RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 LANCL1O43813 399 aa11.28□□□□□ -0.6
SNX1-211ENST00000560829 ERCC1P07992 297 aaPredicted RBP11.28□□□□□ -0.6
SNX1-211ENST00000560829 ZNF20P17024 532 aa11.28□□□□□ -0.6
SNX1-211ENST00000560829 RAB3AP20336 220 aa11.28□□□□□ -0.6
SNX1-211ENST00000560829 GNALP38405 381 aa11.28□□□□□ -0.6
SNX1-211ENST00000560829 MAP2K3P46734 347 aa11.28□□□□□ -0.6
SNX1-211ENST00000560829 SLC6A9P48067 706 aa11.28□□□□□ -0.6
SNX1-211ENST00000560829 PTH2RP49190 550 aa11.28□□□□□ -0.6
SNX1-211ENST00000560829 MRPS10P82664 201 aaKnown RBP11.28□□□□□ -0.6
SNX1-211ENST00000560829 C2orf76Q3KRA6 126 aa11.28□□□□□ -0.6
SNX1-211ENST00000560829 GLYATL3Q5SZD4 288 aa11.28□□□□□ -0.6
SNX1-211ENST00000560829 COMMD2Q86X83 199 aa11.28□□□□□ -0.6
SNX1-211ENST00000560829 PTX4Q96A99 478 aa11.28□□□□□ -0.6
SNX1-211ENST00000560829 SARAFQ96BY9 339 aa11.28□□□□□ -0.6
SNX1-211ENST00000560829 FAM71F1Q96KD3 344 aaPredicted RBP11.28□□□□□ -0.6
SNX1-211ENST00000560829 SORCS2Q96PQ0 1159 aa11.28□□□□□ -0.6
SNX1-211ENST00000560829 TAAR6Q96RI8 345 aa11.28□□□□□ -0.6
SNX1-211ENST00000560829 SCNM1Q9BWG6 230 aa11.28□□□□□ -0.6
SNX1-211ENST00000560829 OR10A2Q9H208 303 aa11.28□□□□□ -0.6
SNX1-211ENST00000560829 METTL17Q9H7H0 456 aaPredicted RBP11.28□□□□□ -0.6
SNX1-211ENST00000560829 RBFOX1Q9NWB1 397 aaKnown RBP11.28□□□□□ -0.6
SNX1-211ENST00000560829 ZNF224Q9NZL3 707 aa11.28□□□□□ -0.6
SNX1-211ENST00000560829 UPB1Q9UBR1 384 aa11.28□□□□□ -0.6
SNX1-211ENST00000560829 N6AMT1Q9Y5N5 214 aa11.28□□□□□ -0.6
SNX1-211ENST00000560829 LINC00854A0A1B0GVQ3 168 aa11.27□□□□□ -0.6
SNX1-211ENST00000560829 DHRS7CA6NNS2 312 aa11.27□□□□□ -0.6
SNX1-211ENST00000560829 EEF1E1O43324 174 aaKnown RBP11.27□□□□□ -0.6
SNX1-211ENST00000560829 LYRM1O43325 122 aa11.27□□□□□ -0.6
SNX1-211ENST00000560829 DHRS3O75911 302 aa11.27□□□□□ -0.6
SNX1-211ENST00000560829 PATE4P0C8F1 98 aa11.27□□□□□ -0.6
SNX1-211ENST00000560829 FAM157BP0CG42 384 aa11.27□□□□□ -0.6
SNX1-211ENST00000560829 ABOP16442 354 aa11.27□□□□□ -0.6
SNX1-211ENST00000560829 CDK2P24941 298 aa11.27□□□□□ -0.6
SNX1-211ENST00000560829 HTR5AP47898 357 aa11.27□□□□□ -0.6
SNX1-211ENST00000560829 INPP1P49441 399 aa11.27□□□□□ -0.6
SNX1-211ENST00000560829 PLA2G7Q13093 441 aa11.27□□□□□ -0.6
SNX1-211ENST00000560829 SLC36A2Q495M3 483 aa11.27□□□□□ -0.6
SNX1-211ENST00000560829 MZT2BQ6NZ67 158 aa11.27□□□□□ -0.6
SNX1-211ENST00000560829 RPUSD3Q6P087 351 aaKnown RBP11.27□□□□□ -0.6
SNX1-211ENST00000560829 FGD2Q7Z6J4 655 aa11.27□□□□□ -0.6
SNX1-211ENST00000560829 ZNF100Q8IYN0 542 aa11.27□□□□□ -0.6
SNX1-211ENST00000560829 CADM3Q8N126 398 aa11.27□□□□□ -0.6
SNX1-211ENST00000560829 OR5AS1Q8N127 324 aa11.27□□□□□ -0.6
SNX1-211ENST00000560829 OR13C9Q8NGT0 318 aa11.27□□□□□ -0.6
SNX1-211ENST00000560829 AKR7LQ8NHP1 331 aa11.27□□□□□ -0.6
SNX1-211ENST00000560829 ZFP3Q96NJ6 502 aa11.27□□□□□ -0.6
SNX1-211ENST00000560829 NEDD4LQ96PU5 975 aa11.27□□□□□ -0.6
SNX1-211ENST00000560829 PLEKHA1Q9HB21 404 aa11.27□□□□□ -0.6
SNX1-211ENST00000560829 CGGBP1Q9UFW8 167 aaPredicted RBP11.27□□□□□ -0.6
SNX1-211ENST00000560829 ZNF391Q9UJN7 358 aa11.27□□□□□ -0.6
SNX1-211ENST00000560829 MRPS7Q9Y2R9 242 aaKnown RBP11.27□□□□□ -0.6
SNX1-211ENST00000560829 CACNA1CQ13936 2221 aa11.27□□□□□ -0.6
SNX1-211ENST00000560829 TMEM272A0A1B0GTI8 110 aa11.27□□□□□ -0.61
SNX1-211ENST00000560829 XRCC3O43542 346 aa11.27□□□□□ -0.61
SNX1-211ENST00000560829 ALX3O95076 343 aa11.27□□□□□ -0.61
SNX1-211ENST00000560829 ALDOBP05062 364 aa11.27□□□□□ -0.61
SNX1-211ENST00000560829 COX5BP10606 129 aa11.27□□□□□ -0.61
SNX1-211ENST00000560829 GABRA1P14867 456 aa11.27□□□□□ -0.61
SNX1-211ENST00000560829 ARSBP15848 533 aa11.27□□□□□ -0.61
SNX1-211ENST00000560829 SPINK2P20155 84 aa11.27□□□□□ -0.61
SNX1-211ENST00000560829 HOXD11P31277 338 aaPredicted RBP11.27□□□□□ -0.61
SNX1-211ENST00000560829 THBS4P35443 961 aa11.27□□□□□ -0.61
SNX1-211ENST00000560829 EIF2S3P41091 472 aaKnown RBP11.27□□□□□ -0.61
SNX1-211ENST00000560829 RANBP1P43487 201 aa11.27□□□□□ -0.61
SNX1-211ENST00000560829 OR3A2P47893 321 aa11.27□□□□□ -0.61
SNX1-211ENST00000560829 DGCR2P98153 550 aa11.27□□□□□ -0.61
SNX1-211ENST00000560829 HGFACQ04756 655 aa11.27□□□□□ -0.61
SNX1-211ENST00000560829 GUSBP1Q15486 140 aa11.27□□□□□ -0.61
SNX1-211ENST00000560829 TMEM69Q5SWH9 247 aa11.27□□□□□ -0.61
SNX1-211ENST00000560829 SFRP5Q5T4F7 317 aa11.27□□□□□ -0.61
SNX1-211ENST00000560829 DNM1P46Q6ZS02 220 aa11.27□□□□□ -0.61
SNX1-211ENST00000560829 IZUMO1Q8IYV9 350 aa11.27□□□□□ -0.61
SNX1-211ENST00000560829 JAGN1Q8N5M9 183 aa11.27□□□□□ -0.61
SNX1-211ENST00000560829 DUSP18Q8NEJ0 188 aa11.27□□□□□ -0.61
SNX1-211ENST00000560829 OR52N4Q8NGI2 321 aa11.27□□□□□ -0.61
SNX1-211ENST00000560829 CUL9Q8IWT3 2517 aa11.27□□□□□ -0.61
SNX1-211ENST00000560829 LOC400499M0QZD8 3231 aa11.26□□□□□ -0.61
SNX1-211ENST00000560829 CIB4A0PJX0 185 aa11.26□□□□□ -0.61
SNX1-211ENST00000560829 GABARAPH6UMI1 98 aa11.26□□□□□ -0.61
SNX1-211ENST00000560829 MTRF1O75570 445 aaKnown RBP11.26□□□□□ -0.61
SNX1-211ENST00000560829 CTAG2O75638 210 aa11.26□□□□□ -0.61
SNX1-211ENST00000560829 WISP2O76076 250 aa11.26□□□□□ -0.61
SNX1-211ENST00000560829 PDGFAP04085 211 aa11.26□□□□□ -0.61
SNX1-211ENST00000560829 EFNB2P52799 333 aa11.26□□□□□ -0.61
SNX1-211ENST00000560829 FOXG1P55316 489 aaPredicted RBP11.26□□□□□ -0.61
SNX1-211ENST00000560829 TAS2R20P59543 309 aa11.26□□□□□ -0.61
SNX1-211ENST00000560829 FAPQ12884 760 aa11.26□□□□□ -0.61
SNX1-211ENST00000560829 GFOD2Q3B7J2 385 aa11.26□□□□□ -0.61
SNX1-211ENST00000560829 SNAI3Q3KNW1 292 aa11.26□□□□□ -0.61
SNX1-211ENST00000560829 PABPC1L2AQ5JQF8 200 aa11.26□□□□□ -0.61
SNX1-211ENST00000560829 FBXW9Q5XUX1 488 aa11.26□□□□□ -0.61
SNX1-211ENST00000560829 ZNF57Q68EA5 555 aaPredicted RBP11.26□□□□□ -0.61
SNX1-211ENST00000560829 OR4D6Q8NGJ1 314 aa11.26□□□□□ -0.61
SNX1-211ENST00000560829 SSC4DQ8WTU2 575 aa11.26□□□□□ -0.61
SNX1-211ENST00000560829 PP6455Q8WZ26 134 aa11.26□□□□□ -0.61
SNX1-211ENST00000560829 SGK3Q96BR1 496 aa11.26□□□□□ -0.61
SNX1-211ENST00000560829 ITPKCQ96DU7 683 aa11.26□□□□□ -0.61
SNX1-211ENST00000560829 RGCCQ9H4X1 137 aa11.26□□□□□ -0.61
SNX1-211ENST00000560829 CNTD2Q9H8S5 307 aa11.26□□□□□ -0.61
SNX1-211ENST00000560829 RBMX2Q9Y388 322 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms