RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 LINC00299Q6ZSB3 139 aa11.72□□□□□ -0.53
VMP1-217ENST00000593168 TPRA1Q86W33 373 aa11.72□□□□□ -0.53
VMP1-217ENST00000593168 ZNF295-AS1Q8N0V1 137 aa11.72□□□□□ -0.53
VMP1-217ENST00000593168 ZNF808Q8N4W9 903 aaPredicted RBP11.72□□□□□ -0.53
VMP1-217ENST00000593168 ZNF799Q96GE5 643 aa11.72□□□□□ -0.53
VMP1-217ENST00000593168 DERL3Q96Q80 235 aa11.72□□□□□ -0.53
VMP1-217ENST00000593168 OR14A2Q96R54 314 aa11.72□□□□□ -0.53
VMP1-217ENST00000593168 VKORC1Q9BQB6 163 aa11.72□□□□□ -0.53
VMP1-217ENST00000593168 SLIRPQ9GZT3 109 aaKnown RBP11.72□□□□□ -0.53
VMP1-217ENST00000593168 PPIL3Q9H2H8 161 aaKnown RBP11.72□□□□□ -0.53
VMP1-217ENST00000593168 PIGMQ9H3S5 423 aa11.72□□□□□ -0.53
VMP1-217ENST00000593168 SP140LQ9H930 580 aa11.72□□□□□ -0.53
VMP1-217ENST00000593168 B3GNT2Q9NY97 397 aa11.72□□□□□ -0.53
VMP1-217ENST00000593168 ZNF629Q9UEG4 869 aaPredicted RBP11.72□□□□□ -0.53
VMP1-217ENST00000593168 TINAGQ9UJW2 476 aa11.72□□□□□ -0.53
VMP1-217ENST00000593168 HHLA2Q9UM44 414 aa11.72□□□□□ -0.53
VMP1-217ENST00000593168 TRBV5-7A0A0A0MS05 114 aa11.71□□□□□ -0.53
VMP1-217ENST00000593168 TRGV8A0A0C4DH27 118 aa11.71□□□□□ -0.53
VMP1-217ENST00000593168 CCL21O00585 134 aa11.71□□□□□ -0.53
VMP1-217ENST00000593168 MSTNO14793 375 aa11.71□□□□□ -0.53
VMP1-217ENST00000593168 CASKO14936 926 aa11.71□□□□□ -0.53
VMP1-217ENST00000593168 PIN1P1O15428 100 aa11.71□□□□□ -0.53
VMP1-217ENST00000593168 ANXA2P07355 339 aaKnown RBP11.71□□□□□ -0.53
VMP1-217ENST00000593168 ACSM4P0C7M7 580 aa11.71□□□□□ -0.53
VMP1-217ENST00000593168 OCM2P0CE71 109 aa11.71□□□□□ -0.53
VMP1-217ENST00000593168 CD79AP11912 226 aa11.71□□□□□ -0.53
VMP1-217ENST00000593168 MYL9P24844 172 aa11.71□□□□□ -0.53
VMP1-217ENST00000593168 CALRP27797 417 aaKnown RBP11.71□□□□□ -0.53
VMP1-217ENST00000593168 SOX6P35712 828 aa11.71□□□□□ -0.53
VMP1-217ENST00000593168 RORCP51449 518 aa11.71□□□□□ -0.53
VMP1-217ENST00000593168 CASP6P55212 293 aa11.71□□□□□ -0.53
VMP1-217ENST00000593168 PLP2Q04941 152 aa11.71□□□□□ -0.53
VMP1-217ENST00000593168 HIKESHIQ53FT3 197 aa11.71□□□□□ -0.53
VMP1-217ENST00000593168 HSD17B12Q53GQ0 312 aa11.71□□□□□ -0.53
VMP1-217ENST00000593168 FAM57BQ71RH2 274 aa11.71□□□□□ -0.53
VMP1-217ENST00000593168 C17orf78Q8N4C9 275 aa11.71□□□□□ -0.53
VMP1-217ENST00000593168 CPEB3Q8NE35 698 aaKnown RBP11.71□□□□□ -0.53
VMP1-217ENST00000593168 OR8B12Q8NGG6 310 aa11.71□□□□□ -0.53
VMP1-217ENST00000593168 OR52H1Q8NGJ2 320 aa11.71□□□□□ -0.53
VMP1-217ENST00000593168 SLC7A6Q92536 515 aa11.71□□□□□ -0.53
VMP1-217ENST00000593168 SLC25A46Q96AG3 418 aa11.71□□□□□ -0.53
VMP1-217ENST00000593168 NXF2Q9GZY0 626 aaKnown RBP11.71□□□□□ -0.53
VMP1-217ENST00000593168 OPN3Q9H1Y3 402 aaPredicted RBP11.71□□□□□ -0.53
VMP1-217ENST00000593168 SLC24A3Q9HC58 644 aa11.71□□□□□ -0.53
VMP1-217ENST00000593168 NOX4Q9NPH5 578 aa11.71□□□□□ -0.53
VMP1-217ENST00000593168 BRD7Q9NPI1 651 aa11.71□□□□□ -0.53
VMP1-217ENST00000593168 SNTG1Q9NSN8 517 aa11.71□□□□□ -0.53
VMP1-217ENST00000593168 RTTNQ86VV8 2226 aa11.7□□□□□ -0.54
VMP1-217ENST00000593168 A0A0G2JNJ9 132 aa11.7□□□□□ -0.54
VMP1-217ENST00000593168 A0A0U1RQV5 110 aa11.7□□□□□ -0.54
VMP1-217ENST00000593168 IQCMA0A1B0GVH7 501 aa11.7□□□□□ -0.54
VMP1-217ENST00000593168 SHISA3A0PJX4 238 aa11.7□□□□□ -0.54
VMP1-217ENST00000593168 ZNF503-AS2A6NEH8 195 aa11.7□□□□□ -0.54
VMP1-217ENST00000593168 P2RY10O00398 339 aa11.7□□□□□ -0.54
VMP1-217ENST00000593168 RAD51DO75771 328 aa11.7□□□□□ -0.54
VMP1-217ENST00000593168 LYZL6O75951 148 aa11.7□□□□□ -0.54
VMP1-217ENST00000593168 CLPXO76031 633 aa11.7□□□□□ -0.54
VMP1-217ENST00000593168 IGLV3-1P01715 115 aa11.7□□□□□ -0.54
VMP1-217ENST00000593168 CD2P06729 351 aa11.7□□□□□ -0.54
VMP1-217ENST00000593168 DBHP09172 617 aa11.7□□□□□ -0.54
VMP1-217ENST00000593168 SLC2A1P11166 492 aa11.7□□□□□ -0.54
VMP1-217ENST00000593168 SRMP19623 302 aa11.7□□□□□ -0.54
VMP1-217ENST00000593168 CCL1P22362 96 aa11.7□□□□□ -0.54
VMP1-217ENST00000593168 CA7P43166 264 aa11.7□□□□□ -0.54
VMP1-217ENST00000593168 SLC6A9P48067 706 aa11.7□□□□□ -0.54
VMP1-217ENST00000593168 SOX2P48431 317 aa11.7□□□□□ -0.54
VMP1-217ENST00000593168 KRTAP10-9P60411 292 aa11.7□□□□□ -0.54
VMP1-217ENST00000593168 UBE2NP61088 152 aaKnown RBP11.7□□□□□ -0.54
VMP1-217ENST00000593168 MXD1Q05195 221 aa11.7□□□□□ -0.54
VMP1-217ENST00000593168 TESK1Q15569 626 aa11.7□□□□□ -0.54
VMP1-217ENST00000593168 GSG1Q2KHT4 349 aa11.7□□□□□ -0.54
VMP1-217ENST00000593168 ODF4Q2M2E3 257 aa11.7□□□□□ -0.54
VMP1-217ENST00000593168 ZNF404Q494X3 552 aa11.7□□□□□ -0.54
VMP1-217ENST00000593168 SFRP5Q5T4F7 317 aa11.7□□□□□ -0.54
VMP1-217ENST00000593168 FAM27D1Q5T7N8 215 aa11.7□□□□□ -0.54
VMP1-217ENST00000593168 LUZP2Q86TE4 346 aa11.7□□□□□ -0.54
VMP1-217ENST00000593168 NAA40Q86UY6 237 aa11.7□□□□□ -0.54
VMP1-217ENST00000593168 CXorf67Q86X51 503 aaPredicted RBP11.7□□□□□ -0.54
VMP1-217ENST00000593168 CCDC54Q8NEL0 328 aa11.7□□□□□ -0.54
VMP1-217ENST00000593168 OR10AC1Q8NH08 325 aa11.7□□□□□ -0.54
VMP1-217ENST00000593168 TSEN15Q8WW01 171 aaKnown RBP11.7□□□□□ -0.54
VMP1-217ENST00000593168 ASB5Q8WWX0 329 aa11.7□□□□□ -0.54
VMP1-217ENST00000593168 PGAM5Q96HS1 289 aa11.7□□□□□ -0.54
VMP1-217ENST00000593168 DMRTA2Q96SC8 542 aa11.7□□□□□ -0.54
VMP1-217ENST00000593168 MMP27Q9H306 513 aa11.7□□□□□ -0.54
VMP1-217ENST00000593168 TPK1Q9H3S4 243 aa11.7□□□□□ -0.54
VMP1-217ENST00000593168 NOX3Q9HBY0 568 aa11.7□□□□□ -0.54
VMP1-217ENST00000593168 OBP2BQ9NPH6 170 aa11.7□□□□□ -0.54
VMP1-217ENST00000593168 ZNF319Q9P2F9 582 aa11.7□□□□□ -0.54
VMP1-217ENST00000593168 Q9UFV3 132 aa11.7□□□□□ -0.54
VMP1-217ENST00000593168 SH3BGRL2Q9UJC5 107 aa11.7□□□□□ -0.54
VMP1-217ENST00000593168 DHDHQ9UQ10 334 aa11.7□□□□□ -0.54
VMP1-217ENST00000593168 PMF1-BGLAPU3KQ54 211 aa11.7□□□□□ -0.54
VMP1-217ENST00000593168 CCDC168Q8NDH2 2452 aa11.7□□□□□ -0.54
VMP1-217ENST00000593168 ITPR3Q14573 2671 aa11.7□□□□□ -0.54
VMP1-217ENST00000593168 A0A075B6Q4 140 aa11.69□□□□□ -0.54
VMP1-217ENST00000593168 A0A1B0GTI1 187 aa11.69□□□□□ -0.54
VMP1-217ENST00000593168 A0A1B0GVI7 797 aa11.69□□□□□ -0.54
VMP1-217ENST00000593168 LOC107986453A0A1B0GWG9 222 aa11.69□□□□□ -0.54
VMP1-217ENST00000593168 A0A1W2PPK0 400 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms