RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 PATE4P0C8F1 98 aa16.19■□□□□ 0.18
HOXC11-201ENST00000243082 ZNF32P17041 273 aa16.19■□□□□ 0.18
HOXC11-201ENST00000243082 STOMP27105 288 aa16.19■□□□□ 0.18
HOXC11-201ENST00000243082 RSPO4Q2I0M5 234 aaPredicted RBP16.19■□□□□ 0.18
HOXC11-201ENST00000243082 ZFP62Q8NB50 900 aaPredicted RBP16.19■□□□□ 0.18
HOXC11-201ENST00000243082 ACBD4Q8NC06 268 aa16.19■□□□□ 0.18
HOXC11-201ENST00000243082 BEST4Q8NFU0 473 aa16.19■□□□□ 0.18
HOXC11-201ENST00000243082 OR11H7Q8NGC8 314 aa16.19■□□□□ 0.18
HOXC11-201ENST00000243082 OR4D10Q8NGI6 311 aa16.19■□□□□ 0.18
HOXC11-201ENST00000243082 CAPSLQ8WWF8 208 aa16.19■□□□□ 0.18
HOXC11-201ENST00000243082 MS4A3Q96HJ5 214 aa16.19■□□□□ 0.18
HOXC11-201ENST00000243082 ZMAT3Q9HA38 289 aaKnown RBP16.19■□□□□ 0.18
HOXC11-201ENST00000243082 BEX1Q9HBH7 125 aa16.19■□□□□ 0.18
HOXC11-201ENST00000243082 NOX3Q9HBY0 568 aa16.19■□□□□ 0.18
HOXC11-201ENST00000243082 NOSIPQ9Y314 301 aaKnown RBP16.19■□□□□ 0.18
HOXC11-201ENST00000243082 METTL21EPA6NDL7 271 aa16.18■□□□□ 0.18
HOXC11-201ENST00000243082 TMEM14DPA8MWL7 114 aa16.18■□□□□ 0.18
HOXC11-201ENST00000243082 PRR33A8MZF0 331 aa16.18■□□□□ 0.18
HOXC11-201ENST00000243082 DHRS3O75911 302 aa16.18■□□□□ 0.18
HOXC11-201ENST00000243082 LPLP06858 475 aa16.18■□□□□ 0.18
HOXC11-201ENST00000243082 VEGFCP49767 419 aa16.18■□□□□ 0.18
HOXC11-201ENST00000243082 PPIAP62937 165 aaKnown RBP16.18■□□□□ 0.18
HOXC11-201ENST00000243082 MAB21L1Q13394 359 aa16.18■□□□□ 0.18
HOXC11-201ENST00000243082 SNAI3Q3KNW1 292 aa16.18■□□□□ 0.18
HOXC11-201ENST00000243082 TSPO2Q5TGU0 170 aa16.18■□□□□ 0.18
HOXC11-201ENST00000243082 CD276Q5ZPR3 534 aa16.18■□□□□ 0.18
HOXC11-201ENST00000243082 AWAT2Q6E213 333 aa16.18■□□□□ 0.18
HOXC11-201ENST00000243082 CDH24Q86UP0 819 aa16.18■□□□□ 0.18
HOXC11-201ENST00000243082 VASH2Q86V25 355 aa16.18■□□□□ 0.18
HOXC11-201ENST00000243082 LIX1LQ8IVB5 337 aa16.18■□□□□ 0.18
HOXC11-201ENST00000243082 MEIOBQ8N635 442 aa16.18■□□□□ 0.18
HOXC11-201ENST00000243082 OR1F12Q8NHA8 337 aa16.18■□□□□ 0.18
HOXC11-201ENST00000243082 FGFBP3Q8TAT2 258 aa16.18■□□□□ 0.18
HOXC11-201ENST00000243082 FAM46BQ96A09 425 aa16.18■□□□□ 0.18
HOXC11-201ENST00000243082 C1orf147Q96MC9 270 aaPredicted RBP16.18■□□□□ 0.18
HOXC11-201ENST00000243082 SCPEP1Q9HB40 452 aa16.18■□□□□ 0.18
HOXC11-201ENST00000243082 OR6C6A6NF89 314 aa16.18■□□□□ 0.18
HOXC11-201ENST00000243082 ARPC1BO15143 372 aaKnown RBP16.18■□□□□ 0.18
HOXC11-201ENST00000243082 ICMTO60725 284 aa16.18■□□□□ 0.18
HOXC11-201ENST00000243082 NDUFB6O95139 128 aa16.18■□□□□ 0.18
HOXC11-201ENST00000243082 HPXP02790 462 aa16.18■□□□□ 0.18
HOXC11-201ENST00000243082 YES1P07947 543 aa16.18■□□□□ 0.18
HOXC11-201ENST00000243082 GTF2F2P13984 249 aa16.18■□□□□ 0.18
HOXC11-201ENST00000243082 CD46P15529 392 aa16.18■□□□□ 0.18
HOXC11-201ENST00000243082 FAUP35544 74 aaKnown RBP16.18■□□□□ 0.18
HOXC11-201ENST00000243082 HGFACQ04756 655 aa16.18■□□□□ 0.18
HOXC11-201ENST00000243082 SCRN3Q0VDG4 424 aa16.18■□□□□ 0.18
HOXC11-201ENST00000243082 ECH1Q13011 328 aa16.18■□□□□ 0.18
HOXC11-201ENST00000243082 SRSF6Q13247 344 aaKnown RBP16.18■□□□□ 0.18
HOXC11-201ENST00000243082 KRTAP27-1Q3LI81 207 aa16.18■□□□□ 0.18
HOXC11-201ENST00000243082 SFRP5Q5T4F7 317 aa16.18■□□□□ 0.18
HOXC11-201ENST00000243082 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.18■□□□□ 0.18
HOXC11-201ENST00000243082 HAS2Q92819 552 aa16.18■□□□□ 0.18
HOXC11-201ENST00000243082 ZNF552Q9H707 407 aaPredicted RBP16.18■□□□□ 0.18
HOXC11-201ENST00000243082 NKX2-8O15522 239 aa16.17■□□□□ 0.18
HOXC11-201ENST00000243082 MRPL33O75394 65 aaKnown RBP16.17■□□□□ 0.18
HOXC11-201ENST00000243082 C1QBP02746 253 aa16.17■□□□□ 0.18
HOXC11-201ENST00000243082 CD3DP04234 171 aa16.17■□□□□ 0.18
HOXC11-201ENST00000243082 FCER2P06734 321 aa16.17■□□□□ 0.18
HOXC11-201ENST00000243082 THBS4P35443 961 aa16.17■□□□□ 0.18
HOXC11-201ENST00000243082 OR3A4PP47883 348 aa16.17■□□□□ 0.18
HOXC11-201ENST00000243082 MRPS15P82914 257 aaKnown RBP16.17■□□□□ 0.18
HOXC11-201ENST00000243082 PSG4Q00888 419 aa16.17■□□□□ 0.18
HOXC11-201ENST00000243082 BCL2A1Q16548 175 aa16.17■□□□□ 0.18
HOXC11-201ENST00000243082 ZNF260Q3ZCT1 412 aa16.17■□□□□ 0.18
HOXC11-201ENST00000243082 RAB12Q6IQ22 244 aa16.17■□□□□ 0.18
HOXC11-201ENST00000243082 GLIPR1L1Q6UWM5 242 aa16.17■□□□□ 0.18
HOXC11-201ENST00000243082 DRAM2Q6UX65 266 aa16.17■□□□□ 0.18
HOXC11-201ENST00000243082 SKA3Q8IX90 412 aa16.17■□□□□ 0.18
HOXC11-201ENST00000243082 TUSC5Q8IXB3 177 aa16.17■□□□□ 0.18
HOXC11-201ENST00000243082 AKR7LQ8NHP1 331 aa16.17■□□□□ 0.18
HOXC11-201ENST00000243082 AQP3Q92482 292 aa16.17■□□□□ 0.18
HOXC11-201ENST00000243082 SGK3Q96BR1 496 aa16.17■□□□□ 0.18
HOXC11-201ENST00000243082 SLCO5A1Q9H2Y9 848 aa16.17■□□□□ 0.18
HOXC11-201ENST00000243082 ACKR4Q9NPB9 350 aa16.17■□□□□ 0.18
HOXC11-201ENST00000243082 ZNF224Q9NZL3 707 aa16.17■□□□□ 0.18
HOXC11-201ENST00000243082 MRPS28Q9Y2Q9 187 aaKnown RBP16.17■□□□□ 0.18
HOXC11-201ENST00000243082 TIMM10BQ9Y5J6 103 aa16.17■□□□□ 0.18
HOXC11-201ENST00000243082 SYNGR4O95473 234 aa16.16■□□□□ 0.18
HOXC11-201ENST00000243082 IGHV3-9P01782 118 aa16.16■□□□□ 0.18
HOXC11-201ENST00000243082 HCKP08631 526 aa16.16■□□□□ 0.18
HOXC11-201ENST00000243082 AKAIN1P0CW23 69 aa16.16■□□□□ 0.18
HOXC11-201ENST00000243082 PRF1P14222 555 aa16.16■□□□□ 0.18
HOXC11-201ENST00000243082 GZMKP49863 264 aa16.16■□□□□ 0.18
HOXC11-201ENST00000243082 RRADP55042 308 aa16.16■□□□□ 0.18
HOXC11-201ENST00000243082 ACTBP60709 375 aa16.16■□□□□ 0.18
HOXC11-201ENST00000243082 ACTG1P63261 375 aa16.16■□□□□ 0.18
HOXC11-201ENST00000243082 CRIP3Q6Q6R5 217 aa16.16■□□□□ 0.18
HOXC11-201ENST00000243082 SLC16A14Q7RTX9 510 aa16.16■□□□□ 0.18
HOXC11-201ENST00000243082 OR52H1Q8NGJ2 320 aa16.16■□□□□ 0.18
HOXC11-201ENST00000243082 FNDC9Q8TBE3 224 aa16.16■□□□□ 0.18
HOXC11-201ENST00000243082 DVL3Q92997 716 aaPredicted RBP16.16■□□□□ 0.18
HOXC11-201ENST00000243082 CMBLQ96DG6 245 aa16.16■□□□□ 0.18
HOXC11-201ENST00000243082 LINC00470Q9BZP3 86 aa16.16■□□□□ 0.18
HOXC11-201ENST00000243082 WNT5BQ9H1J7 359 aa16.16■□□□□ 0.18
HOXC11-201ENST00000243082 OR10A2Q9H208 303 aa16.16■□□□□ 0.18
HOXC11-201ENST00000243082 BOLA1Q9Y3E2 137 aa16.16■□□□□ 0.18
HOXC11-201ENST00000243082 LIPGQ9Y5X9 500 aa16.16■□□□□ 0.18
HOXC11-201ENST00000243082 TMEM235A6NFC5 223 aa16.16■□□□□ 0.18
HOXC11-201ENST00000243082 SMLR1H3BR10 107 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms