RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 GSG1Q2KHT4 349 aa7.03□□□□□ -1.28
DEPDC4-207ENST00000549249 SNAI3Q3KNW1 292 aa7.03□□□□□ -1.28
DEPDC4-207ENST00000549249 SLC36A2Q495M3 483 aa7.03□□□□□ -1.28
DEPDC4-207ENST00000549249 ACSM3Q53FZ2 586 aa7.03□□□□□ -1.28
DEPDC4-207ENST00000549249 BCL2L15Q5TBC7 163 aa7.03□□□□□ -1.28
DEPDC4-207ENST00000549249 STAC2Q6ZMT1 411 aa7.03□□□□□ -1.28
DEPDC4-207ENST00000549249 FAM57BQ71RH2 274 aa7.03□□□□□ -1.28
DEPDC4-207ENST00000549249 BHLHA15Q7RTS1 189 aaPredicted RBP7.03□□□□□ -1.28
DEPDC4-207ENST00000549249 MRGPRGQ86SM5 289 aa7.03□□□□□ -1.28
DEPDC4-207ENST00000549249 LUZP2Q86TE4 346 aa7.03□□□□□ -1.28
DEPDC4-207ENST00000549249 ELMOD2Q8IZ81 293 aa7.03□□□□□ -1.28
DEPDC4-207ENST00000549249 MS4A15Q8N5U1 240 aa7.03□□□□□ -1.28
DEPDC4-207ENST00000549249 ZNF676Q8N7Q3 588 aa7.03□□□□□ -1.28
DEPDC4-207ENST00000549249 DYNC2LI1Q8TCX1 351 aa7.03□□□□□ -1.28
DEPDC4-207ENST00000549249 ORAI1Q96D31 301 aa7.03□□□□□ -1.28
DEPDC4-207ENST00000549249 ZNF799Q96GE5 643 aa7.03□□□□□ -1.28
DEPDC4-207ENST00000549249 OR14A2Q96R54 314 aa7.03□□□□□ -1.28
DEPDC4-207ENST00000549249 SOX7Q9BT81 388 aa7.03□□□□□ -1.28
DEPDC4-207ENST00000549249 DCUN1D5Q9BTE7 237 aa7.03□□□□□ -1.28
DEPDC4-207ENST00000549249 COMMD4Q9H0A8 199 aa7.03□□□□□ -1.28
DEPDC4-207ENST00000549249 DCSTAMPQ9H295 470 aa7.03□□□□□ -1.28
DEPDC4-207ENST00000549249 KCNN2Q9H2S1 579 aa7.03□□□□□ -1.28
DEPDC4-207ENST00000549249 PIGMQ9H3S5 423 aa7.03□□□□□ -1.28
DEPDC4-207ENST00000549249 MOB1AQ9H8S9 216 aa7.03□□□□□ -1.28
DEPDC4-207ENST00000549249 JKAMPQ9P055 326 aa7.03□□□□□ -1.28
DEPDC4-207ENST00000549249 ATPIF1Q9UII2 106 aa7.03□□□□□ -1.28
DEPDC4-207ENST00000549249 DIDO1Q9BTC0 2240 aaKnown RBP7.03□□□□□ -1.28
DEPDC4-207ENST00000549249 HCFC1P51610 2035 aa7.02□□□□□ -1.29
DEPDC4-207ENST00000549249 TRBV5-7A0A0A0MS05 114 aa7.02□□□□□ -1.29
DEPDC4-207ENST00000549249 ACOD1A6NK06 481 aa7.02□□□□□ -1.29
DEPDC4-207ENST00000549249 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.02□□□□□ -1.29
DEPDC4-207ENST00000549249 ZNF879B4DU55 563 aa7.02□□□□□ -1.29
DEPDC4-207ENST00000549249 EEF1E1-BLOC1S5C9J1V9 151 aa7.02□□□□□ -1.29
DEPDC4-207ENST00000549249 P2RY10O00398 339 aa7.02□□□□□ -1.29
DEPDC4-207ENST00000549249 EEF1E1O43324 174 aaKnown RBP7.02□□□□□ -1.29
DEPDC4-207ENST00000549249 LMX1BO60663 402 aa7.02□□□□□ -1.29
DEPDC4-207ENST00000549249 ISG15P05161 165 aa7.02□□□□□ -1.29
DEPDC4-207ENST00000549249 CELA3BP08861 270 aa7.02□□□□□ -1.29
DEPDC4-207ENST00000549249 UCHL1P09936 223 aa7.02□□□□□ -1.29
DEPDC4-207ENST00000549249 ZNF14P17017 642 aaPredicted RBP7.02□□□□□ -1.29
DEPDC4-207ENST00000549249 PSMB1P20618 241 aaKnown RBP7.02□□□□□ -1.29
DEPDC4-207ENST00000549249 OPRM1P35372 400 aa7.02□□□□□ -1.29
DEPDC4-207ENST00000549249 ARR3P36575 388 aa7.02□□□□□ -1.29
DEPDC4-207ENST00000549249 ADORA2A-AS1P86434 159 aa7.02□□□□□ -1.29
DEPDC4-207ENST00000549249 ECH1Q13011 328 aa7.02□□□□□ -1.29
DEPDC4-207ENST00000549249 P2RY6Q15077 328 aa7.02□□□□□ -1.29
DEPDC4-207ENST00000549249 YIF1BQ5BJH7 314 aa7.02□□□□□ -1.29
DEPDC4-207ENST00000549249 ZMAT1Q5H9K5 638 aa7.02□□□□□ -1.29
DEPDC4-207ENST00000549249 ASPHD2Q6ICH7 369 aa7.02□□□□□ -1.29
DEPDC4-207ENST00000549249 TMEM211Q6ICI0 200 aa7.02□□□□□ -1.29
DEPDC4-207ENST00000549249 TMEM53Q6P2H8 277 aa7.02□□□□□ -1.29
DEPDC4-207ENST00000549249 USP43Q70EL4 1123 aa7.02□□□□□ -1.29
DEPDC4-207ENST00000549249 CEACAM19Q7Z692 300 aa7.02□□□□□ -1.29
DEPDC4-207ENST00000549249 DPPA2Q7Z7J5 298 aa7.02□□□□□ -1.29
DEPDC4-207ENST00000549249 C17orf78Q8N4C9 275 aa7.02□□□□□ -1.29
DEPDC4-207ENST00000549249 PAQR4Q8N4S7 273 aaPredicted RBP7.02□□□□□ -1.29
DEPDC4-207ENST00000549249 KBTBD8Q8NFY9 601 aa7.02□□□□□ -1.29
DEPDC4-207ENST00000549249 RND1Q92730 232 aa7.02□□□□□ -1.29
DEPDC4-207ENST00000549249 SPTSSAQ969W0 71 aa7.02□□□□□ -1.29
DEPDC4-207ENST00000549249 POM121L2Q96KW2 1035 aa7.02□□□□□ -1.29
DEPDC4-207ENST00000549249 LYZL4Q96KX0 146 aa7.02□□□□□ -1.29
DEPDC4-207ENST00000549249 DERL3Q96Q80 235 aa7.02□□□□□ -1.29
DEPDC4-207ENST00000549249 KRTAP9-2Q9BYQ4 174 aa7.02□□□□□ -1.29
DEPDC4-207ENST00000549249 NOX4Q9NPH5 578 aa7.02□□□□□ -1.29
DEPDC4-207ENST00000549249 GALNT8Q9NY28 637 aa7.02□□□□□ -1.29
DEPDC4-207ENST00000549249 PTTG2Q9NZH5 202 aa7.02□□□□□ -1.29
DEPDC4-207ENST00000549249 ZNF629Q9UEG4 869 aaPredicted RBP7.02□□□□□ -1.29
DEPDC4-207ENST00000549249 PMF1-BGLAPU3KQ54 211 aa7.02□□□□□ -1.29
DEPDC4-207ENST00000549249 HIVEP3Q5T1R4 2406 aa7.01□□□□□ -1.29
DEPDC4-207ENST00000549249 LRRK2Q5S007 2527 aa7.01□□□□□ -1.29
DEPDC4-207ENST00000549249 NBASA2RRP1 2371 aa7.01□□□□□ -1.29
DEPDC4-207ENST00000549249 A0A1W2PPK0 400 aa7.01□□□□□ -1.29
DEPDC4-207ENST00000549249 SMIM30A4D0T7 59 aa7.01□□□□□ -1.29
DEPDC4-207ENST00000549249 OR5H1A6NKK0 313 aa7.01□□□□□ -1.29
DEPDC4-207ENST00000549249 CCL21O00585 134 aa7.01□□□□□ -1.29
DEPDC4-207ENST00000549249 GATBO75879 557 aaKnown RBP7.01□□□□□ -1.29
DEPDC4-207ENST00000549249 AGFG2O95081 481 aa7.01□□□□□ -1.29
DEPDC4-207ENST00000549249 CDRT1O95170 752 aa7.01□□□□□ -1.29
DEPDC4-207ENST00000549249 SERPINA3P01011 423 aa7.01□□□□□ -1.29
DEPDC4-207ENST00000549249 ANXA2P07355 339 aaKnown RBP7.01□□□□□ -1.29
DEPDC4-207ENST00000549249 UBCP0CG48 685 aaKnown RBP7.01□□□□□ -1.29
DEPDC4-207ENST00000549249 CCL2P13500 99 aa7.01□□□□□ -1.29
DEPDC4-207ENST00000549249 ACHEP22303 614 aa7.01□□□□□ -1.29
DEPDC4-207ENST00000549249 CCL1P22362 96 aa7.01□□□□□ -1.29
DEPDC4-207ENST00000549249 CALRP27797 417 aaKnown RBP7.01□□□□□ -1.29
DEPDC4-207ENST00000549249 SDC2P34741 201 aa7.01□□□□□ -1.29
DEPDC4-207ENST00000549249 RPS19P39019 145 aaKnown RBP7.01□□□□□ -1.29
DEPDC4-207ENST00000549249 WNT5AP41221 380 aa7.01□□□□□ -1.29
DEPDC4-207ENST00000549249 UQCRFS1P47985 274 aa7.01□□□□□ -1.29
DEPDC4-207ENST00000549249 SLC6A9P48067 706 aa7.01□□□□□ -1.29
DEPDC4-207ENST00000549249 SOX2P48431 317 aa7.01□□□□□ -1.29
DEPDC4-207ENST00000549249 CASP6P55212 293 aa7.01□□□□□ -1.29
DEPDC4-207ENST00000549249 TPTEP56180 551 aa7.01□□□□□ -1.29
DEPDC4-207ENST00000549249 UBE2NP61088 152 aaKnown RBP7.01□□□□□ -1.29
DEPDC4-207ENST00000549249 FAM27E3Q08E93 113 aa7.01□□□□□ -1.29
DEPDC4-207ENST00000549249 Q499Y3 187 aa7.01□□□□□ -1.29
DEPDC4-207ENST00000549249 ZNF544Q6NX49 715 aa7.01□□□□□ -1.29
DEPDC4-207ENST00000549249 DRAM2Q6UX65 266 aa7.01□□□□□ -1.29
DEPDC4-207ENST00000549249 ZNF704Q6ZNC4 412 aaPredicted RBP7.01□□□□□ -1.29
DEPDC4-207ENST00000549249 COLCA1Q6ZS62 124 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms