RNA–Protein interactions for RNA: ENST00000296098.4

TRIM54-201, Transcript of tripartite motif containing 54, humanhuman

TSL 1 (best) BASIC

Gene TRIM54, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-201ENST00000296098 OR5H15A6NDH6 313 aa21.09■□□□□ 0.97
TRIM54-201ENST00000296098 LRRC3CA6NJW4 275 aa21.09■□□□□ 0.97
TRIM54-201ENST00000296098 SERPINA7P05543 415 aa21.09■□□□□ 0.97
TRIM54-201ENST00000296098 JMJD7P0C870 316 aa21.09■□□□□ 0.97
TRIM54-201ENST00000296098 SLC6A9P48067 706 aa21.09■□□□□ 0.97
TRIM54-201ENST00000296098 OR10R2Q8NGX6 335 aa21.09■□□□□ 0.97
TRIM54-201ENST00000296098 CHST6Q9GZX3 395 aa21.09■□□□□ 0.97
TRIM54-201ENST00000296098 CLEC4MQ9H2X3 399 aaPredicted RBP21.09■□□□□ 0.97
TRIM54-201ENST00000296098 FRYLO94915 3013 aa21.09■□□□□ 0.97
TRIM54-201ENST00000296098 PCSK5Q92824 1860 aa21.09■□□□□ 0.97
TRIM54-201ENST00000296098 WDFY3Q8IZQ1 3526 aa21.09■□□□□ 0.97
TRIM54-201ENST00000296098 E9PLN8 166 aa21.09■□□□□ 0.97
TRIM54-201ENST00000296098 IGLV3-1P01715 115 aa21.09■□□□□ 0.97
TRIM54-201ENST00000296098 OR3A4PP47883 348 aa21.09■□□□□ 0.97
TRIM54-201ENST00000296098 GGNQ86UU5 652 aa21.09■□□□□ 0.97
TRIM54-201ENST00000296098 OR4S1Q8NGB4 309 aa21.09■□□□□ 0.97
TRIM54-201ENST00000296098 NUDCD2Q8WVJ2 157 aa21.09■□□□□ 0.97
TRIM54-201ENST00000296098 P4HTMQ9NXG6 502 aa21.09■□□□□ 0.97
TRIM54-201ENST00000296098 LNP1A1A4G5 178 aa21.08■□□□□ 0.97
TRIM54-201ENST00000296098 C5orf63A6NC05 138 aa21.08■□□□□ 0.97
TRIM54-201ENST00000296098 DISC1C4P0D8 188 aa21.08■□□□□ 0.97
TRIM54-201ENST00000296098 F5H5K5 113 aa21.08■□□□□ 0.97
TRIM54-201ENST00000296098 GOSR2O14653 212 aa21.08■□□□□ 0.97
TRIM54-201ENST00000296098 SP9P0CG40 484 aa21.08■□□□□ 0.97
TRIM54-201ENST00000296098 UBE2MP61081 183 aaKnown RBP21.08■□□□□ 0.97
TRIM54-201ENST00000296098 RNASE10Q5GAN6 216 aaKnown RBP21.08■□□□□ 0.97
TRIM54-201ENST00000296098 UXS1Q8NBZ7 420 aa21.08■□□□□ 0.97
TRIM54-201ENST00000296098 LYZL4Q96KX0 146 aa21.08■□□□□ 0.97
TRIM54-201ENST00000296098 SLC6A7Q99884 636 aa21.08■□□□□ 0.97
TRIM54-201ENST00000296098 DPCDQ9BVM2 203 aaPredicted RBP21.08■□□□□ 0.97
TRIM54-201ENST00000296098 B3GNT2Q9NY97 397 aa21.08■□□□□ 0.97
TRIM54-201ENST00000296098 NCKAP5O14513 1909 aa21.08■□□□□ 0.96
TRIM54-201ENST00000296098 CFAP54Q96N23 3096 aa21.08■□□□□ 0.96
TRIM54-201ENST00000296098 GNB3P16520 340 aa21.07■□□□□ 0.96
TRIM54-201ENST00000296098 SCGB2B2Q4G0G5 96 aa21.07■□□□□ 0.96
TRIM54-201ENST00000296098 C1orf147Q96MC9 270 aaPredicted RBP21.07■□□□□ 0.96
TRIM54-201ENST00000296098 SFXN2Q96NB2 322 aa21.07■□□□□ 0.96
TRIM54-201ENST00000296098 TMPRSS13Q9BYE2 586 aa21.07■□□□□ 0.96
TRIM54-201ENST00000296098 IFT46Q9NQC8 304 aa21.07■□□□□ 0.96
TRIM54-201ENST00000296098 OPN4Q9UHM6 478 aa21.07■□□□□ 0.96
TRIM54-201ENST00000296098 A0A0U1RQV5 110 aa21.07■□□□□ 0.96
TRIM54-201ENST00000296098 M0R296 226 aa21.07■□□□□ 0.96
TRIM54-201ENST00000296098 RFPL3SP0C7P2 107 aa21.07■□□□□ 0.96
TRIM54-201ENST00000296098 ZNF35P13682 527 aa21.07■□□□□ 0.96
TRIM54-201ENST00000296098 H2BFSP57053 126 aa21.07■□□□□ 0.96
TRIM54-201ENST00000296098 MRPS34P82930 218 aaKnown RBP21.07■□□□□ 0.96
TRIM54-201ENST00000296098 EIF3IQ13347 325 aaKnown RBP21.07■□□□□ 0.96
TRIM54-201ENST00000296098 C2orf68Q2NKX9 166 aa21.07■□□□□ 0.96
TRIM54-201ENST00000296098 TMED4Q7Z7H5 227 aa21.07■□□□□ 0.96
TRIM54-201ENST00000296098 NAA40Q86UY6 237 aa21.07■□□□□ 0.96
TRIM54-201ENST00000296098 KCNG3Q8TAE7 436 aa21.07■□□□□ 0.96
TRIM54-201ENST00000296098 WDR89Q96FK6 387 aaPredicted RBP21.07■□□□□ 0.96
TRIM54-201ENST00000296098 GPER1Q99527 375 aa21.07■□□□□ 0.96
TRIM54-201ENST00000296098 NICN1Q9BSH3 213 aa21.07■□□□□ 0.96
TRIM54-201ENST00000296098 EDEM2Q9BV94 578 aa21.07■□□□□ 0.96
TRIM54-201ENST00000296098 SELENOIQ9C0D9 397 aa21.07■□□□□ 0.96
TRIM54-201ENST00000296098 LPAR5Q9H1C0 372 aa21.07■□□□□ 0.96
TRIM54-201ENST00000296098 MYOZ1Q9NP98 299 aaPredicted RBP21.07■□□□□ 0.96
TRIM54-201ENST00000296098 SLC2A8Q9NY64 477 aa21.07■□□□□ 0.96
TRIM54-201ENST00000296098 NCOA6Q14686 2063 aaPredicted RBP21.06■□□□□ 0.96
TRIM54-201ENST00000296098 PLSCR5A0PG75 271 aa21.06■□□□□ 0.96
TRIM54-201ENST00000296098 F5H5P2 479 aa21.06■□□□□ 0.96
TRIM54-201ENST00000296098 SLC22A5O76082 557 aa21.06■□□□□ 0.96
TRIM54-201ENST00000296098 MPC2O95563 127 aa21.06■□□□□ 0.96
TRIM54-201ENST00000296098 CHRM2P08172 466 aa21.06■□□□□ 0.96
TRIM54-201ENST00000296098 OR4E1P0C645 316 aa21.06■□□□□ 0.96
TRIM54-201ENST00000296098 OTX1P32242 354 aaPredicted RBP21.06■□□□□ 0.96
TRIM54-201ENST00000296098 CYB561P49447 251 aa21.06■□□□□ 0.96
TRIM54-201ENST00000296098 CARD18P57730 90 aa21.06■□□□□ 0.96
TRIM54-201ENST00000296098 ZNF528Q3MIS6 628 aa21.06■□□□□ 0.96
TRIM54-201ENST00000296098 ATPAF1Q5TC12 328 aaPredicted RBP21.06■□□□□ 0.96
TRIM54-201ENST00000296098 PRRT1Q99946 306 aa21.06■□□□□ 0.96
TRIM54-201ENST00000296098 FLVCR1Q9Y5Y0 555 aa21.06■□□□□ 0.96
TRIM54-201ENST00000296098 IGKV1-9A0A0C4DH69 117 aa21.05■□□□□ 0.96
TRIM54-201ENST00000296098 H3BUI4 141 aa21.05■□□□□ 0.96
TRIM54-201ENST00000296098 CDC14BO60729 498 aa21.05■□□□□ 0.96
TRIM54-201ENST00000296098 SIX6O95475 246 aa21.05■□□□□ 0.96
TRIM54-201ENST00000296098 MPIG6BO95866 241 aa21.05■□□□□ 0.96
TRIM54-201ENST00000296098 CSN2P05814 226 aa21.05■□□□□ 0.96
TRIM54-201ENST00000296098 C4BPBP20851 252 aa21.05■□□□□ 0.96
TRIM54-201ENST00000296098 THBS4P35443 961 aa21.05■□□□□ 0.96
TRIM54-201ENST00000296098 ZMYND11Q15326 602 aa21.05■□□□□ 0.96
TRIM54-201ENST00000296098 MPPED2Q15777 294 aa21.05■□□□□ 0.96
TRIM54-201ENST00000296098 NKPD1Q17RQ9 610 aa21.05■□□□□ 0.96
TRIM54-201ENST00000296098 GVQW1Q8N7I0 195 aa21.05■□□□□ 0.96
TRIM54-201ENST00000296098 TMEM104Q8NE00 496 aa21.05■□□□□ 0.96
TRIM54-201ENST00000296098 OR13C8Q8NGS7 320 aa21.05■□□□□ 0.96
TRIM54-201ENST00000296098 SSC4DQ8WTU2 575 aa21.05■□□□□ 0.96
TRIM54-201ENST00000296098 ELMOD3Q96FG2 381 aa21.05■□□□□ 0.96
TRIM54-201ENST00000296098 DEPPQ9NTK1 212 aa21.05■□□□□ 0.96
TRIM54-201ENST00000296098 PLEK2Q9NYT0 353 aa21.05■□□□□ 0.96
TRIM54-201ENST00000296098 SDK2Q58EX2 2172 aa21.05■□□□□ 0.96
TRIM54-201ENST00000296098 C9orf172C9J069 976 aa21.05■□□□□ 0.96
TRIM54-201ENST00000296098 M0R135 149 aa21.05■□□□□ 0.96
TRIM54-201ENST00000296098 M0R233 179 aa21.05■□□□□ 0.96
TRIM54-201ENST00000296098 DHRS3O75911 302 aa21.05■□□□□ 0.96
TRIM54-201ENST00000296098 IFNA7P01567 189 aa21.05■□□□□ 0.96
TRIM54-201ENST00000296098 APOC1P02654 83 aa21.05■□□□□ 0.96
TRIM54-201ENST00000296098 UBBP0CG47 229 aa21.05■□□□□ 0.96
TRIM54-201ENST00000296098 MPZP25189 248 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms