RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 FGF9P31371 208 aaPredicted RBP8.86□□□□□ -0.99
SRP54-208ENST00000555557 CCKARP32238 428 aa8.86□□□□□ -0.99
SRP54-208ENST00000555557 SERPINB10P48595 397 aa8.86□□□□□ -0.99
SRP54-208ENST00000555557 MXD1Q05195 221 aa8.86□□□□□ -0.99
SRP54-208ENST00000555557 ZMAT1Q5H9K5 638 aa8.86□□□□□ -0.99
SRP54-208ENST00000555557 DRAM2Q6UX65 266 aa8.86□□□□□ -0.99
SRP54-208ENST00000555557 GDPGP1Q6ZNW5 385 aa8.86□□□□□ -0.99
SRP54-208ENST00000555557 Q6ZNX1 250 aa8.86□□□□□ -0.99
SRP54-208ENST00000555557 DPPA2Q7Z7J5 298 aa8.86□□□□□ -0.99
SRP54-208ENST00000555557 COMMD2Q86X83 199 aa8.86□□□□□ -0.99
SRP54-208ENST00000555557 CCDC36Q8IYA8 594 aa8.86□□□□□ -0.99
SRP54-208ENST00000555557 GALNT11Q8NCW6 608 aa8.86□□□□□ -0.99
SRP54-208ENST00000555557 SLC30A7Q8NEW0 376 aa8.86□□□□□ -0.99
SRP54-208ENST00000555557 OR2AE1Q8NHA4 323 aa8.86□□□□□ -0.99
SRP54-208ENST00000555557 C17orf50Q8WW18 174 aa8.86□□□□□ -0.99
SRP54-208ENST00000555557 LYZL4Q96KX0 146 aa8.86□□□□□ -0.99
SRP54-208ENST00000555557 ACTR6Q9GZN1 396 aa8.86□□□□□ -0.99
SRP54-208ENST00000555557 SLC25A15Q9Y619 301 aa8.86□□□□□ -0.99
SRP54-208ENST00000555557 CFAP46Q8IYW2 2715 aa8.85□□□□□ -0.99
SRP54-208ENST00000555557 NKX2-6A6NCS4 301 aa8.85□□□□□ -0.99
SRP54-208ENST00000555557 ZNF879B4DU55 563 aa8.85□□□□□ -0.99
SRP54-208ENST00000555557 B8ZZF3 427 aa8.85□□□□□ -0.99
SRP54-208ENST00000555557 SLC22A1O15245 554 aa8.85□□□□□ -0.99
SRP54-208ENST00000555557 NGFP01138 241 aa8.85□□□□□ -0.99
SRP54-208ENST00000555557 CLEC2LP0C7M8 214 aa8.85□□□□□ -0.99
SRP54-208ENST00000555557 SDC2P34741 201 aa8.85□□□□□ -0.99
SRP54-208ENST00000555557 APLNRP35414 380 aa8.85□□□□□ -0.99
SRP54-208ENST00000555557 UGT2B10P36537 528 aa8.85□□□□□ -0.99
SRP54-208ENST00000555557 SNTB1Q13884 538 aaKnown RBP8.85□□□□□ -0.99
SRP54-208ENST00000555557 TRAM1Q15629 374 aa8.85□□□□□ -0.99
SRP54-208ENST00000555557 TAB1Q15750 504 aa8.85□□□□□ -0.99
SRP54-208ENST00000555557 ZNF704Q6ZNC4 412 aaPredicted RBP8.85□□□□□ -0.99
SRP54-208ENST00000555557 ZNF843Q8N446 348 aa8.85□□□□□ -0.99
SRP54-208ENST00000555557 C17orf78Q8N4C9 275 aa8.85□□□□□ -0.99
SRP54-208ENST00000555557 GPR148Q8TDV2 347 aa8.85□□□□□ -0.99
SRP54-208ENST00000555557 TSEN15Q8WW01 171 aaKnown RBP8.85□□□□□ -0.99
SRP54-208ENST00000555557 KCTD7Q96MP8 289 aa8.85□□□□□ -0.99
SRP54-208ENST00000555557 DCSTAMPQ9H295 470 aa8.85□□□□□ -0.99
SRP54-208ENST00000555557 OR51B6Q9H340 312 aa8.85□□□□□ -0.99
SRP54-208ENST00000555557 TPK1Q9H3S4 243 aa8.85□□□□□ -0.99
SRP54-208ENST00000555557 MOB1AQ9H8S9 216 aa8.85□□□□□ -0.99
SRP54-208ENST00000555557 NOX4Q9NPH5 578 aa8.85□□□□□ -0.99
SRP54-208ENST00000555557 GPR84Q9NQS5 396 aa8.85□□□□□ -0.99
SRP54-208ENST00000555557 ELOVL5Q9NYP7 299 aa8.85□□□□□ -0.99
SRP54-208ENST00000555557 COQ3Q9NZJ6 369 aa8.85□□□□□ -0.99
SRP54-208ENST00000555557 GSTK1Q9Y2Q3 226 aa8.85□□□□□ -0.99
SRP54-208ENST00000555557 ADGRG4Q8IZF6 3080 aa8.84□□□□□ -0.99
SRP54-208ENST00000555557 TRBV5-5A0A0J9YX44 114 aa8.84□□□□□ -0.99
SRP54-208ENST00000555557 A0A1B0GTI1 187 aa8.84□□□□□ -0.99
SRP54-208ENST00000555557 TRIM64BA6NI03 449 aa8.84□□□□□ -0.99
SRP54-208ENST00000555557 C16orf97H3BN30 126 aa8.84□□□□□ -0.99
SRP54-208ENST00000555557 SYT7O43581 403 aa8.84□□□□□ -0.99
SRP54-208ENST00000555557 C1QL1O75973 258 aa8.84□□□□□ -0.99
SRP54-208ENST00000555557 CDRT1O95170 752 aa8.84□□□□□ -0.99
SRP54-208ENST00000555557 SERPINA3P01011 423 aa8.84□□□□□ -0.99
SRP54-208ENST00000555557 IGKV3-15P01624 115 aa8.84□□□□□ -0.99
SRP54-208ENST00000555557 APOC1P02654 83 aa8.84□□□□□ -0.99
SRP54-208ENST00000555557 ISG15P05161 165 aa8.84□□□□□ -0.99
SRP54-208ENST00000555557 UBCP0CG48 685 aaKnown RBP8.84□□□□□ -0.99
SRP54-208ENST00000555557 COX5BP10606 129 aa8.84□□□□□ -0.99
SRP54-208ENST00000555557 CBR1P16152 277 aa8.84□□□□□ -0.99
SRP54-208ENST00000555557 CHRNB4P30926 498 aa8.84□□□□□ -0.99
SRP54-208ENST00000555557 RPS19P39019 145 aaKnown RBP8.84□□□□□ -0.99
SRP54-208ENST00000555557 Q499Y3 187 aa8.84□□□□□ -0.99
SRP54-208ENST00000555557 TIMM23BQ5SRD1 257 aa8.84□□□□□ -0.99
SRP54-208ENST00000555557 TMEM244Q5VVB8 128 aa8.84□□□□□ -0.99
SRP54-208ENST00000555557 UNQ9370/PRO34162Q6UXP9 181 aa8.84□□□□□ -0.99
SRP54-208ENST00000555557 ZNF101Q8IZC7 436 aa8.84□□□□□ -0.99
SRP54-208ENST00000555557 ASB5Q8WWX0 329 aa8.84□□□□□ -0.99
SRP54-208ENST00000555557 TMEM106AQ96A25 262 aa8.84□□□□□ -0.99
SRP54-208ENST00000555557 SGK3Q96BR1 496 aa8.84□□□□□ -0.99
SRP54-208ENST00000555557 FAM71F1Q96KD3 344 aaPredicted RBP8.84□□□□□ -0.99
SRP54-208ENST00000555557 DERL3Q96Q80 235 aa8.84□□□□□ -0.99
SRP54-208ENST00000555557 KCNS3Q9BQ31 491 aa8.84□□□□□ -0.99
SRP54-208ENST00000555557 BCL7BQ9BQE9 202 aa8.84□□□□□ -0.99
SRP54-208ENST00000555557 ATPIF1Q9UII2 106 aa8.84□□□□□ -0.99
SRP54-208ENST00000555557 ERRFI1Q9UJM3 462 aaPredicted RBP8.84□□□□□ -0.99
SRP54-208ENST00000555557 HHLA2Q9UM44 414 aa8.84□□□□□ -0.99
SRP54-208ENST00000555557 DIDO1Q9BTC0 2240 aaKnown RBP8.84□□□□□ -0.99
SRP54-208ENST00000555557 A0A1B0GUH1 482 aa8.84□□□□□ -1
SRP54-208ENST00000555557 GATBO75879 557 aaKnown RBP8.84□□□□□ -1
SRP54-208ENST00000555557 NCR1O76036 304 aa8.84□□□□□ -1
SRP54-208ENST00000555557 ACHEP22303 614 aa8.84□□□□□ -1
SRP54-208ENST00000555557 GALP22466 123 aa8.84□□□□□ -1
SRP54-208ENST00000555557 WNT5AP41221 380 aa8.84□□□□□ -1
SRP54-208ENST00000555557 ZNF83P51522 516 aa8.84□□□□□ -1
SRP54-208ENST00000555557 CAV3P56539 151 aa8.84□□□□□ -1
SRP54-208ENST00000555557 GLYATL3Q5SZD4 288 aa8.84□□□□□ -1
SRP54-208ENST00000555557 USP43Q70EL4 1123 aa8.84□□□□□ -1
SRP54-208ENST00000555557 STEAP2Q8NFT2 490 aa8.84□□□□□ -1
SRP54-208ENST00000555557 OR13C3Q8NGS6 347 aa8.84□□□□□ -1
SRP54-208ENST00000555557 MUCL1Q96DR8 90 aa8.84□□□□□ -1
SRP54-208ENST00000555557 ZC3HAV1LQ96H79 300 aaKnown RBP8.84□□□□□ -1
SRP54-208ENST00000555557 C1QTNF5Q9BXJ0 243 aa8.84□□□□□ -1
SRP54-208ENST00000555557 OR10A2Q9H208 303 aa8.84□□□□□ -1
SRP54-208ENST00000555557 SNTG1Q9NSN8 517 aa8.84□□□□□ -1
SRP54-208ENST00000555557 NPAP1Q9NZP6 1156 aa8.84□□□□□ -1
SRP54-208ENST00000555557 DHDHQ9UQ10 334 aa8.84□□□□□ -1
SRP54-208ENST00000555557 AMDHD2Q9Y303 409 aa8.84□□□□□ -1
SRP54-208ENST00000555557 IGHV1-18A0A0C4DH31 117 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms