RNA–Protein interactions for RNA: ENST00000590239.5

DDX39A-211, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-211ENST00000590239 CLEC18CQ8NCF0 446 aa13.11□□□□□ -0.31
DDX39A-211ENST00000590239 OR5L1Q8NGL2 311 aa13.11□□□□□ -0.31
DDX39A-211ENST00000590239 ITFG2Q969R8 447 aa13.11□□□□□ -0.31
DDX39A-211ENST00000590239 PPP1R14AQ96A00 147 aa13.11□□□□□ -0.31
DDX39A-211ENST00000590239 KCNS3Q9BQ31 491 aa13.11□□□□□ -0.31
DDX39A-211ENST00000590239 TUBG2Q9NRH3 451 aa13.11□□□□□ -0.31
DDX39A-211ENST00000590239 ZNF319Q9P2F9 582 aa13.11□□□□□ -0.31
DDX39A-211ENST00000590239 N6AMT1Q9Y5N5 214 aa13.11□□□□□ -0.31
DDX39A-211ENST00000590239 KLF2Q9Y5W3 355 aaPredicted RBP13.11□□□□□ -0.31
DDX39A-211ENST00000590239 HCFC1P51610 2035 aa13.11□□□□□ -0.31
DDX39A-211ENST00000590239 TBX1O43435 398 aa13.1□□□□□ -0.31
DDX39A-211ENST00000590239 XRCC2O43543 280 aa13.1□□□□□ -0.31
DDX39A-211ENST00000590239 IGLV3-1P01715 115 aa13.1□□□□□ -0.31
DDX39A-211ENST00000590239 HLA-DPB1P04440 258 aa13.1□□□□□ -0.31
DDX39A-211ENST00000590239 CFL1P23528 166 aaKnown RBP13.1□□□□□ -0.31
DDX39A-211ENST00000590239 RAD52P43351 418 aa13.1□□□□□ -0.31
DDX39A-211ENST00000590239 UCP2P55851 309 aa13.1□□□□□ -0.31
DDX39A-211ENST00000590239 SRSF1Q07955 248 aaKnown RBP eCLIP13.1□□□□□ -0.31
DDX39A-211ENST00000590239 MALLQ13021 153 aa13.1□□□□□ -0.31
DDX39A-211ENST00000590239 TIMM50Q3ZCQ8 353 aa13.1□□□□□ -0.31
DDX39A-211ENST00000590239 CD200R1LQ6Q8B3 271 aa13.1□□□□□ -0.31
DDX39A-211ENST00000590239 CCDC54Q8NEL0 328 aa13.1□□□□□ -0.31
DDX39A-211ENST00000590239 LINC01560Q8TB33 94 aa13.1□□□□□ -0.31
DDX39A-211ENST00000590239 ABHD4Q8TB40 342 aa13.1□□□□□ -0.31
DDX39A-211ENST00000590239 SSC4DQ8WTU2 575 aa13.1□□□□□ -0.31
DDX39A-211ENST00000590239 AKAP1Q92667 903 aaKnown RBP eCLIP13.1□□□□□ -0.31
DDX39A-211ENST00000590239 SPSB4Q96A44 273 aa13.1□□□□□ -0.31
DDX39A-211ENST00000590239 SGK3Q96BR1 496 aa13.1□□□□□ -0.31
DDX39A-211ENST00000590239 TMED9Q9BVK6 235 aa13.1□□□□□ -0.31
DDX39A-211ENST00000590239 FUNDC2Q9BWH2 189 aa13.1□□□□□ -0.31
DDX39A-211ENST00000590239 ESRP2Q9H6T0 727 aaKnown RBP13.1□□□□□ -0.31
DDX39A-211ENST00000590239 BATF3Q9NR55 127 aa13.1□□□□□ -0.31
DDX39A-211ENST00000590239 HHLA2Q9UM44 414 aa13.1□□□□□ -0.31
DDX39A-211ENST00000590239 SPEF1Q9Y4P9 236 aa13.1□□□□□ -0.31
DDX39A-211ENST00000590239 ANKRD17O75179 2603 aaKnown RBP13.1□□□□□ -0.31
DDX39A-211ENST00000590239 RTTNQ86VV8 2226 aa13.1□□□□□ -0.31
DDX39A-211ENST00000590239 A0A1B0GTI1 187 aa13.09□□□□□ -0.31
DDX39A-211ENST00000590239 A0A1B0GVI7 797 aa13.09□□□□□ -0.31
DDX39A-211ENST00000590239 LOC107986453A0A1B0GWG9 222 aa13.09□□□□□ -0.31
DDX39A-211ENST00000590239 C5orf63A6NC05 138 aa13.09□□□□□ -0.31
DDX39A-211ENST00000590239 DPRXA6NFQ7 191 aa13.09□□□□□ -0.31
DDX39A-211ENST00000590239 P2RY10O00398 339 aa13.09□□□□□ -0.31
DDX39A-211ENST00000590239 CASKO14936 926 aa13.09□□□□□ -0.31
DDX39A-211ENST00000590239 SMPD2O60906 423 aa13.09□□□□□ -0.31
DDX39A-211ENST00000590239 SERPINA3P01011 423 aa13.09□□□□□ -0.31
DDX39A-211ENST00000590239 IGFBP2P18065 325 aa13.09□□□□□ -0.31
DDX39A-211ENST00000590239 CCL1P22362 96 aa13.09□□□□□ -0.31
DDX39A-211ENST00000590239 CALCRP30988 508 aa13.09□□□□□ -0.31
DDX39A-211ENST00000590239 KIR2DL3P43628 341 aa13.09□□□□□ -0.31
DDX39A-211ENST00000590239 RPS11P62280 158 aaKnown RBP eCLIP13.09□□□□□ -0.31
DDX39A-211ENST00000590239 RPS25P62851 125 aaKnown RBP13.09□□□□□ -0.31
DDX39A-211ENST00000590239 RFPL4BQ6ZWI9 263 aa13.09□□□□□ -0.31
DDX39A-211ENST00000590239 ZNF101Q8IZC7 436 aa13.09□□□□□ -0.31
DDX39A-211ENST00000590239 PLPP7Q8NBV4 271 aa13.09□□□□□ -0.31
DDX39A-211ENST00000590239 OR51E1Q8TCB6 317 aa13.09□□□□□ -0.31
DDX39A-211ENST00000590239 GPR148Q8TDV2 347 aa13.09□□□□□ -0.31
DDX39A-211ENST00000590239 FAM222BQ8WU58 562 aa13.09□□□□□ -0.31
DDX39A-211ENST00000590239 RGP1Q92546 391 aaPredicted RBP13.09□□□□□ -0.31
DDX39A-211ENST00000590239 THRSPQ92748 146 aa13.09□□□□□ -0.31
DDX39A-211ENST00000590239 TMEM203Q969S6 136 aa13.09□□□□□ -0.31
DDX39A-211ENST00000590239 BCL2L14Q9BZR8 327 aa13.09□□□□□ -0.31
DDX39A-211ENST00000590239 OPA3Q9H6K4 179 aa13.09□□□□□ -0.31
DDX39A-211ENST00000590239 SLC24A3Q9HC58 644 aa13.09□□□□□ -0.31
DDX39A-211ENST00000590239 GPR84Q9NQS5 396 aa13.09□□□□□ -0.31
DDX39A-211ENST00000590239 NDUFA13Q9P0J0 144 aa13.09□□□□□ -0.31
DDX39A-211ENST00000590239 STUB1Q9UNE7 303 aa13.09□□□□□ -0.31
DDX39A-211ENST00000590239 STARD10Q9Y365 291 aa13.09□□□□□ -0.31
DDX39A-211ENST00000590239 ANKHD1Q8IWZ3 2542 aaKnown RBP13.09□□□□□ -0.31
DDX39A-211ENST00000590239 SPTBN1Q01082 2364 aaKnown RBP13.09□□□□□ -0.31
DDX39A-211ENST00000590239 TRDV1A0A1B0GX56 115 aa13.08□□□□□ -0.32
DDX39A-211ENST00000590239 LOC390937A0A1W2PQ73 354 aa13.08□□□□□ -0.32
DDX39A-211ENST00000590239 GATBO75879 557 aaKnown RBP13.08□□□□□ -0.32
DDX39A-211ENST00000590239 RGS9O75916 674 aaPredicted RBP13.08□□□□□ -0.32
DDX39A-211ENST00000590239 NGFP01138 241 aa13.08□□□□□ -0.32
DDX39A-211ENST00000590239 RNF224P0DH78 156 aa13.08□□□□□ -0.32
DDX39A-211ENST00000590239 ZNF12P17014 697 aa13.08□□□□□ -0.32
DDX39A-211ENST00000590239 NR4A1P22736 598 aa13.08□□□□□ -0.32
DDX39A-211ENST00000590239 ANOS1P23352 680 aa13.08□□□□□ -0.32
DDX39A-211ENST00000590239 GADD45AP24522 165 aa13.08□□□□□ -0.32
DDX39A-211ENST00000590239 CRYBB2P43320 205 aa13.08□□□□□ -0.32
DDX39A-211ENST00000590239 PPP1CBP62140 327 aa13.08□□□□□ -0.32
DDX39A-211ENST00000590239 SNTB1Q13884 538 aaKnown RBP13.08□□□□□ -0.32
DDX39A-211ENST00000590239 ODF4Q2M2E3 257 aa13.08□□□□□ -0.32
DDX39A-211ENST00000590239 BEX5Q5H9J7 111 aa13.08□□□□□ -0.32
DDX39A-211ENST00000590239 GLYATL3Q5SZD4 288 aa13.08□□□□□ -0.32
DDX39A-211ENST00000590239 NCMAPQ5T1S8 102 aa13.08□□□□□ -0.32
DDX39A-211ENST00000590239 GPR107Q5VW38 600 aa13.08□□□□□ -0.32
DDX39A-211ENST00000590239 GDPGP1Q6ZNW5 385 aa13.08□□□□□ -0.32
DDX39A-211ENST00000590239 Q6ZSR3 168 aa13.08□□□□□ -0.32
DDX39A-211ENST00000590239 DOK3Q7L591 496 aa13.08□□□□□ -0.32
DDX39A-211ENST00000590239 ANKRD13BQ86YJ7 626 aa13.08□□□□□ -0.32
DDX39A-211ENST00000590239 RDH10Q8IZV5 341 aa13.08□□□□□ -0.32
DDX39A-211ENST00000590239 REEP6Q96HR9 211 aa13.08□□□□□ -0.32
DDX39A-211ENST00000590239 RADILQ96JH8 1075 aa13.08□□□□□ -0.32
DDX39A-211ENST00000590239 PRR14LQ5THK1 2151 aa13.08□□□□□ -0.32
DDX39A-211ENST00000590239 COL12A1Q99715 3063 aa13.07□□□□□ -0.32
DDX39A-211ENST00000590239 TRBV5-5A0A0J9YX44 114 aa13.07□□□□□ -0.32
DDX39A-211ENST00000590239 SMIM31A0A1B0GVY4 71 aa13.07□□□□□ -0.32
DDX39A-211ENST00000590239 DPPA5A6NC42 116 aa13.07□□□□□ -0.32
DDX39A-211ENST00000590239 H3BSA7 217 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms