RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 SNAI3Q3KNW1 292 aa16.27■□□□□ 0.2
COMMD4-213ENST00000565834 HSD17B12Q53GQ0 312 aa16.27■□□□□ 0.2
COMMD4-213ENST00000565834 OR13C3Q8NGS6 347 aa16.27■□□□□ 0.2
COMMD4-213ENST00000565834 TMEM106AQ96A25 262 aa16.27■□□□□ 0.2
COMMD4-213ENST00000565834 MED18Q9BUE0 208 aa16.27■□□□□ 0.2
COMMD4-213ENST00000565834 COQ3Q9NZJ6 369 aa16.27■□□□□ 0.2
COMMD4-213ENST00000565834 CFAP46Q8IYW2 2715 aa16.27■□□□□ 0.2
COMMD4-213ENST00000565834 DIDO1Q9BTC0 2240 aaKnown RBP16.27■□□□□ 0.2
COMMD4-213ENST00000565834 A0A1B0GUH1 482 aa16.27■□□□□ 0.19
COMMD4-213ENST00000565834 C5orf63A6NC05 138 aa16.27■□□□□ 0.19
COMMD4-213ENST00000565834 AGFG2O95081 481 aa16.27■□□□□ 0.19
COMMD4-213ENST00000565834 IL1AP01583 271 aa16.27■□□□□ 0.19
COMMD4-213ENST00000565834 CD2P06729 351 aa16.27■□□□□ 0.19
COMMD4-213ENST00000565834 RPS19P39019 145 aaKnown RBP16.27■□□□□ 0.19
COMMD4-213ENST00000565834 MTNR1BP49286 362 aa16.27■□□□□ 0.19
COMMD4-213ENST00000565834 MXD1Q05195 221 aa16.27■□□□□ 0.19
COMMD4-213ENST00000565834 TBC1D28Q2M2D7 210 aa16.27■□□□□ 0.19
COMMD4-213ENST00000565834 ASB5Q8WWX0 329 aa16.27■□□□□ 0.19
COMMD4-213ENST00000565834 C1QTNF5Q9BXJ0 243 aa16.27■□□□□ 0.19
COMMD4-213ENST00000565834 ACTR6Q9GZN1 396 aa16.27■□□□□ 0.19
COMMD4-213ENST00000565834 SLC25A15Q9Y619 301 aa16.27■□□□□ 0.19
COMMD4-213ENST00000565834 PRR14LQ5THK1 2151 aa16.26■□□□□ 0.19
COMMD4-213ENST00000565834 TRBV5-7A0A0A0MS05 114 aa16.26■□□□□ 0.19
COMMD4-213ENST00000565834 A0A1B0GTI1 187 aa16.26■□□□□ 0.19
COMMD4-213ENST00000565834 CASKO14936 926 aa16.26■□□□□ 0.19
COMMD4-213ENST00000565834 PIN1P1O15428 100 aa16.26■□□□□ 0.19
COMMD4-213ENST00000565834 IGKV3-15P01624 115 aa16.26■□□□□ 0.19
COMMD4-213ENST00000565834 RAF1P04049 648 aa16.26■□□□□ 0.19
COMMD4-213ENST00000565834 CELA3BP08861 270 aa16.26■□□□□ 0.19
COMMD4-213ENST00000565834 CCL1P22362 96 aa16.26■□□□□ 0.19
COMMD4-213ENST00000565834 ADORA2A-AS1P86434 159 aa16.26■□□□□ 0.19
COMMD4-213ENST00000565834 SLC25A35Q3KQZ1 300 aa16.26■□□□□ 0.19
COMMD4-213ENST00000565834 DOK3Q7L591 496 aa16.26■□□□□ 0.19
COMMD4-213ENST00000565834 PRR7Q8TB68 274 aa16.26■□□□□ 0.19
COMMD4-213ENST00000565834 MUCL1Q96DR8 90 aa16.26■□□□□ 0.19
COMMD4-213ENST00000565834 C1QTNF6Q9BXI9 259 aa16.26■□□□□ 0.19
COMMD4-213ENST00000565834 MOV10Q9HCE1 1003 aaKnown RBP16.26■□□□□ 0.19
COMMD4-213ENST00000565834 SNTG1Q9NSN8 517 aa16.26■□□□□ 0.19
COMMD4-213ENST00000565834 HIVEP3Q5T1R4 2406 aa16.25■□□□□ 0.19
COMMD4-213ENST00000565834 TRAV1-2A0A0B4J238 106 aa16.25■□□□□ 0.19
COMMD4-213ENST00000565834 SHISA3A0PJX4 238 aa16.25■□□□□ 0.19
COMMD4-213ENST00000565834 C16orf97H3BN30 126 aa16.25■□□□□ 0.19
COMMD4-213ENST00000565834 IGLV3-1P01715 115 aa16.25■□□□□ 0.19
COMMD4-213ENST00000565834 DGUOKQ16854 277 aa16.25■□□□□ 0.19
COMMD4-213ENST00000565834 C1QTNF12Q5T7M4 302 aa16.25■□□□□ 0.19
COMMD4-213ENST00000565834 COLCA1Q6ZS62 124 aa16.25■□□□□ 0.19
COMMD4-213ENST00000565834 MYPOPQ86VE0 399 aaPredicted RBP16.25■□□□□ 0.19
COMMD4-213ENST00000565834 OR1J2Q8NGS2 313 aa16.25■□□□□ 0.19
COMMD4-213ENST00000565834 ORAI1Q96D31 301 aa16.25■□□□□ 0.19
COMMD4-213ENST00000565834 CCDC120Q96HB5 630 aa16.25■□□□□ 0.19
COMMD4-213ENST00000565834 FAM71F1Q96KD3 344 aaPredicted RBP16.25■□□□□ 0.19
COMMD4-213ENST00000565834 BBC3Q96PG8 261 aaPredicted RBP16.25■□□□□ 0.19
COMMD4-213ENST00000565834 USB1Q9BQ65 265 aaKnown RBP16.25■□□□□ 0.19
COMMD4-213ENST00000565834 TPK1Q9H3S4 243 aa16.25■□□□□ 0.19
COMMD4-213ENST00000565834 CLEC2LP0C7M8 214 aa16.24■□□□□ 0.19
COMMD4-213ENST00000565834 ZNF12P17014 697 aa16.24■□□□□ 0.19
COMMD4-213ENST00000565834 GNLYP22749 145 aa16.24■□□□□ 0.19
COMMD4-213ENST00000565834 PAX7P23759 505 aa16.24■□□□□ 0.19
COMMD4-213ENST00000565834 CCKARP32238 428 aa16.24■□□□□ 0.19
COMMD4-213ENST00000565834 ASCL1P50553 236 aa16.24■□□□□ 0.19
COMMD4-213ENST00000565834 PPA1Q15181 289 aa16.24■□□□□ 0.19
COMMD4-213ENST00000565834 IGFBP7Q16270 282 aa16.24■□□□□ 0.19
COMMD4-213ENST00000565834 MTFR2Q6P444 385 aa16.24■□□□□ 0.19
COMMD4-213ENST00000565834 TPRA1Q86W33 373 aa16.24■□□□□ 0.19
COMMD4-213ENST00000565834 FAM169BQ8N8A8 192 aa16.24■□□□□ 0.19
COMMD4-213ENST00000565834 APOBEC3DQ96AK3 386 aaPredicted RBP16.24■□□□□ 0.19
COMMD4-213ENST00000565834 SGK3Q96BR1 496 aa16.24■□□□□ 0.19
COMMD4-213ENST00000565834 REEP6Q96HR9 211 aa16.24■□□□□ 0.19
COMMD4-213ENST00000565834 LYZL4Q96KX0 146 aa16.24■□□□□ 0.19
COMMD4-213ENST00000565834 RGCCQ9H4X1 137 aa16.24■□□□□ 0.19
COMMD4-213ENST00000565834 CDH20Q9HBT6 801 aa16.24■□□□□ 0.19
COMMD4-213ENST00000565834 ZNF275Q9NSD4 429 aaPredicted RBP16.24■□□□□ 0.19
COMMD4-213ENST00000565834 CCDC59Q9P031 241 aaKnown RBP16.24■□□□□ 0.19
COMMD4-213ENST00000565834 CRNNQ9UBG3 495 aaPredicted RBP16.24■□□□□ 0.19
COMMD4-213ENST00000565834 ZNF391Q9UJN7 358 aa16.24■□□□□ 0.19
COMMD4-213ENST00000565834 XRCC2O43543 280 aa16.24■□□□□ 0.19
COMMD4-213ENST00000565834 SRMP19623 302 aa16.24■□□□□ 0.19
COMMD4-213ENST00000565834 SOX6P35712 828 aa16.24■□□□□ 0.19
COMMD4-213ENST00000565834 UQCRFS1P47985 274 aa16.24■□□□□ 0.19
COMMD4-213ENST00000565834 GLYATL3Q5SZD4 288 aa16.24■□□□□ 0.19
COMMD4-213ENST00000565834 PAQR4Q8N4S7 273 aaPredicted RBP16.24■□□□□ 0.19
COMMD4-213ENST00000565834 OR2AE1Q8NHA4 323 aa16.24■□□□□ 0.19
COMMD4-213ENST00000565834 SOX7Q9BT81 388 aa16.24■□□□□ 0.19
COMMD4-213ENST00000565834 SLITRK2Q9H156 845 aa16.24■□□□□ 0.19
COMMD4-213ENST00000565834 TCF7L1Q9HCS4 588 aa16.24■□□□□ 0.19
COMMD4-213ENST00000565834 ERRFI1Q9UJM3 462 aaPredicted RBP16.24■□□□□ 0.19
COMMD4-213ENST00000565834 SMIM30A4D0T7 59 aa16.23■□□□□ 0.19
COMMD4-213ENST00000565834 FAM90A27PA6NNH2 459 aa16.23■□□□□ 0.19
COMMD4-213ENST00000565834 LMX1BO60663 402 aa16.23■□□□□ 0.19
COMMD4-213ENST00000565834 IGLV1-44P01699 117 aa16.23■□□□□ 0.19
COMMD4-213ENST00000565834 TAB1Q15750 504 aa16.23■□□□□ 0.19
COMMD4-213ENST00000565834 PLPP7Q8NBV4 271 aa16.23■□□□□ 0.19
COMMD4-213ENST00000565834 CCDC54Q8NEL0 328 aa16.23■□□□□ 0.19
COMMD4-213ENST00000565834 AKAP1Q92667 903 aaKnown RBP eCLIP16.23■□□□□ 0.19
COMMD4-213ENST00000565834 SLC25A46Q96AG3 418 aa16.23■□□□□ 0.19
COMMD4-213ENST00000565834 TSC22D3Q99576 134 aa16.23■□□□□ 0.19
COMMD4-213ENST00000565834 OR10A4Q9H209 315 aa16.23■□□□□ 0.19
COMMD4-213ENST00000565834 CKLFQ9UBR5 152 aa16.23■□□□□ 0.19
COMMD4-213ENST00000565834 HEATR1Q9H583 2144 aaKnown RBP16.23■□□□□ 0.19
COMMD4-213ENST00000565834 B8ZZF3 427 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms