RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Kcnn3P58391 732 aa9.38□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Cd3eapQ76KJ5 399 aa9.38□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Sez6Q7TSK2 991 aa9.38□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Tmprss7Q8BIK6 829 aa9.38□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Smim37Q8BT35 56 aa9.38□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Nt5mQ8VCE6 220 aa9.38□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Rpp25Q91WE3 199 aa9.38□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Ear6Q923L7 155 aa9.38□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Olfr642Q924X8 314 aa9.38□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Tmem216Q9CQC4 141 aa9.38□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Baz2bA2AUY4 2123 aa9.38□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Olfr663A0A1B0GSI9 319 aa9.38□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Olfr588-ps1A0A1B0GSZ2 313 aa9.38□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 A0A286YCH8 300 aa9.38□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 3110040M04RikA0A286YDK0 300 aa9.38□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 A0A286YE43 300 aa9.38□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Lipo5F6QKH6 233 aa9.38□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Vmn1r122K7N726 305 aa9.38□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Zfp955bL7N232 545 aa9.38□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Cops3O88543 423 aa9.38□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Ccl20O89093 97 aa9.38□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Tpi1P17751 299 aaKnown RBP9.38□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Olfr145Q60882 310 aa9.38□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Tceal3Q8R0A5 200 aa9.38□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Olfr97Q8VFE1 310 aa9.38□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 TapbpQ9R233 465 aa9.38□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Atad5Q4QY64 1826 aa9.38□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Ttc6G3UYY4 1857 aa9.38□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Esp16A8R0U9 85 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Alx3O70137 343 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Hoxb5P09079 269 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Map2k6P70236 334 aaKnown RBP9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 ArhgdibQ61599 200 aaKnown RBP9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Tgoln1Q62313 353 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Comtd1Q8BIG7 262 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Rae1Q8C570 368 aaKnown RBP9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Olfr502Q8VG09 314 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Olfr669Q8VGU9 317 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Olfr656Q8VGX9 329 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Tmem19Q91W52 336 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Lnx2Q91XL2 687 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 PecrQ99MZ7 303 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Olfr710Q9EP55 310 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Tgm1Q9JLF6 815 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Lhx6Q9R1R0 363 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Kcnj16Q9Z307 419 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Shroom3Q9QXN0 1986 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Nlgn4lB0F2B4 945 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Zfp97E9PZP6 546 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Rdh16f1E9Q9P8 317 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Zfp960L7N267 546 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Bcl2P10417 236 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 P2rx1P51576 399 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Ltbp3Q61810 1268 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Lcn4Q62472 185 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Ly6eQ64253 130 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Olfr1299Q7TQX5 312 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Bdh1Q80XN0 343 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Ino80cQ8BHA0 191 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Cadm4Q8R464 388 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Olfr1388Q8VFA3 311 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Olfr1048Q8VGS2 320 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Ttc3O88196 1979 aaKnown RBP9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Cacna1fQ9JIS7 1985 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Olfr65A0A1B0GSF4 315 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Fnd3c2A2AP83 941 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Morn1A2RTS7 477 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Olfr547E9PXN3 311 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Znf296E9Q6W4 445 aaKnown RBP9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Gm37240E9QAY5 252 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Gm2075J3QMW5 144 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Sec61a1P61620 476 aaKnown RBP9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Kcnab1P63143 401 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 SgcaP82350 387 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 BglapP86546 95 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Bglap2P86547 95 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 C1qaP98086 245 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Scand1Q2M4I6 142 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Lyg2Q3V1I0 213 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 4930512M02RikQ5SQK8 218 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Hormad2Q5SQP1 306 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Il11ra1Q64385 432 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 SrmQ64674 302 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 DraxinQ6PAL1 343 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Rrnad1Q8BZG5 475 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 PigmQ8C2R7 423 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 SbsnQ8CIT9 700 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Commd1Q8K4M5 188 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Slc48a1Q9D8M3 146 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Tmem225Q9D9S2 230 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 P2ry14Q9ESG6 338 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Rgs21V9GXQ3 152 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Ighv1-24A0A0A6YY24 117 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Rhox3gB9EJQ9 160 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 CatsperdE9Q9F6 805 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Zfp988F6VKC7 633 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Gm8265K7N6Y8 158 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Sbk2P0C5K1 362 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Igfbp1P47876 272 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Gabrb1P50571 474 aa9.37□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 23.3 ms