RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 HSD11B1P28845 292 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 SLC6A9P48067 706 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 CSNK1EP49674 416 aaKnown RBP9.25□□□□□ -0.93
SKA1-201ENST00000285116 QRFPP83859 136 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 GLO1Q04760 184 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 ERV3-1Q14264 604 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 ELAVL1Q15717 326 aaKnown RBP9.25□□□□□ -0.93
SKA1-201ENST00000285116 NKPD1Q17RQ9 610 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 RNASE10Q5GAN6 216 aaKnown RBP9.25□□□□□ -0.93
SKA1-201ENST00000285116 FAM76BQ5HYJ3 339 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 ZNF529Q6P280 563 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 RHOUQ7L0Q8 258 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 ZNF584Q8IVC4 421 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 CARFQ8N187 725 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 MMABQ96EY8 250 aaPredicted RBP9.25□□□□□ -0.93
SKA1-201ENST00000285116 NMES1Q9C002 83 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 TMEM184BQ9Y519 407 aaPredicted RBP9.25□□□□□ -0.93
SKA1-201ENST00000285116 SLCO1B1Q9Y6L6 691 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 EXPH5Q8NEV8 1989 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 THADAQ6YHU6 1953 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 TRBV23-1A0A0A0MS06 115 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 C5orf51A6NDU8 294 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 DBX1A6NMT0 343 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 CEACAM18A8MTB9 384 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 KCNAB3O43448 404 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 NDUFS6O75380 124 aaKnown RBP9.25□□□□□ -0.93
SKA1-201ENST00000285116 DUS4LO95620 317 aaKnown RBP9.25□□□□□ -0.93
SKA1-201ENST00000285116 BPNT1O95861 308 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 IGHV2-5P01817 119 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 CD5P06127 495 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 ZNF14P17017 642 aaPredicted RBP9.25□□□□□ -0.93
SKA1-201ENST00000285116 CPT2P23786 658 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 EIF2S3P41091 472 aaKnown RBP9.25□□□□□ -0.93
SKA1-201ENST00000285116 CX3CR1P49238 355 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 EIF2B1Q14232 305 aaKnown RBP9.25□□□□□ -0.93
SKA1-201ENST00000285116 DBX2Q6ZNG2 339 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 KCTD9Q7L273 389 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 C17orf82Q86X59 251 aaPredicted RBP9.25□□□□□ -0.93
SKA1-201ENST00000285116 ZNF441Q8N8Z8 693 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 PLPP7Q8NBV4 271 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 SLC26A10Q8NG04 563 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 ST7LQ8TDW4 575 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 ADAMTS17Q8TE56 1095 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 SLC25A44Q96H78 314 aaPredicted RBP9.25□□□□□ -0.93
SKA1-201ENST00000285116 GAS2L1Q99501 681 aaPredicted RBP9.25□□□□□ -0.93
SKA1-201ENST00000285116 GDF2Q9UK05 429 aaPredicted RBP9.25□□□□□ -0.93
SKA1-201ENST00000285116 MUC6Q6W4X9 2439 aa9.24□□□□□ -0.93
SKA1-201ENST00000285116 SPAG17Q6Q759 2223 aa9.24□□□□□ -0.93
SKA1-201ENST00000285116 METTL21EPA6NDL7 271 aa9.24□□□□□ -0.93
SKA1-201ENST00000285116 TLCD2A6NGC4 264 aa9.24□□□□□ -0.93
SKA1-201ENST00000285116 ZNF729A6NN14 1252 aaPredicted RBP9.24□□□□□ -0.93
SKA1-201ENST00000285116 TMEM150CB9EJG8 249 aa9.24□□□□□ -0.93
SKA1-201ENST00000285116 FTCDNL1E5RQL4 147 aa9.24□□□□□ -0.93
SKA1-201ENST00000285116 H3BSH0 61 aa9.24□□□□□ -0.93
SKA1-201ENST00000285116 SLC16A7O60669 478 aa9.24□□□□□ -0.93
SKA1-201ENST00000285116 GPANK1O95872 356 aa9.24□□□□□ -0.93
SKA1-201ENST00000285116 CSN2P05814 226 aa9.24□□□□□ -0.93
SKA1-201ENST00000285116 SPARCP09486 303 aa9.24□□□□□ -0.93
SKA1-201ENST00000285116 CTLA4P16410 223 aa9.24□□□□□ -0.93
SKA1-201ENST00000285116 VAMP1P23763 118 aa9.24□□□□□ -0.93
SKA1-201ENST00000285116 MMP16P51512 607 aa9.24□□□□□ -0.93
SKA1-201ENST00000285116 SLC26A5P58743 744 aa9.24□□□□□ -0.93
SKA1-201ENST00000285116 EBPQ15125 230 aaKnown RBP9.24□□□□□ -0.93
SKA1-201ENST00000285116 HMGN3Q15651 99 aa9.24□□□□□ -0.93
SKA1-201ENST00000285116 ODF4Q2M2E3 257 aa9.24□□□□□ -0.93
SKA1-201ENST00000285116 ACER2Q5QJU3 275 aa9.24□□□□□ -0.93
SKA1-201ENST00000285116 C1orf140Q5VVS0 124 aa9.24□□□□□ -0.93
SKA1-201ENST00000285116 EIF5AL1Q6IS14 154 aaKnown RBP9.24□□□□□ -0.93
SKA1-201ENST00000285116 DNM1P34Q6PK57 102 aa9.24□□□□□ -0.93
SKA1-201ENST00000285116 GRINAQ7Z429 371 aa9.24□□□□□ -0.93
SKA1-201ENST00000285116 TMEM151BQ8IW70 566 aa9.24□□□□□ -0.93
SKA1-201ENST00000285116 WDSUB1Q8N9V3 476 aa9.24□□□□□ -0.93
SKA1-201ENST00000285116 MAP3K3Q99759 626 aa9.24□□□□□ -0.93
SKA1-201ENST00000285116 KLHDC3Q9BQ90 382 aa9.24□□□□□ -0.93
SKA1-201ENST00000285116 RNF126Q9BV68 326 aa9.24□□□□□ -0.93
SKA1-201ENST00000285116 RTN4RQ9BZR6 473 aa9.24□□□□□ -0.93
SKA1-201ENST00000285116 TUBA4BQ9H853 241 aa9.24□□□□□ -0.93
SKA1-201ENST00000285116 MMP17Q9ULZ9 603 aa9.24□□□□□ -0.93
SKA1-201ENST00000285116 DMRT1Q9Y5R6 373 aa9.24□□□□□ -0.93
SKA1-201ENST00000285116 POMT1Q9Y6A1 747 aa9.24□□□□□ -0.93
SKA1-201ENST00000285116 COL12A1Q99715 3063 aa9.24□□□□□ -0.93
SKA1-201ENST00000285116 TMED7-TICAM2A0A0A6YYA0 188 aa9.24□□□□□ -0.93
SKA1-201ENST00000285116 C13orf42A0A1B0GVH6 325 aa9.24□□□□□ -0.93
SKA1-201ENST00000285116 A0A1W2PPE3 182 aa9.24□□□□□ -0.93
SKA1-201ENST00000285116 TXNL1O43396 289 aa9.24□□□□□ -0.93
SKA1-201ENST00000285116 FBXO24O75426 580 aa9.24□□□□□ -0.93
SKA1-201ENST00000285116 OR6A2O95222 327 aa9.24□□□□□ -0.93
SKA1-201ENST00000285116 CTSEP14091 401 aa9.24□□□□□ -0.93
SKA1-201ENST00000285116 RPS27P42677 84 aaKnown RBP9.24□□□□□ -0.93
SKA1-201ENST00000285116 TAS2R31P59538 309 aa9.24□□□□□ -0.93
SKA1-201ENST00000285116 EIF5AP63241 154 aaKnown RBP9.24□□□□□ -0.93
SKA1-201ENST00000285116 EIF3IQ13347 325 aaKnown RBP9.24□□□□□ -0.93
SKA1-201ENST00000285116 LPAL2Q16609 132 aa9.24□□□□□ -0.93
SKA1-201ENST00000285116 ZNF585AQ6P3V2 769 aa9.24□□□□□ -0.93
SKA1-201ENST00000285116 CD163Q86VB7 1156 aa9.24□□□□□ -0.93
SKA1-201ENST00000285116 ZNF321PQ8N8H1 164 aa9.24□□□□□ -0.93
SKA1-201ENST00000285116 ZSCAN4Q8NAM6 433 aaPredicted RBP9.24□□□□□ -0.93
SKA1-201ENST00000285116 KDF1Q8NAX2 398 aaPredicted RBP9.24□□□□□ -0.93
SKA1-201ENST00000285116 CASTOR1Q8WTX7 329 aa9.24□□□□□ -0.93
SKA1-201ENST00000285116 MRGPRFQ96AM1 343 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms