
SHOX-201ENST00000334060 CDH20Q9HBT6 801 aa14.21□□□□□ -0.13
SHOX-201ENST00000334060 DIABLOQ9NR28 239 aa14.21□□□□□ -0.13
SHOX-201ENST00000334060 COX5BP10606 129 aa14.2□□□□□ -0.14
SHOX-201ENST00000334060 SNTB2Q13425 540 aaKnown RBP14.2□□□□□ -0.14
SHOX-201ENST00000334060 TIGD6Q17RP2 521 aa14.2□□□□□ -0.14
SHOX-201ENST00000334060 FAM27D1Q5T7N8 215 aa14.2□□□□□ -0.14
SHOX-201ENST00000334060 TMPRSS11AQ6ZMR5 421 aa14.2□□□□□ -0.14
SHOX-201ENST00000334060 SLC7A5P1Q8MH63 180 aa14.2□□□□□ -0.14
SHOX-201ENST00000334060 SLC25A40Q8TBP6 338 aa14.2□□□□□ -0.14
SHOX-201ENST00000334060 SPTSSAQ969W0 71 aa14.2□□□□□ -0.14
SHOX-201ENST00000334060 DACH2Q96NX9 599 aa14.2□□□□□ -0.14
SHOX-201ENST00000334060 NKX3-1Q99801 234 aaPredicted RBP14.2□□□□□ -0.14
SHOX-201ENST00000334060 RNF167Q9H6Y7 350 aa14.2□□□□□ -0.14
SHOX-201ENST00000334060 A0A1B0GTI1 187 aa14.2□□□□□ -0.14
SHOX-201ENST00000334060 A0A1W2PPK0 400 aa14.2□□□□□ -0.14
SHOX-201ENST00000334060 ACKR3P25106 362 aa14.2□□□□□ -0.14
SHOX-201ENST00000334060 TGFBR2P37173 567 aa14.2□□□□□ -0.14
SHOX-201ENST00000334060 MMP16P51512 607 aa14.2□□□□□ -0.14
SHOX-201ENST00000334060 UCP2P55851 309 aa14.2□□□□□ -0.14
SHOX-201ENST00000334060 RPS11P62280 158 aaKnown RBP eCLIP14.2□□□□□ -0.14
SHOX-201ENST00000334060 ALKBH1Q13686 389 aaKnown RBP14.2□□□□□ -0.14
SHOX-201ENST00000334060 DMKNQ6E0U4 476 aaPredicted RBP14.2□□□□□ -0.14
SHOX-201ENST00000334060 DEGS2Q6QHC5 323 aa14.2□□□□□ -0.14
SHOX-201ENST00000334060 SLC22A25Q6T423 547 aa14.2□□□□□ -0.14
SHOX-201ENST00000334060 ANGPTL6Q8NI99 470 aa14.2□□□□□ -0.14
SHOX-201ENST00000334060 GRPEL2Q8TAA5 225 aa14.2□□□□□ -0.14
SHOX-201ENST00000334060 GHSRQ92847 366 aa14.2□□□□□ -0.14
SHOX-201ENST00000334060 DVL3Q92997 716 aaPredicted RBP14.2□□□□□ -0.14
SHOX-201ENST00000334060 PGAM5Q96HS1 289 aa14.2□□□□□ -0.14
SHOX-201ENST00000334060 TMED9Q9BVK6 235 aa14.2□□□□□ -0.14
SHOX-201ENST00000334060 PPIL3Q9H2H8 161 aaKnown RBP14.2□□□□□ -0.14
SHOX-201ENST00000334060 VPS13CQ709C8 3753 aa14.19□□□□□ -0.14
SHOX-201ENST00000334060 TRBV2A0A0J9YWF9 115 aa14.19□□□□□ -0.14
SHOX-201ENST00000334060 ZNF254O75437 659 aa14.19□□□□□ -0.14
SHOX-201ENST00000334060 PPP3CBP16298 524 aa14.19□□□□□ -0.14
SHOX-201ENST00000334060 NKX6-1P78426 367 aaPredicted RBP14.19□□□□□ -0.14
SHOX-201ENST00000334060 GK2Q14410 553 aaPredicted RBP14.19□□□□□ -0.14
SHOX-201ENST00000334060 CTF1Q16619 201 aa14.19□□□□□ -0.14
SHOX-201ENST00000334060 SP5Q6BEB4 398 aaPredicted RBP14.19□□□□□ -0.14
SHOX-201ENST00000334060 DRAM2Q6UX65 266 aa14.19□□□□□ -0.14
SHOX-201ENST00000334060 TMEM108Q6UXF1 575 aa14.19□□□□□ -0.14
SHOX-201ENST00000334060 SLC16A12Q6ZSM3 486 aa14.19□□□□□ -0.14
SHOX-201ENST00000334060 DPPA2Q7Z7J5 298 aa14.19□□□□□ -0.14
SHOX-201ENST00000334060 PHC2Q8IXK0 858 aa14.19□□□□□ -0.14
SHOX-201ENST00000334060 FAM169BQ8N8A8 192 aa14.19□□□□□ -0.14
SHOX-201ENST00000334060 BHLHE23Q8NDY6 225 aa14.19□□□□□ -0.14
SHOX-201ENST00000334060 OR1J1Q8NGS3 322 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms