RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 ZNF784Q8NCA9 323 aaPredicted RBP9.84□□□□□ -0.83
SNRNP200-201ENST00000323853 TTC9Q92623 222 aa9.84□□□□□ -0.83
SNRNP200-201ENST00000323853 TECTBQ96PL2 329 aa9.84□□□□□ -0.83
SNRNP200-201ENST00000323853 OR2W5A6NFC9 320 aa9.83□□□□□ -0.84
SNRNP200-201ENST00000323853 SLC17A2O00624 439 aa9.83□□□□□ -0.84
SNRNP200-201ENST00000323853 ADAM10O14672 748 aa9.83□□□□□ -0.84
SNRNP200-201ENST00000323853 TIAL1Q01085 375 aaKnown RBP eCLIP9.83□□□□□ -0.84
SNRNP200-201ENST00000323853 ARHGEF39Q8N4T4 335 aa9.83□□□□□ -0.84
SNRNP200-201ENST00000323853 SLC17A5Q9NRA2 495 aa9.83□□□□□ -0.84
SNRNP200-201ENST00000323853 ZNF355PQ9NSJ1 428 aa9.83□□□□□ -0.84
SNRNP200-201ENST00000323853 MED9Q9NWA0 146 aa9.83□□□□□ -0.84
SNRNP200-201ENST00000323853 COL4A1P02462 1669 aa9.83□□□□□ -0.84
SNRNP200-201ENST00000323853 PPM1DO15297 605 aa9.83□□□□□ -0.84
SNRNP200-201ENST00000323853 PI3P19957 117 aa9.83□□□□□ -0.84
SNRNP200-201ENST00000323853 GLRA1P23415 457 aa9.83□□□□□ -0.84
SNRNP200-201ENST00000323853 GPR12P47775 334 aa9.83□□□□□ -0.84
SNRNP200-201ENST00000323853 FAM199XQ6PEV8 388 aaPredicted RBP9.83□□□□□ -0.84
SNRNP200-201ENST00000323853 ZNF680Q8NEM1 530 aa9.83□□□□□ -0.84
SNRNP200-201ENST00000323853 EID2BQ96D98 161 aa9.83□□□□□ -0.84
SNRNP200-201ENST00000323853 TSPAN32Q96QS1 320 aa9.83□□□□□ -0.84
SNRNP200-201ENST00000323853 C1QTNF6Q9BXI9 259 aa9.83□□□□□ -0.84
SNRNP200-201ENST00000323853 GNG13Q9P2W3 67 aa9.83□□□□□ -0.84
SNRNP200-201ENST00000323853 PROCRQ9UNN8 238 aa9.83□□□□□ -0.84
SNRNP200-201ENST00000323853 PYCARD-AS1I3L0S3 204 aa9.83□□□□□ -0.84
SNRNP200-201ENST00000323853 BHLHE40O14503 412 aa9.83□□□□□ -0.84
SNRNP200-201ENST00000323853 GZMKP49863 264 aa9.83□□□□□ -0.84
SNRNP200-201ENST00000323853 FLI1Q01543 452 aaPredicted RBP9.83□□□□□ -0.84
SNRNP200-201ENST00000323853 KIAA0141Q14154 515 aaPredicted RBP9.83□□□□□ -0.84
SNRNP200-201ENST00000323853 ZC3HAV1LQ96H79 300 aaKnown RBP9.83□□□□□ -0.84
SNRNP200-201ENST00000323853 TAAR6Q96RI8 345 aa9.83□□□□□ -0.84
SNRNP200-201ENST00000323853 FOXQ1Q9C009 403 aa9.83□□□□□ -0.84
SNRNP200-201ENST00000323853 SLC23A1Q9UHI7 598 aa9.83□□□□□ -0.84
SNRNP200-201ENST00000323853 URGCP-MRPS24S4R325 110 aa9.83□□□□□ -0.84
SNRNP200-201ENST00000323853 HOXC4P09017 264 aaPredicted RBP9.83□□□□□ -0.84
SNRNP200-201ENST00000323853 ROBO4Q8WZ75 1007 aa9.83□□□□□ -0.84
SNRNP200-201ENST00000323853 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.83□□□□□ -0.84
SNRNP200-201ENST00000323853 PMS2P1A4D2B8 440 aa9.83□□□□□ -0.84
SNRNP200-201ENST00000323853 OR10J4P0C629 311 aa9.83□□□□□ -0.84
SNRNP200-201ENST00000323853 OPRM1P35372 400 aa9.83□□□□□ -0.84
SNRNP200-201ENST00000323853 FUT6P51993 359 aa9.83□□□□□ -0.84
SNRNP200-201ENST00000323853 SUB1P53999 127 aaKnown RBP eCLIP9.83□□□□□ -0.845e-7■■■■■ 33.7
SNRNP200-201ENST00000323853 ZNF687Q8N1G0 1237 aa9.83□□□□□ -0.84
SNRNP200-201ENST00000323853 C2CD4CQ8TF44 421 aa9.83□□□□□ -0.84
SNRNP200-201ENST00000323853 IP6K3Q96PC2 410 aa9.83□□□□□ -0.84
SNRNP200-201ENST00000323853 RIMS4Q9H426 269 aaPredicted RBP9.83□□□□□ -0.84
SNRNP200-201ENST00000323853 MMP25Q9NPA2 562 aa9.83□□□□□ -0.84
SNRNP200-201ENST00000323853 METTL12A8MUP2 240 aa9.83□□□□□ -0.84
SNRNP200-201ENST00000323853 OR5H8P0DN80 308 aa9.83□□□□□ -0.84
SNRNP200-201ENST00000323853 DEFA4P12838 97 aa9.83□□□□□ -0.84
SNRNP200-201ENST00000323853 B4GALT1P15291 398 aa9.83□□□□□ -0.84
SNRNP200-201ENST00000323853 HAAOP46952 286 aa9.83□□□□□ -0.84
SNRNP200-201ENST00000323853 GSK3AP49840 483 aa9.83□□□□□ -0.84
SNRNP200-201ENST00000323853 HABP2Q14520 560 aaPredicted RBP9.83□□□□□ -0.84
SNRNP200-201ENST00000323853 PXDC1Q5TGL8 231 aa9.83□□□□□ -0.84
SNRNP200-201ENST00000323853 ANKRD16Q6P6B7 361 aa9.83□□□□□ -0.84
SNRNP200-201ENST00000323853 CISD2Q8N5K1 135 aaKnown RBP9.83□□□□□ -0.84
SNRNP200-201ENST00000323853 OR2V1Q8NHB1 315 aa9.83□□□□□ -0.84
SNRNP200-201ENST00000323853 RBM38Q9H0Z9 239 aaKnown RBP9.83□□□□□ -0.84
SNRNP200-201ENST00000323853 SERGEFQ9UGK8 458 aa9.83□□□□□ -0.84
SNRNP200-201ENST00000323853 SHROOM3Q8TF72 1996 aa9.82□□□□□ -0.84
SNRNP200-201ENST00000323853 M0R1B8 84 aa9.82□□□□□ -0.84
SNRNP200-201ENST00000323853 PPP1R2P9O14990 202 aa9.82□□□□□ -0.84
SNRNP200-201ENST00000323853 CBR3O75828 277 aa9.82□□□□□ -0.84
SNRNP200-201ENST00000323853 IAPPP10997 89 aa9.82□□□□□ -0.84
SNRNP200-201ENST00000323853 MYF5P13349 255 aa9.82□□□□□ -0.84
SNRNP200-201ENST00000323853 FAM185AQ8N0U4 392 aa9.82□□□□□ -0.84
SNRNP200-201ENST00000323853 HPSE2Q8WWQ2 592 aa9.82□□□□□ -0.84
SNRNP200-201ENST00000323853 ST8SIA2Q92186 375 aa9.82□□□□□ -0.84
SNRNP200-201ENST00000323853 PSENENQ9NZ42 101 aa9.82□□□□□ -0.84
SNRNP200-201ENST00000323853 MYO18AQ92614 2054 aaKnown RBP9.82□□□□□ -0.84
SNRNP200-201ENST00000323853 ZNF891A8MT65 544 aaPredicted RBP9.82□□□□□ -0.84
SNRNP200-201ENST00000323853 NDUFB7P17568 137 aa9.82□□□□□ -0.84
SNRNP200-201ENST00000323853 ABCD3P28288 659 aa9.82□□□□□ -0.84
SNRNP200-201ENST00000323853 HMGA2P52926 109 aa9.82□□□□□ -0.84
SNRNP200-201ENST00000323853 INSL4Q14641 139 aa9.82□□□□□ -0.84
SNRNP200-201ENST00000323853 ZIC1Q15915 447 aa9.82□□□□□ -0.84
SNRNP200-201ENST00000323853 C8orf82Q6P1X6 216 aaPredicted RBP9.82□□□□□ -0.84
SNRNP200-201ENST00000323853 ZBTB44Q8NCP5 570 aa9.82□□□□□ -0.84
SNRNP200-201ENST00000323853 C10orf90Q96M02 699 aa9.82□□□□□ -0.84
SNRNP200-201ENST00000323853 PLEKHB1Q9UF11 243 aaPredicted RBP9.82□□□□□ -0.84
SNRNP200-201ENST00000323853 C20orf202A1L168 122 aa9.82□□□□□ -0.84
SNRNP200-201ENST00000323853 DHHO43323 396 aa9.82□□□□□ -0.84
SNRNP200-201ENST00000323853 CLN5O75503 358 aa9.82□□□□□ -0.84
SNRNP200-201ENST00000323853 WNT1P04628 370 aa9.82□□□□□ -0.84
SNRNP200-201ENST00000323853 NPBWR1P48145 328 aa9.82□□□□□ -0.84
SNRNP200-201ENST00000323853 TOMM34Q15785 309 aaPredicted RBP9.82□□□□□ -0.84
SNRNP200-201ENST00000323853 ZNF239Q16600 458 aaKnown RBP9.82□□□□□ -0.84
SNRNP200-201ENST00000323853 SPANXN5Q5MJ07 72 aa9.82□□□□□ -0.84
SNRNP200-201ENST00000323853 OR2W3Q7Z3T1 314 aa9.82□□□□□ -0.84
SNRNP200-201ENST00000323853 CDC20BQ86Y33 519 aa9.82□□□□□ -0.84
SNRNP200-201ENST00000323853 RGPD4Q7Z3J3 1758 aa9.82□□□□□ -0.84
SNRNP200-201ENST00000323853 ACKR3P25106 362 aa9.82□□□□□ -0.84
SNRNP200-201ENST00000323853 RAC1P63000 192 aa9.82□□□□□ -0.84
SNRNP200-201ENST00000323853 SPACA9Q96E40 222 aaPredicted RBP9.82□□□□□ -0.84
SNRNP200-201ENST00000323853 EGLN1Q9GZT9 426 aa9.82□□□□□ -0.84
SNRNP200-201ENST00000323853 ST3GAL6Q9Y274 331 aa9.82□□□□□ -0.84
SNRNP200-201ENST00000323853 SHISA8B8ZZ34 492 aa9.82□□□□□ -0.84
SNRNP200-201ENST00000323853 GPANK1O95872 356 aa9.82□□□□□ -0.84
SNRNP200-201ENST00000323853 OR2B11Q5JQS5 317 aa9.82□□□□□ -0.84
SNRNP200-201ENST00000323853 WDR38Q5JTN6 314 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms