RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 TLE4Q04727 773 aa16.69■□□□□ 0.26
RAB40C-206ENST00000561781 ZNF343Q6P1L6 599 aa16.69■□□□□ 0.26
RAB40C-206ENST00000561781 NUP43Q8NFH3 380 aa16.69■□□□□ 0.26
RAB40C-206ENST00000561781 TAAR8Q969N4 342 aa16.69■□□□□ 0.26
RAB40C-206ENST00000561781 RCC1LQ96I51 464 aaKnown RBP16.69■□□□□ 0.26
RAB40C-206ENST00000561781 DPEP2Q9H4A9 486 aa16.69■□□□□ 0.26
RAB40C-206ENST00000561781 TMED7Q9Y3B3 224 aa16.69■□□□□ 0.26
RAB40C-206ENST00000561781 CHTOPQ9Y3Y2 248 aaKnown RBP16.69■□□□□ 0.26
RAB40C-206ENST00000561781 TGIF2-C20orf24A0A0A6YYL0 155 aa16.68■□□□□ 0.26
RAB40C-206ENST00000561781 CENPVL1A0A0U1RR11 272 aa16.68■□□□□ 0.26
RAB40C-206ENST00000561781 ZNF727A8MUV8 499 aa16.68■□□□□ 0.26
RAB40C-206ENST00000561781 EFSO43281 561 aa16.68■□□□□ 0.26
RAB40C-206ENST00000561781 GUSBP08236 651 aa16.68■□□□□ 0.26
RAB40C-206ENST00000561781 ZNF28P17035 718 aa16.68■□□□□ 0.26
RAB40C-206ENST00000561781 THBS4P35443 961 aa16.68■□□□□ 0.26
RAB40C-206ENST00000561781 ERVFRD-1P60508 538 aa16.68■□□□□ 0.26
RAB40C-206ENST00000561781 ZNF616Q08AN1 781 aa16.68■□□□□ 0.26
RAB40C-206ENST00000561781 TRA2AQ13595 282 aaKnown RBP eCLIP16.68■□□□□ 0.26
RAB40C-206ENST00000561781 HYAL4Q2M3T9 481 aa16.68■□□□□ 0.26
RAB40C-206ENST00000561781 ZNF774Q6NX45 483 aa16.68■□□□□ 0.26
RAB40C-206ENST00000561781 PLPP5Q8NEB5 264 aa16.68■□□□□ 0.26
RAB40C-206ENST00000561781 OR4K15Q8NH41 348 aa16.68■□□□□ 0.26
RAB40C-206ENST00000561781 OR5AK2Q8NH90 309 aa16.68■□□□□ 0.26
RAB40C-206ENST00000561781 ZNRF4Q8WWF5 429 aa16.68■□□□□ 0.26
RAB40C-206ENST00000561781 GLYATL1Q969I3 302 aa16.68■□□□□ 0.26
RAB40C-206ENST00000561781 KCNK15Q9H427 330 aa16.68■□□□□ 0.26
RAB40C-206ENST00000561781 PLEKHA2Q9HB19 425 aa16.68■□□□□ 0.26
RAB40C-206ENST00000561781 PDE7BQ9NP56 450 aa16.68■□□□□ 0.26
RAB40C-206ENST00000561781 PRSS16Q9NQE7 514 aa16.68■□□□□ 0.26
RAB40C-206ENST00000561781 LUZP4Q9P127 313 aa16.68■□□□□ 0.26
RAB40C-206ENST00000561781 MYOTQ9UBF9 498 aa16.68■□□□□ 0.26
RAB40C-206ENST00000561781 TAC3Q9UHF0 121 aa16.68■□□□□ 0.26
RAB40C-206ENST00000561781 F5P12259 2224 aa16.68■□□□□ 0.26
RAB40C-206ENST00000561781 PLXNA2O75051 1894 aa16.68■□□□□ 0.26
RAB40C-206ENST00000561781 LOC100289279A0A1B0GTE1 492 aa16.68■□□□□ 0.26
RAB40C-206ENST00000561781 A0A1B0GW64 132 aa16.68■□□□□ 0.26
RAB40C-206ENST00000561781 LDLRAD4O15165 306 aa16.68■□□□□ 0.26
RAB40C-206ENST00000561781 NME2P1O60361 137 aa16.68■□□□□ 0.26
RAB40C-206ENST00000561781 RAMP1O60894 148 aa16.68■□□□□ 0.26
RAB40C-206ENST00000561781 ZNF432O94892 652 aa16.68■□□□□ 0.26
RAB40C-206ENST00000561781 ELFN1P0C7U0 828 aa16.68■□□□□ 0.26
RAB40C-206ENST00000561781 GDI1P31150 447 aa16.68■□□□□ 0.26
RAB40C-206ENST00000561781 GPR3P46089 330 aa16.68■□□□□ 0.26
RAB40C-206ENST00000561781 ZNF658BQ4V348 819 aaPredicted RBP16.68■□□□□ 0.26
RAB40C-206ENST00000561781 FBXW9Q5XUX1 488 aa16.68■□□□□ 0.26
RAB40C-206ENST00000561781 ARHGAP11AQ6P4F7 1023 aa16.68■□□□□ 0.26
RAB40C-206ENST00000561781 C22orf39Q6P5X5 142 aa16.68■□□□□ 0.26
RAB40C-206ENST00000561781 C17orf64Q86WR6 236 aa16.68■□□□□ 0.26
RAB40C-206ENST00000561781 OR4K13Q8NH42 304 aa16.68■□□□□ 0.26
RAB40C-206ENST00000561781 FIBINQ8TAL6 211 aa16.68■□□□□ 0.26
RAB40C-206ENST00000561781 IL36AQ9UHA7 158 aa16.68■□□□□ 0.26
RAB40C-206ENST00000561781 OR52A1Q9UKL2 312 aa16.68■□□□□ 0.26
RAB40C-206ENST00000561781 TRAV8-7A0A075B6U6 113 aa16.67■□□□□ 0.26
RAB40C-206ENST00000561781 A0A0A6YYD5 115 aa16.67■□□□□ 0.26
RAB40C-206ENST00000561781 TRBV5-5A0A0J9YX44 114 aa16.67■□□□□ 0.26
RAB40C-206ENST00000561781 TMEM238LA0A1B0GVL6 79 aa16.67■□□□□ 0.26
RAB40C-206ENST00000561781 AMBPP02760 352 aa16.67■□□□□ 0.26
RAB40C-206ENST00000561781 CSN2P05814 226 aa16.67■□□□□ 0.26
RAB40C-206ENST00000561781 AKR1C4P17516 323 aa16.67■□□□□ 0.26
RAB40C-206ENST00000561781 GRPRP30550 384 aa16.67■□□□□ 0.26
RAB40C-206ENST00000561781 SSR2P43308 183 aa16.67■□□□□ 0.26
RAB40C-206ENST00000561781 SOX8P57073 446 aa16.67■□□□□ 0.26
RAB40C-206ENST00000561781 TAS2R31P59538 309 aa16.67■□□□□ 0.26
RAB40C-206ENST00000561781 MESP2Q0VG99 397 aa16.67■□□□□ 0.26
RAB40C-206ENST00000561781 OR4C11Q6IEV9 310 aa16.67■□□□□ 0.26
RAB40C-206ENST00000561781 AIF1LQ9BQI0 150 aa16.67■□□□□ 0.26
RAB40C-206ENST00000561781 USP36Q9P275 1121 aaKnown RBP16.67■□□□□ 0.26
RAB40C-206ENST00000561781 A6NNC1 897 aa16.67■□□□□ 0.26
RAB40C-206ENST00000561781 A8MXE2 369 aa16.67■□□□□ 0.26
RAB40C-206ENST00000561781 TK1P04183 234 aa16.67■□□□□ 0.26
RAB40C-206ENST00000561781 GJA4P35212 333 aa16.67■□□□□ 0.26
RAB40C-206ENST00000561781 HERPUD1Q15011 391 aa16.67■□□□□ 0.26
RAB40C-206ENST00000561781 C2orf76Q3KRA6 126 aa16.67■□□□□ 0.26
RAB40C-206ENST00000561781 EXOSC6Q5RKV6 272 aaKnown RBP16.67■□□□□ 0.26
RAB40C-206ENST00000561781 RIPPLY2Q5TAB7 128 aa16.67■□□□□ 0.26
RAB40C-206ENST00000561781 ARMC6Q6NXE6 501 aa16.67■□□□□ 0.26
RAB40C-206ENST00000561781 ZNF793Q6ZN11 406 aa16.67■□□□□ 0.26
RAB40C-206ENST00000561781 ZNF584Q8IVC4 421 aa16.67■□□□□ 0.26
RAB40C-206ENST00000561781 SLC35G3Q8N808 338 aa16.67■□□□□ 0.26
RAB40C-206ENST00000561781 MFSD8Q8NHS3 518 aa16.67■□□□□ 0.26
RAB40C-206ENST00000561781 RNF166Q96A37 237 aaPredicted RBP16.67■□□□□ 0.26
RAB40C-206ENST00000561781 FAM3DQ96BQ1 224 aa16.67■□□□□ 0.26
RAB40C-206ENST00000561781 ARSGQ96EG1 525 aa16.67■□□□□ 0.26
RAB40C-206ENST00000561781 JSRP1Q96MG2 331 aaPredicted RBP16.67■□□□□ 0.26
RAB40C-206ENST00000561781 RAB18Q9NP72 206 aa16.67■□□□□ 0.26
RAB40C-206ENST00000561781 URGCP-MRPS24S4R325 110 aa16.67■□□□□ 0.26
RAB40C-206ENST00000561781 RPP14O95059 124 aaKnown RBP16.66■□□□□ 0.26
RAB40C-206ENST00000561781 HIST1H1CP16403 213 aaKnown RBP16.66■□□□□ 0.26
RAB40C-206ENST00000561781 TBPP20226 339 aa16.66■□□□□ 0.26
RAB40C-206ENST00000561781 CDKN1BP46527 198 aa16.66■□□□□ 0.26
RAB40C-206ENST00000561781 EIF2B1Q14232 305 aaKnown RBP16.66■□□□□ 0.26
RAB40C-206ENST00000561781 OR1Q1Q15612 314 aa16.66■□□□□ 0.26
RAB40C-206ENST00000561781 RPUSD3Q6P087 351 aaKnown RBP16.66■□□□□ 0.26
RAB40C-206ENST00000561781 OPN5Q6U736 354 aa16.66■□□□□ 0.26
RAB40C-206ENST00000561781 Q6ZNB5 142 aa16.66■□□□□ 0.26
RAB40C-206ENST00000561781 MED25Q71SY5 747 aa16.66■□□□□ 0.26
RAB40C-206ENST00000561781 TMEM25Q86YD3 366 aa16.66■□□□□ 0.26
RAB40C-206ENST00000561781 ZNF101Q8IZC7 436 aa16.66■□□□□ 0.26
RAB40C-206ENST00000561781 LFNGQ8NES3 379 aa16.66■□□□□ 0.26
RAB40C-206ENST00000561781 CCDC74AQ96AQ1 378 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms