RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 ASCL2Q99929 193 aa6.22□□□□□ -1.41
HERPUD1-206ENST00000563343 CPPED1Q9BRF8 314 aaPredicted RBP6.22□□□□□ -1.41
HERPUD1-206ENST00000563343 MUC13Q9H3R2 512 aa6.22□□□□□ -1.41
HERPUD1-206ENST00000563343 IKZF5Q9H5V7 419 aa6.22□□□□□ -1.41
HERPUD1-206ENST00000563343 TMEM38AQ9H6F2 299 aa6.22□□□□□ -1.41
HERPUD1-206ENST00000563343 PPCSQ9HAB8 311 aa6.22□□□□□ -1.41
HERPUD1-206ENST00000563343 HIF3AQ9Y2N7 669 aa6.22□□□□□ -1.41
HERPUD1-206ENST00000563343 GMEB1Q9Y692 573 aa6.22□□□□□ -1.41
HERPUD1-206ENST00000563343 TRBV5-3A0A0A0MS03 114 aa6.21□□□□□ -1.42
HERPUD1-206ENST00000563343 SYNGR1O43759 233 aa6.21□□□□□ -1.42
HERPUD1-206ENST00000563343 TYROBPO43914 113 aa6.21□□□□□ -1.42
HERPUD1-206ENST00000563343 SLC22A3O75751 556 aa6.21□□□□□ -1.42
HERPUD1-206ENST00000563343 LYL1P12980 280 aa6.21□□□□□ -1.42
HERPUD1-206ENST00000563343 SELLP14151 372 aa6.21□□□□□ -1.42
HERPUD1-206ENST00000563343 AQP1P29972 269 aa6.21□□□□□ -1.42
HERPUD1-206ENST00000563343 TGM4P49221 684 aa6.21□□□□□ -1.42
HERPUD1-206ENST00000563343 HIST1H3AP68431 136 aa6.21□□□□□ -1.42
HERPUD1-206ENST00000563343 TOP3AQ13472 1001 aaPredicted RBP6.21□□□□□ -1.42
HERPUD1-206ENST00000563343 AQP6Q13520 282 aa6.21□□□□□ -1.42
HERPUD1-206ENST00000563343 SCARB2Q14108 478 aa6.21□□□□□ -1.42
HERPUD1-206ENST00000563343 GK2Q14410 553 aaPredicted RBP6.21□□□□□ -1.42
HERPUD1-206ENST00000563343 PCK2Q16822 640 aa6.21□□□□□ -1.42
HERPUD1-206ENST00000563343 WHAMMP3Q1A5X7 153 aa6.21□□□□□ -1.42
HERPUD1-206ENST00000563343 KRTAP27-1Q3LI81 207 aa6.21□□□□□ -1.42
HERPUD1-206ENST00000563343 WDR38Q5JTN6 314 aa6.21□□□□□ -1.42
HERPUD1-206ENST00000563343 LRIF1Q5T3J3 769 aa6.21□□□□□ -1.42
HERPUD1-206ENST00000563343 HIST2H3PS2Q5TEC6 136 aa6.21□□□□□ -1.42
HERPUD1-206ENST00000563343 NCR3LG1Q68D85 454 aa6.21□□□□□ -1.42
HERPUD1-206ENST00000563343 SLC2A7Q6PXP3 512 aa6.21□□□□□ -1.42
HERPUD1-206ENST00000563343 HIST2H3AQ71DI3 136 aa6.21□□□□□ -1.42
HERPUD1-206ENST00000563343 ARMC8Q8IUR7 673 aa6.21□□□□□ -1.42
HERPUD1-206ENST00000563343 NKAIN4Q8IVV8 208 aa6.21□□□□□ -1.42
HERPUD1-206ENST00000563343 C11orf53Q8IXP5 236 aa6.21□□□□□ -1.42
HERPUD1-206ENST00000563343 C17orf53Q8N3J3 647 aaPredicted RBP6.21□□□□□ -1.42
HERPUD1-206ENST00000563343 FAM216BQ8N7L0 139 aa6.21□□□□□ -1.42
HERPUD1-206ENST00000563343 SDR9C7Q8NEX9 313 aa6.21□□□□□ -1.42
HERPUD1-206ENST00000563343 OR5AU1Q8NGC0 362 aa6.21□□□□□ -1.42
HERPUD1-206ENST00000563343 PKNOX2Q96KN3 472 aa6.21□□□□□ -1.42
HERPUD1-206ENST00000563343 ZBTB18Q99592 522 aa6.21□□□□□ -1.42
HERPUD1-206ENST00000563343 CCL13Q99616 98 aa6.21□□□□□ -1.42
HERPUD1-206ENST00000563343 GPR61Q9BZJ8 451 aa6.21□□□□□ -1.42
HERPUD1-206ENST00000563343 WDR55Q9H6Y2 383 aaPredicted RBP6.21□□□□□ -1.42
HERPUD1-206ENST00000563343 RMND5AQ9H871 391 aa6.21□□□□□ -1.42
HERPUD1-206ENST00000563343 PNPOQ9NVS9 261 aa6.21□□□□□ -1.42
HERPUD1-206ENST00000563343 TCF19Q9Y242 345 aa6.21□□□□□ -1.42
HERPUD1-206ENST00000563343 A6NDX4 124 aa6.2□□□□□ -1.42
HERPUD1-206ENST00000563343 VGLL3A8MV65 326 aa6.2□□□□□ -1.42
HERPUD1-206ENST00000563343 H7C1C5 153 aa6.2□□□□□ -1.42
HERPUD1-206ENST00000563343 M0R1W7 72 aa6.2□□□□□ -1.42
HERPUD1-206ENST00000563343 ACOT8O14734 319 aa6.2□□□□□ -1.42
HERPUD1-206ENST00000563343 RER1O15258 196 aa6.2□□□□□ -1.42
HERPUD1-206ENST00000563343 SERPINB7O75635 380 aa6.2□□□□□ -1.42
HERPUD1-206ENST00000563343 CCDC159P0C7I6 412 aa6.2□□□□□ -1.42
HERPUD1-206ENST00000563343 CD247P20963 164 aa6.2□□□□□ -1.42
HERPUD1-206ENST00000563343 CA6P23280 308 aa6.2□□□□□ -1.42
HERPUD1-206ENST00000563343 ANOS1P23352 680 aa6.2□□□□□ -1.42
HERPUD1-206ENST00000563343 LORP23490 312 aaPredicted RBP6.2□□□□□ -1.42
HERPUD1-206ENST00000563343 GUCA1AP43080 201 aaPredicted RBP6.2□□□□□ -1.42
HERPUD1-206ENST00000563343 SLC1A6P48664 564 aa6.2□□□□□ -1.42
HERPUD1-206ENST00000563343 PSMA6P60900 246 aaKnown RBP6.2□□□□□ -1.42
HERPUD1-206ENST00000563343 LCN6P62502 163 aa6.2□□□□□ -1.42
HERPUD1-206ENST00000563343 BLCAPP62952 87 aa6.2□□□□□ -1.42
HERPUD1-206ENST00000563343 CNN3Q15417 329 aaKnown RBP6.2□□□□□ -1.42
HERPUD1-206ENST00000563343 ALG10Q5BKT4 473 aa6.2□□□□□ -1.42
HERPUD1-206ENST00000563343 C6orf10Q5SRN2 563 aa6.2□□□□□ -1.42
HERPUD1-206ENST00000563343 CCDC121Q6ZUS5 278 aa6.2□□□□□ -1.42
HERPUD1-206ENST00000563343 NAA40Q86UY6 237 aa6.2□□□□□ -1.42
HERPUD1-206ENST00000563343 MRPL41Q8IXM3 137 aaKnown RBP6.2□□□□□ -1.42
HERPUD1-206ENST00000563343 DYNAPQ8N1N2 210 aa6.2□□□□□ -1.42
HERPUD1-206ENST00000563343 TMEM255BQ8WV15 326 aa6.2□□□□□ -1.42
HERPUD1-206ENST00000563343 ACOT11Q8WXI4 607 aaPredicted RBP6.2□□□□□ -1.42
HERPUD1-206ENST00000563343 DPF1Q92782 380 aa6.2□□□□□ -1.42
HERPUD1-206ENST00000563343 MYDGFQ969H8 173 aa6.2□□□□□ -1.42
HERPUD1-206ENST00000563343 SEH1LQ96EE3 360 aa6.2□□□□□ -1.42
HERPUD1-206ENST00000563343 SGTBQ96EQ0 304 aa6.2□□□□□ -1.42
HERPUD1-206ENST00000563343 CHID1Q9BWS9 393 aa6.2□□□□□ -1.42
HERPUD1-206ENST00000563343 HCAR1Q9BXC0 346 aa6.2□□□□□ -1.42
HERPUD1-206ENST00000563343 PRSS22Q9GZN4 317 aa6.2□□□□□ -1.42
HERPUD1-206ENST00000563343 METTL8Q9H825 291 aaKnown RBP6.2□□□□□ -1.42
HERPUD1-206ENST00000563343 GRPEL1Q9HAV7 217 aa6.2□□□□□ -1.42
HERPUD1-206ENST00000563343 SDR39U1Q9NRG7 319 aaPredicted RBP6.2□□□□□ -1.42
HERPUD1-206ENST00000563343 C1orf123Q9NWV4 160 aa6.2□□□□□ -1.42
HERPUD1-206ENST00000563343 ZIM2Q9NZV7 527 aa6.2□□□□□ -1.42
HERPUD1-206ENST00000563343 VAPAQ9P0L0 249 aa6.2□□□□□ -1.42
HERPUD1-206ENST00000563343 SLAMF8Q9P0V8 285 aa6.2□□□□□ -1.42
HERPUD1-206ENST00000563343 SLC13A4Q9UKG4 626 aa6.2□□□□□ -1.42
HERPUD1-206ENST00000563343 NDUFAF1Q9Y375 327 aa6.2□□□□□ -1.42
HERPUD1-206ENST00000563343 TSSC4Q9Y5U2 329 aaPredicted RBP6.2□□□□□ -1.42
HERPUD1-206ENST00000563343 CAPN7Q9Y6W3 813 aa6.2□□□□□ -1.42
HERPUD1-206ENST00000563343 TEX13CA0A0J9YWL9 993 aa6.19□□□□□ -1.42
HERPUD1-206ENST00000563343 FAM90A8PA6NJQ4 464 aa6.19□□□□□ -1.42
HERPUD1-206ENST00000563343 POLR3GO15318 223 aaPredicted RBP6.19□□□□□ -1.42
HERPUD1-206ENST00000563343 ACSM4P0C7M7 580 aa6.19□□□□□ -1.42
HERPUD1-206ENST00000563343 IDO1P14902 403 aa6.19□□□□□ -1.42
HERPUD1-206ENST00000563343 MUC1P15941 1255 aaPredicted RBP6.19□□□□□ -1.42
HERPUD1-206ENST00000563343 CTLA4P16410 223 aa6.19□□□□□ -1.42
HERPUD1-206ENST00000563343 GPX2P18283 190 aa6.19□□□□□ -1.42
HERPUD1-206ENST00000563343 CHATP28329 748 aa6.19□□□□□ -1.42
HERPUD1-206ENST00000563343 RBM34P42696 430 aaKnown RBP6.19□□□□□ -1.42
HERPUD1-206ENST00000563343 RAB13P51153 203 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms