RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 PIN1P1O15428 100 aa8.85□□□□□ -0.99
VIPAS39-201ENST00000327028 CFL1P23528 166 aaKnown RBP8.85□□□□□ -0.99
VIPAS39-201ENST00000327028 MYL9P24844 172 aa8.85□□□□□ -0.99
VIPAS39-201ENST00000327028 CALRP27797 417 aaKnown RBP8.85□□□□□ -0.99
VIPAS39-201ENST00000327028 MAGEB1P43366 347 aa8.85□□□□□ -0.99
VIPAS39-201ENST00000327028 SERPINB10P48595 397 aa8.85□□□□□ -0.99
VIPAS39-201ENST00000327028 NAAAQ02083 359 aa8.85□□□□□ -0.99
VIPAS39-201ENST00000327028 MALLQ13021 153 aa8.85□□□□□ -0.99
VIPAS39-201ENST00000327028 CNPY1Q3B7I2 92 aa8.85□□□□□ -0.99
VIPAS39-201ENST00000327028 HSD17B12Q53GQ0 312 aa8.85□□□□□ -0.99
VIPAS39-201ENST00000327028 FAM27D1Q5T7N8 215 aa8.85□□□□□ -0.99
VIPAS39-201ENST00000327028 ZNF101Q8IZC7 436 aa8.85□□□□□ -0.99
VIPAS39-201ENST00000327028 OR5L1Q8NGL2 311 aa8.85□□□□□ -0.99
VIPAS39-201ENST00000327028 OR14K1Q8NGZ2 314 aa8.85□□□□□ -0.99
VIPAS39-201ENST00000327028 TMEM106AQ96A25 262 aa8.85□□□□□ -0.99
VIPAS39-201ENST00000327028 FAM71F1Q96KD3 344 aaPredicted RBP8.85□□□□□ -0.99
VIPAS39-201ENST00000327028 DCSTAMPQ9H295 470 aa8.85□□□□□ -0.99
VIPAS39-201ENST00000327028 PPIL3Q9H2H8 161 aaKnown RBP8.85□□□□□ -0.99
VIPAS39-201ENST00000327028 V9GYS6 101 aa8.85□□□□□ -0.99
VIPAS39-201ENST00000327028 hCG_38984A0A1B0GV85 526 aa8.84□□□□□ -0.99
VIPAS39-201ENST00000327028 DHRS3O75911 302 aa8.84□□□□□ -0.99
VIPAS39-201ENST00000327028 NGFP01138 241 aa8.84□□□□□ -0.99
VIPAS39-201ENST00000327028 CALCRP30988 508 aa8.84□□□□□ -0.99
VIPAS39-201ENST00000327028 MTNR1BP49286 362 aa8.84□□□□□ -0.99
VIPAS39-201ENST00000327028 ZNF92Q03936 586 aa8.84□□□□□ -0.99
VIPAS39-201ENST00000327028 ALKBH2Q6NS38 261 aa8.84□□□□□ -0.99
VIPAS39-201ENST00000327028 WFDC8Q8IUA0 241 aa8.84□□□□□ -0.99
VIPAS39-201ENST00000327028 WFIKKN1Q96NZ8 548 aa8.84□□□□□ -0.99
VIPAS39-201ENST00000327028 SOX7Q9BT81 388 aa8.84□□□□□ -0.99
VIPAS39-201ENST00000327028 MED18Q9BUE0 208 aa8.84□□□□□ -0.99
VIPAS39-201ENST00000327028 ZNF275Q9NSD4 429 aaPredicted RBP8.84□□□□□ -0.99
VIPAS39-201ENST00000327028 STARD10Q9Y365 291 aa8.84□□□□□ -0.99
VIPAS39-201ENST00000327028 HCFC1P51610 2035 aa8.84□□□□□ -0.99
VIPAS39-201ENST00000327028 TRAV1-2A0A0B4J238 106 aa8.84□□□□□ -0.99
VIPAS39-201ENST00000327028 A0A1W2PPW3 197 aa8.84□□□□□ -0.99
VIPAS39-201ENST00000327028 DHRS7CA6NNS2 312 aa8.84□□□□□ -0.99
VIPAS39-201ENST00000327028 MTRF1O75570 445 aaKnown RBP8.84□□□□□ -0.99
VIPAS39-201ENST00000327028 IL1AP01583 271 aa8.84□□□□□ -0.99
VIPAS39-201ENST00000327028 FSTP19883 344 aa8.84□□□□□ -0.99
VIPAS39-201ENST00000327028 GRNP28799 593 aaKnown RBP8.84□□□□□ -0.99
VIPAS39-201ENST00000327028 UNQ6126/PRO20091Q6UXV3 157 aa8.84□□□□□ -0.99
VIPAS39-201ENST00000327028 ITFG2Q969R8 447 aa8.84□□□□□ -0.99
VIPAS39-201ENST00000327028 POFUT1Q9H488 388 aa8.84□□□□□ -0.99
VIPAS39-201ENST00000327028 PTTG3PQ9NZH4 202 aa8.84□□□□□ -0.99
VIPAS39-201ENST00000327028 ANKHD1Q8IWZ3 2542 aaKnown RBP8.84□□□□□ -0.99
VIPAS39-201ENST00000327028 A0A1W2PPK0 400 aa8.84□□□□□ -1
VIPAS39-201ENST00000327028 LMX1BO60663 402 aa8.84□□□□□ -1
VIPAS39-201ENST00000327028 ZNF20P17024 532 aa8.84□□□□□ -1
VIPAS39-201ENST00000327028 GSK3AP49840 483 aa8.84□□□□□ -1
VIPAS39-201ENST00000327028 UCP2P55851 309 aa8.84□□□□□ -1
VIPAS39-201ENST00000327028 PPP1CBP62140 327 aa8.84□□□□□ -1
VIPAS39-201ENST00000327028 OR8B8Q15620 311 aa8.84□□□□□ -1
VIPAS39-201ENST00000327028 TMEM108Q6UXF1 575 aa8.84□□□□□ -1
VIPAS39-201ENST00000327028 PARP16Q8N5Y8 322 aa8.84□□□□□ -1
VIPAS39-201ENST00000327028 C10orf35Q96D05 121 aa8.84□□□□□ -1
VIPAS39-201ENST00000327028 ZC3HAV1LQ96H79 300 aaKnown RBP8.84□□□□□ -1
VIPAS39-201ENST00000327028 NGBQ9NPG2 151 aa8.84□□□□□ -1
VIPAS39-201ENST00000327028 NDRG3Q9UGV2 375 aa8.84□□□□□ -1
VIPAS39-201ENST00000327028 MYO18BQ8IUG5 2567 aa8.83□□□□□ -1
VIPAS39-201ENST00000327028 SHISA3A0PJX4 238 aa8.83□□□□□ -1
VIPAS39-201ENST00000327028 CDRT1O95170 752 aa8.83□□□□□ -1
VIPAS39-201ENST00000327028 CRYAAP02489 173 aa8.83□□□□□ -1
VIPAS39-201ENST00000327028 FAM157BP0CG42 384 aa8.83□□□□□ -1
VIPAS39-201ENST00000327028 EPXP11678 715 aa8.83□□□□□ -1
VIPAS39-201ENST00000327028 TUBG1P23258 451 aa8.83□□□□□ -1
VIPAS39-201ENST00000327028 CD40P25942 277 aa8.83□□□□□ -1
VIPAS39-201ENST00000327028 SDC2P34741 201 aa8.83□□□□□ -1
VIPAS39-201ENST00000327028 RAD52P43351 418 aa8.83□□□□□ -1
VIPAS39-201ENST00000327028 FAM3AP98173 230 aa8.83□□□□□ -1
VIPAS39-201ENST00000327028 GK2Q14410 553 aaPredicted RBP8.83□□□□□ -1
VIPAS39-201ENST00000327028 ASPHD2Q6ICH7 369 aa8.83□□□□□ -1
VIPAS39-201ENST00000327028 MRPL21Q7Z2W9 205 aaKnown RBP8.83□□□□□ -1
VIPAS39-201ENST00000327028 C1orf174Q8IYL3 243 aa8.83□□□□□ -1
VIPAS39-201ENST00000327028 DYNC2LI1Q8TCX1 351 aa8.83□□□□□ -1
VIPAS39-201ENST00000327028 FGGYQ96C11 551 aa8.83□□□□□ -1
VIPAS39-201ENST00000327028 ORAI1Q96D31 301 aa8.83□□□□□ -1
VIPAS39-201ENST00000327028 ADAT3Q96EY9 351 aaPredicted RBP8.83□□□□□ -1
VIPAS39-201ENST00000327028 DCUN1D5Q9BTE7 237 aa8.83□□□□□ -1
VIPAS39-201ENST00000327028 REPIN1Q9BWE0 567 aaKnown RBP8.83□□□□□ -1
VIPAS39-201ENST00000327028 BCL2L14Q9BZR8 327 aa8.83□□□□□ -1
VIPAS39-201ENST00000327028 SLITRK2Q9H156 845 aa8.83□□□□□ -1
VIPAS39-201ENST00000327028 OR51B6Q9H340 312 aa8.83□□□□□ -1
VIPAS39-201ENST00000327028 PLEKHA1Q9HB21 404 aa8.83□□□□□ -1
VIPAS39-201ENST00000327028 TUBG2Q9NRH3 451 aa8.83□□□□□ -1
VIPAS39-201ENST00000327028 SNTG1Q9NSN8 517 aa8.83□□□□□ -1
VIPAS39-201ENST00000327028 CKLFQ9UBR5 152 aa8.83□□□□□ -1
VIPAS39-201ENST00000327028 CASKO14936 926 aa8.83□□□□□ -1
VIPAS39-201ENST00000327028 IGFBP3P17936 291 aaPredicted RBP8.83□□□□□ -1
VIPAS39-201ENST00000327028 SRMP19623 302 aa8.83□□□□□ -1
VIPAS39-201ENST00000327028 PTAFRP25105 342 aa8.83□□□□□ -1
VIPAS39-201ENST00000327028 THBS4P35443 961 aa8.83□□□□□ -1
VIPAS39-201ENST00000327028 MAP2K3P46734 347 aa8.83□□□□□ -1
VIPAS39-201ENST00000327028 FBXW12Q6X9E4 464 aa8.83□□□□□ -1
VIPAS39-201ENST00000327028 PGAP1Q75T13 922 aa8.83□□□□□ -1
VIPAS39-201ENST00000327028 TPRA1Q86W33 373 aa8.83□□□□□ -1
VIPAS39-201ENST00000327028 SEMA6DQ8NFY4 1073 aa8.83□□□□□ -1
VIPAS39-201ENST00000327028 TCF7L1Q9HCS4 588 aa8.83□□□□□ -1
VIPAS39-201ENST00000327028 NPDC1Q9NQX5 325 aaPredicted RBP8.83□□□□□ -1
VIPAS39-201ENST00000327028 TAS2R4Q9NYW5 299 aa8.83□□□□□ -1
VIPAS39-201ENST00000327028 PTTG2Q9NZH5 202 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms