RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 TNS1Q9HBL0 1735 aaKnown RBP11.22□□□□□ -0.61
CSPG4P13-202ENST00000567704 SMCHD1A6NHR9 2005 aa11.22□□□□□ -0.61
CSPG4P13-202ENST00000567704 C9orf170A2RU37 121 aa11.22□□□□□ -0.61
CSPG4P13-202ENST00000567704 FAM74A7A6NL05 159 aa11.22□□□□□ -0.61
CSPG4P13-202ENST00000567704 H0Y8G0 127 aa11.22□□□□□ -0.61
CSPG4P13-202ENST00000567704 F12P00748 615 aaPredicted RBP11.22□□□□□ -0.61
CSPG4P13-202ENST00000567704 POU3F2P20265 443 aaPredicted RBP11.22□□□□□ -0.61
CSPG4P13-202ENST00000567704 ASCL1P50553 236 aa11.22□□□□□ -0.61
CSPG4P13-202ENST00000567704 MOGAT2Q3SYC2 334 aa11.22□□□□□ -0.61
CSPG4P13-202ENST00000567704 FAM74A3Q4VXF1 159 aa11.22□□□□□ -0.61
CSPG4P13-202ENST00000567704 TMEM91Q6ZNR0 172 aa11.22□□□□□ -0.61
CSPG4P13-202ENST00000567704 AMER3Q8N944 861 aa11.22□□□□□ -0.61
CSPG4P13-202ENST00000567704 CA5BP1Q8WTZ4 195 aa11.22□□□□□ -0.61
CSPG4P13-202ENST00000567704 CCDC74AQ96AQ1 378 aa11.22□□□□□ -0.61
CSPG4P13-202ENST00000567704 NUDT9Q9BW91 350 aa11.22□□□□□ -0.61
CSPG4P13-202ENST00000567704 GPR84Q9NQS5 396 aa11.22□□□□□ -0.61
CSPG4P13-202ENST00000567704 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.22□□□□□ -0.61
CSPG4P13-202ENST00000567704 NTF3P20783 257 aa11.22□□□□□ -0.61
CSPG4P13-202ENST00000567704 TMEM52BQ4KMG9 183 aa11.22□□□□□ -0.61
CSPG4P13-202ENST00000567704 AWAT1Q58HT5 328 aa11.22□□□□□ -0.61
CSPG4P13-202ENST00000567704 NCR3LG1Q68D85 454 aa11.22□□□□□ -0.61
CSPG4P13-202ENST00000567704 PWWP2BQ6NUJ5 590 aa11.22□□□□□ -0.61
CSPG4P13-202ENST00000567704 ZNF66Q6ZN08 573 aa11.22□□□□□ -0.61
CSPG4P13-202ENST00000567704 BCORP1Q8N888 145 aa11.22□□□□□ -0.61
CSPG4P13-202ENST00000567704 OR4D11Q8NGI4 311 aa11.22□□□□□ -0.61
CSPG4P13-202ENST00000567704 OR2A1Q8NGT9 310 aa11.22□□□□□ -0.61
CSPG4P13-202ENST00000567704 OR52N5Q8NH56 324 aa11.22□□□□□ -0.61
CSPG4P13-202ENST00000567704 SEMA6CQ9H3T2 930 aa11.22□□□□□ -0.61
CSPG4P13-202ENST00000567704 GPR173Q9NS66 373 aa11.22□□□□□ -0.61
CSPG4P13-202ENST00000567704 DHCR7Q9UBM7 475 aaKnown RBP11.22□□□□□ -0.61
CSPG4P13-202ENST00000567704 R4GMQ9 66 aa11.22□□□□□ -0.61
CSPG4P13-202ENST00000567704 GSTZ1O43708 216 aaPredicted RBP11.22□□□□□ -0.61
CSPG4P13-202ENST00000567704 ACTL6BO94805 426 aa11.22□□□□□ -0.61
CSPG4P13-202ENST00000567704 NTN1O95631 604 aa11.22□□□□□ -0.61
CSPG4P13-202ENST00000567704 WNT11O96014 354 aa11.22□□□□□ -0.61
CSPG4P13-202ENST00000567704 CXCL2P19875 107 aa11.22□□□□□ -0.61
CSPG4P13-202ENST00000567704 UBE2NP61088 152 aaKnown RBP11.22□□□□□ -0.61
CSPG4P13-202ENST00000567704 PPIAP62937 165 aaKnown RBP11.22□□□□□ -0.61
CSPG4P13-202ENST00000567704 RPL7L1Q6DKI1 246 aaKnown RBP11.22□□□□□ -0.61
CSPG4P13-202ENST00000567704 LIMS2Q7Z4I7 341 aa11.22□□□□□ -0.61
CSPG4P13-202ENST00000567704 ADIPOR2Q86V24 386 aa11.22□□□□□ -0.61
CSPG4P13-202ENST00000567704 LINC00518Q8N0U6 118 aa11.22□□□□□ -0.61
CSPG4P13-202ENST00000567704 ZDHHC22Q8N966 263 aa11.22□□□□□ -0.61
CSPG4P13-202ENST00000567704 TCTN2Q96GX1 697 aa11.22□□□□□ -0.61
CSPG4P13-202ENST00000567704 SLC35B3Q9H1N7 401 aa11.22□□□□□ -0.61
CSPG4P13-202ENST00000567704 BCO1Q9HAY6 547 aa11.22□□□□□ -0.61
CSPG4P13-202ENST00000567704 CDH20Q9HBT6 801 aa11.22□□□□□ -0.61
CSPG4P13-202ENST00000567704 B4GALT7Q9UBV7 327 aa11.22□□□□□ -0.61
CSPG4P13-202ENST00000567704 PRSS37A4D1T9 235 aa11.21□□□□□ -0.61
CSPG4P13-202ENST00000567704 CST7O76096 145 aa11.21□□□□□ -0.61
CSPG4P13-202ENST00000567704 RPL29P47914 159 aaKnown RBP11.21□□□□□ -0.61
CSPG4P13-202ENST00000567704 CATR1Q13166 79 aa11.21□□□□□ -0.61
CSPG4P13-202ENST00000567704 VAMP3Q15836 100 aa11.21□□□□□ -0.61
CSPG4P13-202ENST00000567704 SP6Q3SY56 376 aa11.21□□□□□ -0.61
CSPG4P13-202ENST00000567704 DMKNQ6E0U4 476 aaPredicted RBP11.21□□□□□ -0.61
CSPG4P13-202ENST00000567704 DTWD2Q8NBA8 298 aa11.21□□□□□ -0.61
CSPG4P13-202ENST00000567704 WSB1Q9Y6I7 421 aa11.21□□□□□ -0.61
CSPG4P13-202ENST00000567704 PIAS3Q9Y6X2 628 aa11.21□□□□□ -0.61
CSPG4P13-202ENST00000567704 PRAMEF26H0Y7S4 382 aa11.21□□□□□ -0.61
CSPG4P13-202ENST00000567704 SELENOVP59797 346 aa11.21□□□□□ -0.61
CSPG4P13-202ENST00000567704 SLC35A1P78382 337 aa11.21□□□□□ -0.61
CSPG4P13-202ENST00000567704 C17orf67Q0P5P2 114 aa11.21□□□□□ -0.61
CSPG4P13-202ENST00000567704 KLF9Q13886 244 aaPredicted RBP11.21□□□□□ -0.61
CSPG4P13-202ENST00000567704 LTC4SQ16873 150 aa11.21□□□□□ -0.61
CSPG4P13-202ENST00000567704 GRINAQ7Z429 371 aa11.21□□□□□ -0.61
CSPG4P13-202ENST00000567704 ARRDC1Q8N5I2 433 aa11.21□□□□□ -0.61
CSPG4P13-202ENST00000567704 LILRB1Q8NHL6 650 aaPredicted RBP11.21□□□□□ -0.61
CSPG4P13-202ENST00000567704 FAM3CQ92520 227 aa11.21□□□□□ -0.61
CSPG4P13-202ENST00000567704 FGF13Q92913 245 aa11.21□□□□□ -0.61
CSPG4P13-202ENST00000567704 A0A0A6YYD5 115 aa11.21□□□□□ -0.61
CSPG4P13-202ENST00000567704 RNF212BA8MTL3 300 aa11.21□□□□□ -0.61
CSPG4P13-202ENST00000567704 GSTP1P09211 210 aaKnown RBP11.21□□□□□ -0.61
CSPG4P13-202ENST00000567704 APLNRP35414 380 aa11.21□□□□□ -0.61
CSPG4P13-202ENST00000567704 ZNF90Q03938 601 aa11.21□□□□□ -0.61
CSPG4P13-202ENST00000567704 SPANXN5Q5MJ07 72 aa11.21□□□□□ -0.61
CSPG4P13-202ENST00000567704 PRAMEF20Q5VT98 475 aa11.21□□□□□ -0.61
CSPG4P13-202ENST00000567704 HGDQ93099 445 aa11.21□□□□□ -0.61
CSPG4P13-202ENST00000567704 DAZAP1Q96EP5 407 aaKnown RBP11.21□□□□□ -0.61
CSPG4P13-202ENST00000567704 KCNJ15Q99712 375 aa11.21□□□□□ -0.61
CSPG4P13-202ENST00000567704 EDEM2Q9BV94 578 aa11.21□□□□□ -0.61
CSPG4P13-202ENST00000567704 KIR3DX1Q9H7L2 352 aa11.21□□□□□ -0.61
CSPG4P13-202ENST00000567704 FGF22Q9HCT0 170 aa11.21□□□□□ -0.61
CSPG4P13-202ENST00000567704 ZNF230Q9UIE0 474 aaPredicted RBP11.21□□□□□ -0.61
CSPG4P13-202ENST00000567704 TMEM272A0A1B0GTI8 110 aa11.21□□□□□ -0.62
CSPG4P13-202ENST00000567704 METTL15P1P0C7V9 234 aa11.21□□□□□ -0.62
CSPG4P13-202ENST00000567704 FABP6P51161 128 aa11.21□□□□□ -0.62
CSPG4P13-202ENST00000567704 ZNF85Q03923 595 aa11.21□□□□□ -0.62
CSPG4P13-202ENST00000567704 SCGB2A2Q13296 93 aa11.21□□□□□ -0.62
CSPG4P13-202ENST00000567704 WDR38Q5JTN6 314 aa11.21□□□□□ -0.62
CSPG4P13-202ENST00000567704 TMEM164Q5U3C3 297 aa11.21□□□□□ -0.62
CSPG4P13-202ENST00000567704 SSX7Q7RTT5 188 aa11.21□□□□□ -0.62
CSPG4P13-202ENST00000567704 FBXO17Q96EF6 278 aa11.21□□□□□ -0.62
CSPG4P13-202ENST00000567704 SLC52A3Q9NQ40 469 aa11.21□□□□□ -0.62
CSPG4P13-202ENST00000567704 CHRNA9Q9UGM1 479 aa11.21□□□□□ -0.62
CSPG4P13-202ENST00000567704 SUSD2Q9UGT4 822 aa11.21□□□□□ -0.62
CSPG4P13-202ENST00000567704 RGPD3A6NKT7 1758 aaPredicted RBP11.2□□□□□ -0.62
CSPG4P13-202ENST00000567704 RGPD4Q7Z3J3 1758 aa11.2□□□□□ -0.62
CSPG4P13-202ENST00000567704 CCDC187A0A096LP49 1063 aa11.2□□□□□ -0.62
CSPG4P13-202ENST00000567704 HSPB2A8KAH6 182 aa11.2□□□□□ -0.62
CSPG4P13-202ENST00000567704 CTDSPLO15194 276 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms