RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 PLEKHA8Q96JA3 519 aa14.51□□□□□ -0.09
CHMP1A-205ENST00000548650 ZNF747Q9BV97 191 aa14.51□□□□□ -0.09
CHMP1A-205ENST00000548650 MS4A7Q9GZW8 240 aaPredicted RBP14.51□□□□□ -0.09
CHMP1A-205ENST00000548650 PCDHGB1Q9Y5G3 927 aa14.51□□□□□ -0.09
CHMP1A-205ENST00000548650 SOX21Q9Y651 276 aaPredicted RBP14.51□□□□□ -0.09
CHMP1A-205ENST00000548650 COMMD3-BMI1R4GMX3 469 aa14.51□□□□□ -0.09
CHMP1A-205ENST00000548650 MEGF8Q7Z7M0 2845 aa14.5□□□□□ -0.09
CHMP1A-205ENST00000548650 TVP23AA6NH52 213 aa14.5□□□□□ -0.09
CHMP1A-205ENST00000548650 CD300LBA8K4G0 201 aa14.5□□□□□ -0.09
CHMP1A-205ENST00000548650 PHYHO14832 338 aa14.5□□□□□ -0.09
CHMP1A-205ENST00000548650 PTBP3O95758 552 aaKnown RBP14.5□□□□□ -0.09
CHMP1A-205ENST00000548650 IRF2P14316 349 aa14.5□□□□□ -0.09
CHMP1A-205ENST00000548650 MAGEA2P43356 314 aa14.5□□□□□ -0.09
CHMP1A-205ENST00000548650 ZNF92Q03936 586 aa14.5□□□□□ -0.09
CHMP1A-205ENST00000548650 MPPED2Q15777 294 aa14.5□□□□□ -0.09
CHMP1A-205ENST00000548650 SPATS1Q496A3 300 aa14.5□□□□□ -0.09
CHMP1A-205ENST00000548650 ZNF362Q5T0B9 420 aaPredicted RBP14.5□□□□□ -0.09
CHMP1A-205ENST00000548650 ZNF841Q6ZN19 808 aa14.5□□□□□ -0.09
CHMP1A-205ENST00000548650 DEFB107AQ8IZN7 70 aa14.5□□□□□ -0.09
CHMP1A-205ENST00000548650 C19orf18Q8NEA5 215 aa14.5□□□□□ -0.09
CHMP1A-205ENST00000548650 OR4C15Q8NGM1 316 aa14.5□□□□□ -0.09
CHMP1A-205ENST00000548650 OR11L1Q8NGX0 322 aa14.5□□□□□ -0.09
CHMP1A-205ENST00000548650 OR2T4Q8NH00 348 aa14.5□□□□□ -0.09
CHMP1A-205ENST00000548650 OR2AE1Q8NHA4 323 aa14.5□□□□□ -0.09
CHMP1A-205ENST00000548650 SPRYD4Q8WW59 207 aaPredicted RBP14.5□□□□□ -0.09
CHMP1A-205ENST00000548650 SPTSSAQ969W0 71 aa14.5□□□□□ -0.09
CHMP1A-205ENST00000548650 ADAT1Q9BUB4 502 aaKnown RBP14.5□□□□□ -0.09
CHMP1A-205ENST00000548650 UFSP2Q9NUQ7 469 aa14.5□□□□□ -0.09
CHMP1A-205ENST00000548650 CTSZQ9UBR2 303 aa14.5□□□□□ -0.09
CHMP1A-205ENST00000548650 CLN8Q9UBY8 286 aa14.5□□□□□ -0.09
CHMP1A-205ENST00000548650 PKD1L1Q8TDX9 2849 aa14.5□□□□□ -0.09
CHMP1A-205ENST00000548650 KIR2DS1A0A191URI9 304 aa14.49□□□□□ -0.09
CHMP1A-205ENST00000548650 C22orf46C9J442 243 aa14.49□□□□□ -0.09
CHMP1A-205ENST00000548650 KRT36O76013 467 aa14.49□□□□□ -0.09
CHMP1A-205ENST00000548650 ZNF823P16415 610 aa14.49□□□□□ -0.09
CHMP1A-205ENST00000548650 CA6P23280 308 aa14.49□□□□□ -0.09
CHMP1A-205ENST00000548650 PSMB10P40306 273 aa14.49□□□□□ -0.09
CHMP1A-205ENST00000548650 HMGA2P52926 109 aa14.49□□□□□ -0.09
CHMP1A-205ENST00000548650 SLC9A3R2Q15599 337 aa14.49□□□□□ -0.09
CHMP1A-205ENST00000548650 GLYATL3Q5SZD4 288 aa14.49□□□□□ -0.09
CHMP1A-205ENST00000548650 WDR25Q64LD2 544 aaPredicted RBP14.49□□□□□ -0.09
CHMP1A-205ENST00000548650 C16orf89Q6UX73 402 aa14.49□□□□□ -0.09
CHMP1A-205ENST00000548650 CPLX4Q7Z7G2 160 aa14.49□□□□□ -0.09
CHMP1A-205ENST00000548650 FITM2Q8N6M3 262 aa14.49□□□□□ -0.09
CHMP1A-205ENST00000548650 SLC37A3Q8NCC5 494 aa14.49□□□□□ -0.09
CHMP1A-205ENST00000548650 OR51L1Q8NGJ5 315 aa14.49□□□□□ -0.09
CHMP1A-205ENST00000548650 OR9Q1Q8NGQ5 310 aa14.49□□□□□ -0.09
CHMP1A-205ENST00000548650 NUDT16L1Q9BRJ7 211 aaKnown RBP14.49□□□□□ -0.09
CHMP1A-205ENST00000548650 TRIM15Q9C019 465 aa14.49□□□□□ -0.09
CHMP1A-205ENST00000548650 IL20Q9NYY1 176 aa14.49□□□□□ -0.09
CHMP1A-205ENST00000548650 MDFIC2A0A1B0GVS7 189 aa14.48□□□□□ -0.09
CHMP1A-205ENST00000548650 TNFRSF11BO00300 401 aa14.48□□□□□ -0.09
CHMP1A-205ENST00000548650 DYNC1I1O14576 645 aa14.48□□□□□ -0.09
CHMP1A-205ENST00000548650 TMPRSS2O15393 492 aa14.48□□□□□ -0.09
CHMP1A-205ENST00000548650 MTNR1AP48039 350 aa14.48□□□□□ -0.09
CHMP1A-205ENST00000548650 OR8G1Q15617 311 aa14.48□□□□□ -0.09
CHMP1A-205ENST00000548650 PCK2Q16822 640 aa14.48□□□□□ -0.09
CHMP1A-205ENST00000548650 PRR31Q5SQ13 230 aa14.48□□□□□ -0.09
CHMP1A-205ENST00000548650 DRAM2Q6UX65 266 aa14.48□□□□□ -0.09
CHMP1A-205ENST00000548650 CYP2R1Q6VVX0 501 aa14.48□□□□□ -0.09
CHMP1A-205ENST00000548650 RASSF6Q6ZTQ3 369 aa14.48□□□□□ -0.09
CHMP1A-205ENST00000548650 DCXRQ7Z4W1 244 aa14.48□□□□□ -0.09
CHMP1A-205ENST00000548650 SLC25A28Q96A46 364 aa14.48□□□□□ -0.09
CHMP1A-205ENST00000548650 NMNAT2Q9BZQ4 307 aa14.48□□□□□ -0.09
CHMP1A-205ENST00000548650 SLC22A4Q9H015 551 aa14.48□□□□□ -0.09
CHMP1A-205ENST00000548650 TBC1D23Q9NUY8 699 aa14.48□□□□□ -0.09
CHMP1A-205ENST00000548650 NDE1Q9NXR1 346 aa14.48□□□□□ -0.09
CHMP1A-205ENST00000548650 NOP16Q9Y3C1 178 aaKnown RBP14.48□□□□□ -0.09
CHMP1A-205ENST00000548650 TRRAPQ9Y4A5 3859 aa14.48□□□□□ -0.09
CHMP1A-205ENST00000548650 TCRBV5S2A0A599 114 aa14.47□□□□□ -0.09
CHMP1A-205ENST00000548650 SPARCP09486 303 aa14.47□□□□□ -0.09
CHMP1A-205ENST00000548650 FGF12P61328 243 aa14.47□□□□□ -0.09
CHMP1A-205ENST00000548650 CRMP1Q14194 572 aa14.47□□□□□ -0.09
CHMP1A-205ENST00000548650 SHISA2Q6UWI4 295 aa14.47□□□□□ -0.09
CHMP1A-205ENST00000548650 LNX2Q8N448 690 aa14.47□□□□□ -0.09
CHMP1A-205ENST00000548650 LINC00471Q8N535 108 aa14.47□□□□□ -0.09
CHMP1A-205ENST00000548650 AQP11Q8NBQ7 271 aa14.47□□□□□ -0.09
CHMP1A-205ENST00000548650 OR4Q3Q8NH05 313 aa14.47□□□□□ -0.09
CHMP1A-205ENST00000548650 COPS4Q9BT78 406 aa14.47□□□□□ -0.09
CHMP1A-205ENST00000548650 FN3KRPQ9HA64 309 aa14.47□□□□□ -0.09
CHMP1A-205ENST00000548650 VNN3Q9NY84 501 aa14.47□□□□□ -0.09
CHMP1A-205ENST00000548650 MRPL15Q9P015 296 aaKnown RBP14.47□□□□□ -0.09
CHMP1A-205ENST00000548650 ACTR3BQ9P1U1 418 aa14.47□□□□□ -0.09
CHMP1A-205ENST00000548650 RNF7Q9UBF6 113 aa14.47□□□□□ -0.09
CHMP1A-205ENST00000548650 ARL2BPQ9Y2Y0 163 aa14.47□□□□□ -0.09
CHMP1A-205ENST00000548650 GGT3PA6NGU5 568 aa14.46□□□□□ -0.09
CHMP1A-205ENST00000548650 LGALS8O00214 317 aa14.46□□□□□ -0.09
CHMP1A-205ENST00000548650 WIPF1O43516 503 aa14.46□□□□□ -0.09
CHMP1A-205ENST00000548650 ENSAO43768 121 aaKnown RBP14.46□□□□□ -0.09
CHMP1A-205ENST00000548650 GMDSO60547 372 aa14.46□□□□□ -0.09
CHMP1A-205ENST00000548650 CCNB2O95067 398 aa14.46□□□□□ -0.09
CHMP1A-205ENST00000548650 GASTP01350 101 aa14.46□□□□□ -0.09
CHMP1A-205ENST00000548650 GYPBP06028 91 aa14.46□□□□□ -0.09
CHMP1A-205ENST00000548650 SLC2A1P11166 492 aa14.46□□□□□ -0.09
CHMP1A-205ENST00000548650 ENTPD1P49961 510 aa14.46□□□□□ -0.09
CHMP1A-205ENST00000548650 GNGT1P63211 74 aa14.46□□□□□ -0.09
CHMP1A-205ENST00000548650 PPP1R8Q12972 351 aaKnown RBP14.46□□□□□ -0.09
CHMP1A-205ENST00000548650 BRD3OSQ6XYD6 125 aa14.46□□□□□ -0.09
CHMP1A-205ENST00000548650 PIGWQ7Z7B1 504 aa14.46□□□□□ -0.09
CHMP1A-205ENST00000548650 OR56B2PQ8NGI1 322 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms