RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 CYP4Z1Q86W10 505 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 SPATA24Q86W54 205 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 HS3ST5Q8IZT8 346 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 CNEP1R1Q8N9A8 125 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 OR9Q2Q8NGE9 314 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 OR8D4Q8NGM9 314 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 OR13C2Q8NGS9 318 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 OR52J3Q8NH60 311 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 ZNF519Q8TB69 540 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 RNASE6Q93091 150 aaKnown RBP3.91□□□□□ -1.78
SMG1-206ENST00000562668 TMEM54Q969K7 222 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 MCUR1Q96AQ8 359 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 LGALS12Q96DT0 336 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 ZHX1-C8orf76Q96EF9 292 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 TSPAN32Q96QS1 320 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 OR2M2Q96R28 347 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 TNFRSF13CQ96RJ3 184 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 GPX7Q96SL4 187 aaPredicted RBP3.91□□□□□ -1.78
SMG1-206ENST00000562668 DDOQ99489 341 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 TAPBPLQ9BX59 468 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 DGCR6LQ9BY27 220 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 MRPL13Q9BYD1 178 aaKnown RBP3.91□□□□□ -1.78
SMG1-206ENST00000562668 PRRG4Q9BZD6 226 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 LINC00470Q9BZP3 86 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 HINT3Q9NQE9 182 aaKnown RBP3.91□□□□□ -1.78
SMG1-206ENST00000562668 NANSQ9NR45 359 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 SLC7A10Q9NS82 523 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 MED29Q9NX70 200 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 COQ3Q9NZJ6 369 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 HSPB7Q9UBY9 170 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 LSM4Q9Y4Z0 139 aaKnown RBP3.91□□□□□ -1.78
SMG1-206ENST00000562668 MAGED1Q9Y5V3 778 aaPredicted RBP3.91□□□□□ -1.78
SMG1-206ENST00000562668 ADGRG4Q8IZF6 3080 aa3.9□□□□□ -1.78
SMG1-206ENST00000562668 ICE1Q9Y2F5 2266 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 DOPEY2Q9Y3R5 2298 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 TRAV27A0A087WT01 109 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 IGKV1D-43A0A0B4J1Z2 117 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 ARRDC5A6NEK1 342 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 GAGE10A6NGK3 116 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 EFCAB9A8MZ26 197 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 ANKRD65E5RJM6 399 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 TNFRSF11BO00300 401 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 GPR171O14626 319 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 IMPA2O14732 288 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 CLOCKO15516 846 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 ENTPD5O75356 428 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 MRPL33O75394 65 aaKnown RBP3.9□□□□□ -1.79
SMG1-206ENST00000562668 TXNDC12O95881 172 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 IGHV3-9P01782 118 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 IGFBP1P08833 259 aaPredicted RBP3.9□□□□□ -1.79
SMG1-206ENST00000562668 PGA4P0DJD7 388 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 PGA3P0DJD8 388 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 ADORA3P0DMS8 318 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 PSMB1P20618 241 aaKnown RBP3.9□□□□□ -1.79
SMG1-206ENST00000562668 UGT2B10P36537 528 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 CD79BP40259 229 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 CLDN17P56750 224 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 SMIM11AP58511 58 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 ISL1P61371 349 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 SORDQ00796 357 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 TSPAN31Q12999 210 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 PMS2P3Q13401 168 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 SNTB1Q13884 538 aaKnown RBP3.9□□□□□ -1.79
SMG1-206ENST00000562668 GK3PQ14409 553 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 TSC22D1Q15714 1073 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 ATP6AP1Q15904 470 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 GABRA6Q16445 453 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 ACKR1Q16570 336 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 ZSCAN26Q16670 478 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 C2orf68Q2NKX9 166 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 RFX4Q33E94 735 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 ANKDD1AQ495B1 522 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 ZBED5Q49AG3 693 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 MESTQ5EB52 335 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 FGD3Q5JSP0 725 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 C1orf146Q5VVC0 180 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 FBXW9Q5XUX1 488 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 GGNBP1Q5YKI7 109 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 TMEM225Q6GV28 225 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 SLC35E4Q6ICL7 350 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 FAHD1Q6P587 224 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 ZNF730Q6ZMV8 503 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 ZNF620Q6ZNG0 422 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 SLC35D2Q76EJ3 337 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 AAED1Q7RTV5 226 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 C20orf196Q8IYI0 205 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 ZNF433Q8N7K0 673 aaPredicted RBP3.9□□□□□ -1.79
SMG1-206ENST00000562668 CLDN22Q8N7P3 220 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 WDR31Q8NA23 367 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 OR51A7Q8NH64 312 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 OR6X1Q8NH79 312 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 CA5BP1Q8WTZ4 195 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 HDAC2Q92769 488 aaKnown RBP3.9□□□□□ -1.79
SMG1-206ENST00000562668 APH1AQ96BI3 265 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 RSRC1Q96IZ7 334 aaKnown RBP3.9□□□□□ -1.79
SMG1-206ENST00000562668 LRR1Q96L50 414 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 ZNF75AQ96N20 296 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 MUS81Q96NY9 551 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 NIPSNAP1Q9BPW8 284 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 EMC6Q9BV81 110 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms