RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 NANOS3P60323 173 aaKnown RBP10.25□□□□□ -0.77
CLN6-217ENST00000636964 CDK5R1Q15078 307 aa10.25□□□□□ -0.77
CLN6-217ENST00000636964 ODF4Q2M2E3 257 aa10.25□□□□□ -0.77
CLN6-217ENST00000636964 TMEM176BQ3YBM2 270 aaPredicted RBP10.25□□□□□ -0.77
CLN6-217ENST00000636964 HES3Q5TGS1 186 aa10.25□□□□□ -0.77
CLN6-217ENST00000636964 EIF4E3Q8N5X7 224 aaKnown RBP10.25□□□□□ -0.77
CLN6-217ENST00000636964 METTL9Q9H1A3 318 aa10.25□□□□□ -0.77
CLN6-217ENST00000636964 PTGES2Q9H7Z7 377 aa10.25□□□□□ -0.77
CLN6-217ENST00000636964 KCNG2Q9UJ96 466 aa10.25□□□□□ -0.77
CLN6-217ENST00000636964 OR2M5A3KFT3 312 aa10.25□□□□□ -0.77
CLN6-217ENST00000636964 FAM221AA4D161 298 aa10.25□□□□□ -0.77
CLN6-217ENST00000636964 LIPT2A6NK58 231 aa10.25□□□□□ -0.77
CLN6-217ENST00000636964 KDM4BO94953 1096 aa10.25□□□□□ -0.77
CLN6-217ENST00000636964 S100A8P05109 93 aa10.25□□□□□ -0.77
CLN6-217ENST00000636964 MLF1P58340 268 aa10.25□□□□□ -0.77
CLN6-217ENST00000636964 RPS15P62841 145 aaKnown RBP10.25□□□□□ -0.77
CLN6-217ENST00000636964 SLC22A10Q63ZE4 541 aa10.25□□□□□ -0.77
CLN6-217ENST00000636964 SFRP4Q6FHJ7 346 aaPredicted RBP10.25□□□□□ -0.77
CLN6-217ENST00000636964 SYS1Q8N2H4 156 aa10.25□□□□□ -0.77
CLN6-217ENST00000636964 BSCL2Q96G97 398 aaPredicted RBP10.25□□□□□ -0.77
CLN6-217ENST00000636964 PROK2Q9HC23 129 aa10.25□□□□□ -0.77
CLN6-217ENST00000636964 ASCL3Q9NQ33 180 aa10.25□□□□□ -0.77
CLN6-217ENST00000636964 SERINC1Q9NRX5 453 aa10.25□□□□□ -0.77
CLN6-217ENST00000636964 P4HTMQ9NXG6 502 aa10.25□□□□□ -0.77
CLN6-217ENST00000636964 MRM2Q9UI43 246 aaKnown RBP10.25□□□□□ -0.77
CLN6-217ENST00000636964 LAMA5O15230 3695 aa10.25□□□□□ -0.77
CLN6-217ENST00000636964 NPIPA5E9PKD4 350 aa10.25□□□□□ -0.77
CLN6-217ENST00000636964 J3QW42 95 aa10.25□□□□□ -0.77
CLN6-217ENST00000636964 OGG1O15527 345 aa10.25□□□□□ -0.77
CLN6-217ENST00000636964 ZNF208O43345 1280 aa10.25□□□□□ -0.77
CLN6-217ENST00000636964 TGM6O95932 706 aa10.25□□□□□ -0.77
CLN6-217ENST00000636964 HPP00738 406 aa10.25□□□□□ -0.77
CLN6-217ENST00000636964 RLN2P04090 185 aa10.25□□□□□ -0.77
CLN6-217ENST00000636964 C2orf68Q2NKX9 166 aa10.25□□□□□ -0.77
CLN6-217ENST00000636964 SFXN4Q6P4A7 337 aa10.25□□□□□ -0.77
CLN6-217ENST00000636964 SCARB1Q8WTV0 552 aa10.25□□□□□ -0.77
CLN6-217ENST00000636964 ACOT12Q8WYK0 555 aa10.25□□□□□ -0.77
CLN6-217ENST00000636964 SLC25A28Q96A46 364 aa10.25□□□□□ -0.77
CLN6-217ENST00000636964 CLUHP3Q96NS8 147 aa10.25□□□□□ -0.77
CLN6-217ENST00000636964 OR14A2Q96R54 314 aa10.25□□□□□ -0.77
CLN6-217ENST00000636964 INTS14Q96SY0 518 aa10.25□□□□□ -0.77
CLN6-217ENST00000636964 CHST11Q9NPF2 352 aa10.25□□□□□ -0.77
CLN6-217ENST00000636964 C19orf12Q9NSK7 152 aa10.25□□□□□ -0.77
CLN6-217ENST00000636964 NPIPA1Q9UND3 350 aa10.25□□□□□ -0.77
CLN6-217ENST00000636964 COA3Q9Y2R0 106 aaPredicted RBP10.25□□□□□ -0.77
CLN6-217ENST00000636964 OTOGLQ3ZCN5 2332 aa10.24□□□□□ -0.77
CLN6-217ENST00000636964 IGLV3-32A0A0A0MS00 114 aa10.24□□□□□ -0.77
CLN6-217ENST00000636964 GABRA1P14867 456 aa10.24□□□□□ -0.77
CLN6-217ENST00000636964 DLSTP36957 453 aa10.24□□□□□ -0.77
CLN6-217ENST00000636964 DNASE1L1P49184 302 aa10.24□□□□□ -0.77
CLN6-217ENST00000636964 GMFBP60983 142 aa10.24□□□□□ -0.77
CLN6-217ENST00000636964 GFOD2Q3B7J2 385 aa10.24□□□□□ -0.77
CLN6-217ENST00000636964 Q5PR19 223 aa10.24□□□□□ -0.77
CLN6-217ENST00000636964 CDCP2Q5VXM1 449 aa10.24□□□□□ -0.77
CLN6-217ENST00000636964 ZNF660Q6AZW8 331 aaPredicted RBP10.24□□□□□ -0.77
CLN6-217ENST00000636964 CDC20BQ86Y33 519 aa10.24□□□□□ -0.77
CLN6-217ENST00000636964 IZUMO1Q8IYV9 350 aa10.24□□□□□ -0.77
CLN6-217ENST00000636964 SUMF1Q8NBK3 374 aa10.24□□□□□ -0.77
CLN6-217ENST00000636964 RELL2Q8NC24 303 aaPredicted RBP10.24□□□□□ -0.77
CLN6-217ENST00000636964 SMIM19Q96E16 107 aa10.24□□□□□ -0.77
CLN6-217ENST00000636964 ZFP3Q96NJ6 502 aa10.24□□□□□ -0.77
CLN6-217ENST00000636964 SPRY4Q9C004 299 aa10.24□□□□□ -0.77
CLN6-217ENST00000636964 IGKV1D-43A0A0B4J1Z2 117 aa10.24□□□□□ -0.77
CLN6-217ENST00000636964 ZNF814B7Z6K7 855 aa10.24□□□□□ -0.77
CLN6-217ENST00000636964 RAMP1O60894 148 aa10.24□□□□□ -0.77
CLN6-217ENST00000636964 SPARCP09486 303 aa10.24□□□□□ -0.77
CLN6-217ENST00000636964 NFYAP23511 347 aaPredicted RBP10.24□□□□□ -0.77
CLN6-217ENST00000636964 DPP4P27487 766 aa10.24□□□□□ -0.77
CLN6-217ENST00000636964 MTNR1BP49286 362 aa10.24□□□□□ -0.77
CLN6-217ENST00000636964 RAG2P55895 527 aa10.24□□□□□ -0.77
CLN6-217ENST00000636964 HSF1Q00613 529 aa10.24□□□□□ -0.77
CLN6-217ENST00000636964 CSRP2Q16527 193 aa10.24□□□□□ -0.77
CLN6-217ENST00000636964 TMEM164Q5U3C3 297 aa10.24□□□□□ -0.77
CLN6-217ENST00000636964 RPL22L1Q6P5R6 122 aaKnown RBP10.24□□□□□ -0.77
CLN6-217ENST00000636964 FADS6Q8N9I5 356 aa10.24□□□□□ -0.77
CLN6-217ENST00000636964 OR56B4Q8NH76 319 aa10.24□□□□□ -0.77
CLN6-217ENST00000636964 LIN37Q96GY3 246 aaPredicted RBP10.24□□□□□ -0.77
CLN6-217ENST00000636964 WASF3Q9UPY6 502 aa10.24□□□□□ -0.77
CLN6-217ENST00000636964 A0A0G2JMM0 328 aa10.23□□□□□ -0.77
CLN6-217ENST00000636964 A0A1W2PPB8 328 aa10.23□□□□□ -0.77
CLN6-217ENST00000636964 A0A1W2PRS3 328 aa10.23□□□□□ -0.77
CLN6-217ENST00000636964 KIR3DP1A8MWS1 328 aa10.23□□□□□ -0.77
CLN6-217ENST00000636964 TNFSF15O95150 251 aa10.23□□□□□ -0.77
CLN6-217ENST00000636964 ZNF684Q5T5D7 378 aa10.23□□□□□ -0.77
CLN6-217ENST00000636964 NSMAFQ92636 917 aa10.23□□□□□ -0.77
CLN6-217ENST00000636964 PCSK5Q92824 1860 aa10.23□□□□□ -0.77
CLN6-217ENST00000636964 RNF166Q96A37 237 aaPredicted RBP10.23□□□□□ -0.77
CLN6-217ENST00000636964 RHOVQ96L33 236 aa10.23□□□□□ -0.77
CLN6-217ENST00000636964 DDA1Q9BW61 102 aa10.23□□□□□ -0.77
CLN6-217ENST00000636964 OR10A4Q9H209 315 aa10.23□□□□□ -0.77
CLN6-217ENST00000636964 PARD6AQ9NPB6 346 aa10.23□□□□□ -0.77
CLN6-217ENST00000636964 MRPL22Q9NWU5 206 aaKnown RBP10.23□□□□□ -0.77
CLN6-217ENST00000636964 MGAT4CQ9UBM8 478 aa10.23□□□□□ -0.77
CLN6-217ENST00000636964 KCNK7Q9Y2U2 307 aa10.23□□□□□ -0.77
CLN6-217ENST00000636964 CCDC187A0A096LP49 1063 aa10.23□□□□□ -0.77
CLN6-217ENST00000636964 ANKRD61A6NGH8 418 aa10.23□□□□□ -0.77
CLN6-217ENST00000636964 SMAD9O15198 467 aaKnown RBP10.23□□□□□ -0.77
CLN6-217ENST00000636964 ZFPL1O95159 310 aa10.23□□□□□ -0.77
CLN6-217ENST00000636964 ALOX5APP20292 161 aa10.23□□□□□ -0.77
CLN6-217ENST00000636964 CRABP1P29762 137 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms