RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 ZFC3H1O60293 1989 aaKnown RBP12.4□□□□□ -0.43
SPAST-201ENST00000315285 MEIKINA0A087WXM9 373 aa12.39□□□□□ -0.43
SPAST-201ENST00000315285 XRCC2O43543 280 aa12.39□□□□□ -0.43
SPAST-201ENST00000315285 MAGEB1P43366 347 aa12.39□□□□□ -0.43
SPAST-201ENST00000315285 EDDM3BP56851 147 aa12.39□□□□□ -0.43
SPAST-201ENST00000315285 ZNF85Q03923 595 aa12.39□□□□□ -0.43
SPAST-201ENST00000315285 FMODQ06828 376 aa12.39□□□□□ -0.43
SPAST-201ENST00000315285 ELFN2Q5R3F8 820 aa12.39□□□□□ -0.43
SPAST-201ENST00000315285 RDH5Q92781 318 aa12.39□□□□□ -0.43
SPAST-201ENST00000315285 BORCS7Q96B45 105 aa12.39□□□□□ -0.43
SPAST-201ENST00000315285 UHRF2Q96PU4 802 aa12.39□□□□□ -0.43
SPAST-201ENST00000315285 PLEKHA2Q9HB19 425 aa12.39□□□□□ -0.43
SPAST-201ENST00000315285 HEYLQ9NQ87 328 aaPredicted RBP12.39□□□□□ -0.43
SPAST-201ENST00000315285 V9GYH0 126 aa12.39□□□□□ -0.43
SPAST-201ENST00000315285 TPPPO94811 219 aa12.39□□□□□ -0.43
SPAST-201ENST00000315285 GPANK1O95872 356 aa12.39□□□□□ -0.43
SPAST-201ENST00000315285 EDDM3AQ14507 147 aa12.39□□□□□ -0.43
SPAST-201ENST00000315285 IRF3Q14653 427 aa12.39□□□□□ -0.43
SPAST-201ENST00000315285 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.39□□□□□ -0.43
SPAST-201ENST00000315285 ZFP82Q8N141 532 aa12.39□□□□□ -0.43
SPAST-201ENST00000315285 KCNE4Q8WWG9 221 aa12.39□□□□□ -0.43
SPAST-201ENST00000315285 TSPAN32Q96QS1 320 aa12.39□□□□□ -0.43
SPAST-201ENST00000315285 BCL2L11O43521 198 aa12.39□□□□□ -0.43
SPAST-201ENST00000315285 B4GALT1P15291 398 aa12.39□□□□□ -0.43
SPAST-201ENST00000315285 CLN3Q13286 438 aa12.39□□□□□ -0.43
SPAST-201ENST00000315285 CLLU1Q5K131 121 aa12.39□□□□□ -0.43
SPAST-201ENST00000315285 TMEM268Q5VZI3 342 aa12.39□□□□□ -0.43
SPAST-201ENST00000315285 ADAM5Q6NVV9 412 aa12.39□□□□□ -0.43
SPAST-201ENST00000315285 ARRDC1Q8N5I2 433 aa12.39□□□□□ -0.43
SPAST-201ENST00000315285 GPX8Q8TED1 209 aa12.39□□□□□ -0.43
SPAST-201ENST00000315285 HIPK2Q9H2X6 1198 aa12.39□□□□□ -0.43
SPAST-201ENST00000315285 FBXO4Q9UKT5 387 aa12.39□□□□□ -0.43
SPAST-201ENST00000315285 LRRC37AA6NMS7 1700 aa12.39□□□□□ -0.43
SPAST-201ENST00000315285 SEC16AO15027 2179 aa12.39□□□□□ -0.43
SPAST-201ENST00000315285 KNTC1P50748 2209 aa12.39□□□□□ -0.43
SPAST-201ENST00000315285 A0A1B0GTH9 108 aa12.39□□□□□ -0.43
SPAST-201ENST00000315285 SHISA8B8ZZ34 492 aa12.39□□□□□ -0.43
SPAST-201ENST00000315285 E5RGE8 158 aa12.39□□□□□ -0.43
SPAST-201ENST00000315285 TNFSF11O14788 317 aa12.39□□□□□ -0.43
SPAST-201ENST00000315285 LRP3O75074 770 aa12.39□□□□□ -0.43
SPAST-201ENST00000315285 PIAS2O75928 621 aa12.39□□□□□ -0.43
SPAST-201ENST00000315285 PPP1CAP62136 330 aa12.39□□□□□ -0.43
SPAST-201ENST00000315285 MYBPHQ13203 477 aa12.39□□□□□ -0.43
SPAST-201ENST00000315285 PNLIPRP3Q17RR3 467 aa12.39□□□□□ -0.43
SPAST-201ENST00000315285 TMEM128Q5BJH2 165 aa12.39□□□□□ -0.43
SPAST-201ENST00000315285 C1orf53Q5VUE5 145 aa12.39□□□□□ -0.43
SPAST-201ENST00000315285 DUSP18Q8NEJ0 188 aa12.39□□□□□ -0.43
SPAST-201ENST00000315285 NSG2Q9Y328 171 aa12.39□□□□□ -0.43
SPAST-201ENST00000315285 A0A096LPE4 126 aa12.38□□□□□ -0.43
SPAST-201ENST00000315285 A0A1W2PPZ6 126 aa12.38□□□□□ -0.43
SPAST-201ENST00000315285 C5orf49A4QMS7 147 aa12.38□□□□□ -0.43
SPAST-201ENST00000315285 RFPL4AA6NLU0 287 aa12.38□□□□□ -0.43
SPAST-201ENST00000315285 RFPL4AL1F8VTS6 287 aa12.38□□□□□ -0.43
SPAST-201ENST00000315285 AVPR2P30518 371 aa12.38□□□□□ -0.43
SPAST-201ENST00000315285 DMKNQ6E0U4 476 aaPredicted RBP12.38□□□□□ -0.43
SPAST-201ENST00000315285 CBLN3Q6UW01 205 aa12.38□□□□□ -0.43
SPAST-201ENST00000315285 INTS12Q96CB8 462 aaKnown RBP12.38□□□□□ -0.43
SPAST-201ENST00000315285 FAM60AQ9NP50 221 aa12.38□□□□□ -0.43
SPAST-201ENST00000315285 SERPINE3A8MV23 424 aa12.38□□□□□ -0.43
SPAST-201ENST00000315285 NTN1O95631 604 aa12.38□□□□□ -0.43
SPAST-201ENST00000315285 GLAP06280 429 aa12.38□□□□□ -0.43
SPAST-201ENST00000315285 GSG1Q2KHT4 349 aa12.38□□□□□ -0.43
SPAST-201ENST00000315285 ANKRD16Q6P6B7 361 aa12.38□□□□□ -0.43
SPAST-201ENST00000315285 TMEM92Q6UXU6 159 aa12.38□□□□□ -0.43
SPAST-201ENST00000315285 ZBTB44Q8NCP5 570 aa12.38□□□□□ -0.43
SPAST-201ENST00000315285 RTN4IP1Q8WWV3 396 aaPredicted RBP12.38□□□□□ -0.43
SPAST-201ENST00000315285 AK3Q9UIJ7 227 aa12.38□□□□□ -0.43
SPAST-201ENST00000315285 ALG1L2C9J202 215 aa12.38□□□□□ -0.43
SPAST-201ENST00000315285 SDHBP21912 280 aa12.38□□□□□ -0.43
SPAST-201ENST00000315285 PIGPP57054 158 aa12.38□□□□□ -0.43
SPAST-201ENST00000315285 RAB11AP62491 216 aa12.38□□□□□ -0.43
SPAST-201ENST00000315285 FXNQ16595 210 aa12.38□□□□□ -0.43
SPAST-201ENST00000315285 SLC25A26Q70HW3 274 aa12.38□□□□□ -0.43
SPAST-201ENST00000315285 PP6455Q8WZ26 134 aa12.38□□□□□ -0.43
SPAST-201ENST00000315285 ST3GAL6Q9Y274 331 aa12.38□□□□□ -0.43
SPAST-201ENST00000315285 LY75O60449 1722 aa12.38□□□□□ -0.43
SPAST-201ENST00000315285 CBR3O75828 277 aa12.38□□□□□ -0.43
SPAST-201ENST00000315285 PSMB3P49720 205 aa12.38□□□□□ -0.43
SPAST-201ENST00000315285 CCL11P51671 97 aa12.38□□□□□ -0.43
SPAST-201ENST00000315285 CLDN15P56746 228 aa12.38□□□□□ -0.43
SPAST-201ENST00000315285 ADIRFQ15847 76 aa12.38□□□□□ -0.43
SPAST-201ENST00000315285 SLC25A30Q5SVS4 291 aa12.38□□□□□ -0.43
SPAST-201ENST00000315285 FBXW5Q969U6 566 aa12.38□□□□□ -0.43
SPAST-201ENST00000315285 MOGAT1Q96PD6 335 aa12.38□□□□□ -0.43
SPAST-201ENST00000315285 GABRG3Q99928 467 aa12.38□□□□□ -0.43
SPAST-201ENST00000315285 ARV1Q9H2C2 271 aa12.38□□□□□ -0.43
SPAST-201ENST00000315285 GFOD1Q9NXC2 390 aa12.38□□□□□ -0.43
SPAST-201ENST00000315285 POLDIP2Q9Y2S7 368 aa12.38□□□□□ -0.43
SPAST-201ENST00000315285 A0A1W2PPV9 198 aa12.37□□□□□ -0.43
SPAST-201ENST00000315285 ZNF724A8MTY0 619 aa12.37□□□□□ -0.43
SPAST-201ENST00000315285 BHLHE40O14503 412 aa12.37□□□□□ -0.43
SPAST-201ENST00000315285 IGHA1P01876 353 aa12.37□□□□□ -0.43
SPAST-201ENST00000315285 SLC6A1P30531 599 aa12.37□□□□□ -0.43
SPAST-201ENST00000315285 ZFP36L2P47974 494 aaKnown RBP12.37□□□□□ -0.43
SPAST-201ENST00000315285 OR1L3Q8NH93 324 aa12.37□□□□□ -0.43
SPAST-201ENST00000315285 ST6GAL2Q96JF0 529 aa12.37□□□□□ -0.43
SPAST-201ENST00000315285 SLC52A3Q9NQ40 469 aa12.37□□□□□ -0.43
SPAST-201ENST00000315285 DLL4Q9NR61 685 aa12.37□□□□□ -0.43
SPAST-201ENST00000315285 URGCP-MRPS24S4R325 110 aa12.37□□□□□ -0.43
SPAST-201ENST00000315285 ZNF732B4DXR9 585 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms