RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 TBPL2Q6SJ96 375 aa8.29□□□□□ -1.08
NPLOC4-220ENST00000576940 CCBE1Q6UXH8 406 aaPredicted RBP8.29□□□□□ -1.08
NPLOC4-220ENST00000576940 COLCA1Q6ZS62 124 aa8.29□□□□□ -1.08
NPLOC4-220ENST00000576940 HIST2H3AQ71DI3 136 aa8.29□□□□□ -1.08
NPLOC4-220ENST00000576940 FAM90A1Q86YD7 464 aa8.29□□□□□ -1.08
NPLOC4-220ENST00000576940 GLB1L2Q8IW92 636 aa8.29□□□□□ -1.08
NPLOC4-220ENST00000576940 GJC3Q8NFK1 279 aa8.29□□□□□ -1.08
NPLOC4-220ENST00000576940 SPRYD4Q8WW59 207 aaPredicted RBP8.29□□□□□ -1.08
NPLOC4-220ENST00000576940 CFHR4Q92496 578 aa8.29□□□□□ -1.08
NPLOC4-220ENST00000576940 ZNF583Q96ND8 569 aa8.29□□□□□ -1.08
NPLOC4-220ENST00000576940 COQ7Q99807 217 aa8.29□□□□□ -1.08
NPLOC4-220ENST00000576940 NUAK2Q9H093 628 aa8.29□□□□□ -1.08
NPLOC4-220ENST00000576940 SYT4Q9H2B2 425 aa8.29□□□□□ -1.08
NPLOC4-220ENST00000576940 FN3KRPQ9HA64 309 aa8.29□□□□□ -1.08
NPLOC4-220ENST00000576940 C1orf123Q9NWV4 160 aa8.29□□□□□ -1.08
NPLOC4-220ENST00000576940 ONECUT1Q9UBC0 465 aa8.29□□□□□ -1.08
NPLOC4-220ENST00000576940 CAB39Q9Y376 341 aaPredicted RBP8.29□□□□□ -1.08
NPLOC4-220ENST00000576940 KPTNQ9Y664 436 aa8.29□□□□□ -1.08
NPLOC4-220ENST00000576940 A0A1B0GVI7 797 aa8.28□□□□□ -1.08
NPLOC4-220ENST00000576940 MEIOCA2RUB1 952 aa8.28□□□□□ -1.08
NPLOC4-220ENST00000576940 J3KTA2 159 aa8.28□□□□□ -1.08
NPLOC4-220ENST00000576940 CDC42EP2O14613 210 aa8.28□□□□□ -1.08
NPLOC4-220ENST00000576940 ANGPT2O15123 496 aa8.28□□□□□ -1.08
NPLOC4-220ENST00000576940 NPFFO15130 113 aa8.28□□□□□ -1.08
NPLOC4-220ENST00000576940 MPIG6BO95866 241 aa8.28□□□□□ -1.08
NPLOC4-220ENST00000576940 ECDO95905 644 aaPredicted RBP8.28□□□□□ -1.08
NPLOC4-220ENST00000576940 LCATP04180 440 aa8.28□□□□□ -1.08
NPLOC4-220ENST00000576940 GRPP07492 148 aa8.28□□□□□ -1.08
NPLOC4-220ENST00000576940 KIR2DS4P43632 304 aa8.28□□□□□ -1.08
NPLOC4-220ENST00000576940 KLRD1Q13241 179 aa8.28□□□□□ -1.08
NPLOC4-220ENST00000576940 LY6EQ16553 131 aa8.28□□□□□ -1.08
NPLOC4-220ENST00000576940 RABL3Q5HYI8 236 aa8.28□□□□□ -1.08
NPLOC4-220ENST00000576940 FOXB2Q5VYV0 432 aa8.28□□□□□ -1.08
NPLOC4-220ENST00000576940 NANOGP8Q6NSW7 305 aa8.28□□□□□ -1.08
NPLOC4-220ENST00000576940 PGAP1Q75T13 922 aa8.28□□□□□ -1.08
NPLOC4-220ENST00000576940 FAM122BQ7Z309 247 aa8.28□□□□□ -1.08
NPLOC4-220ENST00000576940 CALHM3Q86XJ0 350 aa8.28□□□□□ -1.08
NPLOC4-220ENST00000576940 GCSAMQ8N6F7 178 aa8.28□□□□□ -1.08
NPLOC4-220ENST00000576940 KLHDC1Q8N7A1 406 aa8.28□□□□□ -1.08
NPLOC4-220ENST00000576940 Q8N7P7 452 aa8.28□□□□□ -1.08
NPLOC4-220ENST00000576940 LY6G5BQ8NDX9 201 aa8.28□□□□□ -1.08
NPLOC4-220ENST00000576940 NPRL2Q8WTW4 380 aa8.28□□□□□ -1.08
NPLOC4-220ENST00000576940 PHF21AQ96BD5 680 aa8.28□□□□□ -1.08
NPLOC4-220ENST00000576940 TPD52L3Q96J77 140 aa8.28□□□□□ -1.08
NPLOC4-220ENST00000576940 C7orf26Q96N11 449 aa8.28□□□□□ -1.08
NPLOC4-220ENST00000576940 ZNF570Q96NI8 536 aa8.28□□□□□ -1.08
NPLOC4-220ENST00000576940 TSSK2Q96PF2 358 aa8.28□□□□□ -1.08
NPLOC4-220ENST00000576940 CCL13Q99616 98 aa8.28□□□□□ -1.08
NPLOC4-220ENST00000576940 MMP28Q9H239 520 aa8.28□□□□□ -1.08
NPLOC4-220ENST00000576940 NMNAT1Q9HAN9 279 aaPredicted RBP8.28□□□□□ -1.08
NPLOC4-220ENST00000576940 ADA2Q9NZK5 511 aa8.28□□□□□ -1.08
NPLOC4-220ENST00000576940 POLR1DQ9Y2S0 133 aa8.28□□□□□ -1.08
NPLOC4-220ENST00000576940 SNX13Q9Y5W8 968 aa8.28□□□□□ -1.08
NPLOC4-220ENST00000576940 LHFPL6Q9Y693 200 aa8.28□□□□□ -1.08
NPLOC4-220ENST00000576940 COL7A1Q02388 2944 aa8.27□□□□□ -1.09
NPLOC4-220ENST00000576940 A0A087WUU8 490 aa8.27□□□□□ -1.09
NPLOC4-220ENST00000576940 HTR3EA5X5Y0 456 aa8.27□□□□□ -1.09
NPLOC4-220ENST00000576940 H3BUX3 64 aa8.27□□□□□ -1.09
NPLOC4-220ENST00000576940 DCTN6O00399 190 aa8.27□□□□□ -1.09
NPLOC4-220ENST00000576940 FFAR1O14842 300 aa8.27□□□□□ -1.09
NPLOC4-220ENST00000576940 AHCYL1O43865 530 aa8.27□□□□□ -1.09
NPLOC4-220ENST00000576940 XPNPEP2O43895 674 aa8.27□□□□□ -1.09
NPLOC4-220ENST00000576940 PTBP3O95758 552 aaKnown RBP8.27□□□□□ -1.09
NPLOC4-220ENST00000576940 PAHP00439 452 aa8.27□□□□□ -1.09
NPLOC4-220ENST00000576940 LHBP01229 141 aa8.27□□□□□ -1.09
NPLOC4-220ENST00000576940 ACSM4P0C7M7 580 aa8.27□□□□□ -1.09
NPLOC4-220ENST00000576940 VSIG10L2P0DP72 767 aa8.27□□□□□ -1.09
NPLOC4-220ENST00000576940 ANOS1P23352 680 aa8.27□□□□□ -1.09
NPLOC4-220ENST00000576940 EEF1B2P24534 225 aaKnown RBP8.27□□□□□ -1.09
NPLOC4-220ENST00000576940 PAX6P26367 422 aa8.27□□□□□ -1.09
NPLOC4-220ENST00000576940 GPR4P46093 362 aa8.27□□□□□ -1.09
NPLOC4-220ENST00000576940 KCNMB1Q16558 191 aa8.27□□□□□ -1.09
NPLOC4-220ENST00000576940 KRTAP27-1Q3LI81 207 aa8.27□□□□□ -1.09
NPLOC4-220ENST00000576940 ANKDD1AQ495B1 522 aa8.27□□□□□ -1.09
NPLOC4-220ENST00000576940 ZBED5Q49AG3 693 aa8.27□□□□□ -1.09
NPLOC4-220ENST00000576940 CYBRD1Q53TN4 286 aa8.27□□□□□ -1.09
NPLOC4-220ENST00000576940 METAP1DQ6UB28 335 aaPredicted RBP8.27□□□□□ -1.09
NPLOC4-220ENST00000576940 PTCHD4Q6ZW05 846 aa8.27□□□□□ -1.09
NPLOC4-220ENST00000576940 PIGWQ7Z7B1 504 aa8.27□□□□□ -1.09
NPLOC4-220ENST00000576940 LINC00346Q8IVM7 164 aa8.27□□□□□ -1.09
NPLOC4-220ENST00000576940 OR5R1Q8NH85 324 aa8.27□□□□□ -1.09
NPLOC4-220ENST00000576940 C17orf50Q8WW18 174 aa8.27□□□□□ -1.09
NPLOC4-220ENST00000576940 STON2Q8WXE9 905 aa8.27□□□□□ -1.09
NPLOC4-220ENST00000576940 RORBQ92753 470 aa8.27□□□□□ -1.09
NPLOC4-220ENST00000576940 PRRC1Q96M27 445 aa8.27□□□□□ -1.09
NPLOC4-220ENST00000576940 NSRP1Q9H0G5 558 aaKnown RBP8.27□□□□□ -1.09
NPLOC4-220ENST00000576940 HDHD2Q9H0R4 259 aa8.27□□□□□ -1.09
NPLOC4-220ENST00000576940 RABEP2Q9H5N1 569 aa8.27□□□□□ -1.09
NPLOC4-220ENST00000576940 SRA1Q9HD15 236 aaKnown RBP8.27□□□□□ -1.09
NPLOC4-220ENST00000576940 VSX1Q9NZR4 365 aaPredicted RBP8.27□□□□□ -1.09
NPLOC4-220ENST00000576940 KAAG1Q9UBP8 84 aa8.27□□□□□ -1.09
NPLOC4-220ENST00000576940 ATPIF1Q9UII2 106 aa8.27□□□□□ -1.09
NPLOC4-220ENST00000576940 hCG_1807616A0A1W2PRN6 198 aa8.26□□□□□ -1.09
NPLOC4-220ENST00000576940 A6NLC8 198 aa8.26□□□□□ -1.09
NPLOC4-220ENST00000576940 CD300LBA8K4G0 201 aa8.26□□□□□ -1.09
NPLOC4-220ENST00000576940 SOCS2O14508 198 aa8.26□□□□□ -1.09
NPLOC4-220ENST00000576940 PTP4A3O75365 173 aa8.26□□□□□ -1.09
NPLOC4-220ENST00000576940 PPP1R3DO95685 299 aa8.26□□□□□ -1.09
NPLOC4-220ENST00000576940 CD28P10747 220 aa8.26□□□□□ -1.09
NPLOC4-220ENST00000576940 KDELR2P33947 212 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms