RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 CD200R1LQ6Q8B3 271 aa11.36□□□□□ -0.59
SHKBP1-209ENST00000595803 MDP1Q86V88 176 aa11.36□□□□□ -0.59
SHKBP1-209ENST00000595803 ELMOD2Q8IZ81 293 aa11.36□□□□□ -0.59
SHKBP1-209ENST00000595803 RDH10Q8IZV5 341 aa11.36□□□□□ -0.59
SHKBP1-209ENST00000595803 WDR31Q8NA23 367 aa11.36□□□□□ -0.59
SHKBP1-209ENST00000595803 IL17RDQ8NFM7 739 aa11.36□□□□□ -0.59
SHKBP1-209ENST00000595803 STEAP2Q8NFT2 490 aa11.36□□□□□ -0.59
SHKBP1-209ENST00000595803 KBTBD8Q8NFY9 601 aa11.36□□□□□ -0.59
SHKBP1-209ENST00000595803 GPR148Q8TDV2 347 aa11.36□□□□□ -0.59
SHKBP1-209ENST00000595803 SLC7A6Q92536 515 aa11.36□□□□□ -0.59
SHKBP1-209ENST00000595803 DCLRE1CQ96SD1 692 aaKnown RBP11.36□□□□□ -0.59
SHKBP1-209ENST00000595803 SLC24A3Q9HC58 644 aa11.36□□□□□ -0.59
SHKBP1-209ENST00000595803 ATPIF1Q9UII2 106 aa11.36□□□□□ -0.59
SHKBP1-209ENST00000595803 AMDHD2Q9Y303 409 aa11.36□□□□□ -0.59
SHKBP1-209ENST00000595803 CACNA1CQ13936 2221 aa11.36□□□□□ -0.59
SHKBP1-209ENST00000595803 NCOA6Q14686 2063 aaPredicted RBP11.36□□□□□ -0.59
SHKBP1-209ENST00000595803 ZNF503-AS2A6NEH8 195 aa11.35□□□□□ -0.59
SHKBP1-209ENST00000595803 P2RY10O00398 339 aa11.35□□□□□ -0.59
SHKBP1-209ENST00000595803 TBX1O43435 398 aa11.35□□□□□ -0.59
SHKBP1-209ENST00000595803 ZG16O60844 167 aa11.35□□□□□ -0.59
SHKBP1-209ENST00000595803 ATE1O95260 518 aa11.35□□□□□ -0.59
SHKBP1-209ENST00000595803 SERPINA5P05154 406 aa11.35□□□□□ -0.59
SHKBP1-209ENST00000595803 ACSM4P0C7M7 580 aa11.35□□□□□ -0.59
SHKBP1-209ENST00000595803 PSMB1P20618 241 aaKnown RBP11.35□□□□□ -0.59
SHKBP1-209ENST00000595803 CRYGSP22914 178 aa11.35□□□□□ -0.59
SHKBP1-209ENST00000595803 PAX7P23759 505 aa11.35□□□□□ -0.59
SHKBP1-209ENST00000595803 SERPINB10P48595 397 aa11.35□□□□□ -0.59
SHKBP1-209ENST00000595803 FAM27E3Q08E93 113 aa11.35□□□□□ -0.59
SHKBP1-209ENST00000595803 KRTAP27-1Q3LI81 207 aa11.35□□□□□ -0.59
SHKBP1-209ENST00000595803 UNQ9370/PRO34162Q6UXP9 181 aa11.35□□□□□ -0.59
SHKBP1-209ENST00000595803 STAC2Q6ZMT1 411 aa11.35□□□□□ -0.59
SHKBP1-209ENST00000595803 TMEM91Q6ZNR0 172 aa11.35□□□□□ -0.59
SHKBP1-209ENST00000595803 USP43Q70EL4 1123 aa11.35□□□□□ -0.59
SHKBP1-209ENST00000595803 FJX1Q86VR8 437 aa11.35□□□□□ -0.59
SHKBP1-209ENST00000595803 OR1J2Q8NGS2 313 aa11.35□□□□□ -0.59
SHKBP1-209ENST00000595803 OR13C5Q8NGS8 318 aa11.35□□□□□ -0.59
SHKBP1-209ENST00000595803 ASB5Q8WWX0 329 aa11.35□□□□□ -0.59
SHKBP1-209ENST00000595803 PHYHIPQ92561 330 aa11.35□□□□□ -0.59
SHKBP1-209ENST00000595803 MUCL1Q96DR8 90 aa11.35□□□□□ -0.59
SHKBP1-209ENST00000595803 KCTD7Q96MP8 289 aa11.35□□□□□ -0.59
SHKBP1-209ENST00000595803 USB1Q9BQ65 265 aaKnown RBP11.35□□□□□ -0.59
SHKBP1-209ENST00000595803 OR10A2Q9H208 303 aa11.35□□□□□ -0.59
SHKBP1-209ENST00000595803 RNF167Q9H6Y7 350 aa11.35□□□□□ -0.59
SHKBP1-209ENST00000595803 NOX3Q9HBY0 568 aa11.35□□□□□ -0.59
SHKBP1-209ENST00000595803 JKAMPQ9P055 326 aa11.35□□□□□ -0.59
SHKBP1-209ENST00000595803 NUFIP1Q9UHK0 495 aaKnown RBP11.35□□□□□ -0.59
SHKBP1-209ENST00000595803 HHLA2Q9UM44 414 aa11.35□□□□□ -0.59
SHKBP1-209ENST00000595803 POLEQ07864 2286 aa11.34□□□□□ -0.59
SHKBP1-209ENST00000595803 A0A1B0GVI7 797 aa11.34□□□□□ -0.59
SHKBP1-209ENST00000595803 C5orf49A4QMS7 147 aa11.34□□□□□ -0.59
SHKBP1-209ENST00000595803 OR5H1A6NKK0 313 aa11.34□□□□□ -0.59
SHKBP1-209ENST00000595803 ZNF879B4DU55 563 aa11.34□□□□□ -0.59
SHKBP1-209ENST00000595803 C16orf97H3BN30 126 aa11.34□□□□□ -0.59
SHKBP1-209ENST00000595803 TTRP02766 147 aa11.34□□□□□ -0.59
SHKBP1-209ENST00000595803 ISG15P05161 165 aa11.34□□□□□ -0.59
SHKBP1-209ENST00000595803 OCM2P0CE71 109 aa11.34□□□□□ -0.59
SHKBP1-209ENST00000595803 UBCP0CG48 685 aaKnown RBP11.34□□□□□ -0.59
SHKBP1-209ENST00000595803 ACHEP22303 614 aa11.34□□□□□ -0.59
SHKBP1-209ENST00000595803 MAPK3P27361 379 aaPredicted RBP11.34□□□□□ -0.59
SHKBP1-209ENST00000595803 CHRNB4P30926 498 aa11.34□□□□□ -0.59
SHKBP1-209ENST00000595803 OTX1P32242 354 aaPredicted RBP11.34□□□□□ -0.59
SHKBP1-209ENST00000595803 RPS11P62280 158 aaKnown RBP eCLIP11.34□□□□□ -0.59
SHKBP1-209ENST00000595803 INSL4Q14641 139 aa11.34□□□□□ -0.59
SHKBP1-209ENST00000595803 SPCS2Q15005 226 aa11.34□□□□□ -0.59
SHKBP1-209ENST00000595803 Q499Y3 187 aa11.34□□□□□ -0.59
SHKBP1-209ENST00000595803 ZMAT1Q5H9K5 638 aa11.34□□□□□ -0.59
SHKBP1-209ENST00000595803 TIMM23BQ5SRD1 257 aa11.34□□□□□ -0.59
SHKBP1-209ENST00000595803 C1QTNF12Q5T7M4 302 aa11.34□□□□□ -0.59
SHKBP1-209ENST00000595803 MTFR2Q6P444 385 aa11.34□□□□□ -0.59
SHKBP1-209ENST00000595803 COMMD2Q86X83 199 aa11.34□□□□□ -0.59
SHKBP1-209ENST00000595803 RELL2Q8NC24 303 aaPredicted RBP11.34□□□□□ -0.59
SHKBP1-209ENST00000595803 OR8B12Q8NGG6 310 aa11.34□□□□□ -0.59
SHKBP1-209ENST00000595803 OR52H1Q8NGJ2 320 aa11.34□□□□□ -0.59
SHKBP1-209ENST00000595803 TSEN15Q8WW01 171 aaKnown RBP11.34□□□□□ -0.59
SHKBP1-209ENST00000595803 THRSPQ92748 146 aa11.34□□□□□ -0.59
SHKBP1-209ENST00000595803 S100PBPQ96BU1 408 aa11.34□□□□□ -0.59
SHKBP1-209ENST00000595803 TRMT61AQ96FX7 289 aaKnown RBP11.34□□□□□ -0.59
SHKBP1-209ENST00000595803 POM121L2Q96KW2 1035 aa11.34□□□□□ -0.59
SHKBP1-209ENST00000595803 C1QTNF6Q9BXI9 259 aa11.34□□□□□ -0.59
SHKBP1-209ENST00000595803 DCSTAMPQ9H295 470 aa11.34□□□□□ -0.59
SHKBP1-209ENST00000595803 EIF3KQ9UBQ5 218 aaKnown RBP11.34□□□□□ -0.59
SHKBP1-209ENST00000595803 DHDHQ9UQ10 334 aa11.34□□□□□ -0.59
SHKBP1-209ENST00000595803 INTS1Q8N201 2190 aaKnown RBP11.33□□□□□ -0.6
SHKBP1-209ENST00000595803 LOC100509620A0A075B734 347 aa11.33□□□□□ -0.6
SHKBP1-209ENST00000595803 TRBV5-5A0A0J9YX44 114 aa11.33□□□□□ -0.6
SHKBP1-209ENST00000595803 A0A1W2PPK0 400 aa11.33□□□□□ -0.6
SHKBP1-209ENST00000595803 A0A1W2PPW3 197 aa11.33□□□□□ -0.6
SHKBP1-209ENST00000595803 H3BSH0 61 aa11.33□□□□□ -0.6
SHKBP1-209ENST00000595803 SYT7O43581 403 aa11.33□□□□□ -0.6
SHKBP1-209ENST00000595803 ARL6IP5O75915 188 aa11.33□□□□□ -0.6
SHKBP1-209ENST00000595803 CDRT1O95170 752 aa11.33□□□□□ -0.6
SHKBP1-209ENST00000595803 ZNF12P17014 697 aa11.33□□□□□ -0.6
SHKBP1-209ENST00000595803 MYL9P24844 172 aa11.33□□□□□ -0.6
SHKBP1-209ENST00000595803 TGFBR1P36897 503 aa11.33□□□□□ -0.6
SHKBP1-209ENST00000595803 SOX2P48431 317 aa11.33□□□□□ -0.6
SHKBP1-209ENST00000595803 IDH3GP51553 393 aaPredicted RBP11.33□□□□□ -0.6
SHKBP1-209ENST00000595803 TBC1D28Q2M2D7 210 aa11.33□□□□□ -0.6
SHKBP1-209ENST00000595803 SLC25A35Q3KQZ1 300 aa11.33□□□□□ -0.6
SHKBP1-209ENST00000595803 PRSS45Q7RTY3 260 aa11.33□□□□□ -0.6
SHKBP1-209ENST00000595803 SLC30A7Q8NEW0 376 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms