RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 NUDT9Q9BW91 350 aa11.3□□□□□ -0.6
COL4A6-209ENST00000545689 MED29Q9NX70 200 aa11.3□□□□□ -0.6
COL4A6-209ENST00000545689 WSB2Q9NYS7 404 aaPredicted RBP11.3□□□□□ -0.6
COL4A6-209ENST00000545689 FLVCR2Q9UPI3 526 aa11.3□□□□□ -0.6
COL4A6-209ENST00000545689 FER1L6Q2WGJ9 1857 aa11.3□□□□□ -0.6
COL4A6-209ENST00000545689 ZNF816-ZNF321PA0A0X1KG74 233 aa11.3□□□□□ -0.6
COL4A6-209ENST00000545689 NDUFB6O95139 128 aa11.3□□□□□ -0.6
COL4A6-209ENST00000545689 APOA2P02652 100 aa11.3□□□□□ -0.6
COL4A6-209ENST00000545689 AK3Q9UIJ7 227 aa11.3□□□□□ -0.6
COL4A6-209ENST00000545689 LAMP3Q9UQV4 416 aa11.3□□□□□ -0.6
COL4A6-209ENST00000545689 A0A0B4J203 849 aa11.3□□□□□ -0.6
COL4A6-209ENST00000545689 C20orf202A1L168 122 aa11.3□□□□□ -0.6
COL4A6-209ENST00000545689 TPPPO94811 219 aa11.3□□□□□ -0.6
COL4A6-209ENST00000545689 DCTDP32321 178 aa11.3□□□□□ -0.6
COL4A6-209ENST00000545689 ZNF121P58317 390 aaPredicted RBP11.3□□□□□ -0.6
COL4A6-209ENST00000545689 UQCC3Q6UW78 93 aa11.3□□□□□ -0.6
COL4A6-209ENST00000545689 ZNF808Q8N4W9 903 aaPredicted RBP11.3□□□□□ -0.6
COL4A6-209ENST00000545689 SPSB1Q96BD6 273 aa11.3□□□□□ -0.6
COL4A6-209ENST00000545689 CIB3Q96Q77 187 aaPredicted RBP11.3□□□□□ -0.6
COL4A6-209ENST00000545689 RNF32Q9H0A6 362 aa11.3□□□□□ -0.6
COL4A6-209ENST00000545689 C12orf49Q9H741 205 aa11.3□□□□□ -0.6
COL4A6-209ENST00000545689 SLAMF7Q9NQ25 335 aa11.3□□□□□ -0.6
COL4A6-209ENST00000545689 LRP12Q9Y561 859 aa11.3□□□□□ -0.6
COL4A6-209ENST00000545689 NUDCD2Q8WVJ2 157 aa11.3□□□□□ -0.6
COL4A6-209ENST00000545689 EID2BQ96D98 161 aa11.3□□□□□ -0.6
COL4A6-209ENST00000545689 RFPL4AA6NLU0 287 aa11.3□□□□□ -0.6
COL4A6-209ENST00000545689 RFPL4AL1F8VTS6 287 aa11.3□□□□□ -0.6
COL4A6-209ENST00000545689 AQP8O94778 261 aa11.3□□□□□ -0.6
COL4A6-209ENST00000545689 SNRPNP63162 240 aaKnown RBP11.3□□□□□ -0.6
COL4A6-209ENST00000545689 SSX1Q16384 188 aa11.3□□□□□ -0.6
COL4A6-209ENST00000545689 SLC25A30Q5SVS4 291 aa11.3□□□□□ -0.6
COL4A6-209ENST00000545689 TMEM182Q6ZP80 229 aaPredicted RBP11.3□□□□□ -0.6
COL4A6-209ENST00000545689 LINC01555Q8NAE3 123 aa11.3□□□□□ -0.6
COL4A6-209ENST00000545689 OR2V1Q8NHB1 315 aa11.3□□□□□ -0.6
COL4A6-209ENST00000545689 ADGRL4Q9HBW9 690 aa11.3□□□□□ -0.6
COL4A6-209ENST00000545689 DLL4Q9NR61 685 aa11.3□□□□□ -0.6
COL4A6-209ENST00000545689 NEU3Q9UQ49 428 aa11.3□□□□□ -0.6
COL4A6-209ENST00000545689 FAM166BA8MTA8 275 aa11.29□□□□□ -0.6
COL4A6-209ENST00000545689 MAGEB4O15481 346 aaPredicted RBP11.29□□□□□ -0.6
COL4A6-209ENST00000545689 OR5H8P0DN80 308 aa11.29□□□□□ -0.6
COL4A6-209ENST00000545689 SUMF1Q8NBK3 374 aa11.29□□□□□ -0.6
COL4A6-209ENST00000545689 SFT2D1Q8WV19 159 aa11.29□□□□□ -0.6
COL4A6-209ENST00000545689 OR2A5Q96R48 311 aa11.29□□□□□ -0.6
COL4A6-209ENST00000545689 SUCNR1Q9BXA5 334 aa11.29□□□□□ -0.6
COL4A6-209ENST00000545689 SSUH2Q9Y2M2 353 aa11.29□□□□□ -0.6
COL4A6-209ENST00000545689 SLC10A1Q14973 349 aa11.29□□□□□ -0.6
COL4A6-209ENST00000545689 TMEM128Q5BJH2 165 aa11.29□□□□□ -0.6
COL4A6-209ENST00000545689 OR10Z1Q8NGY1 313 aa11.29□□□□□ -0.6
COL4A6-209ENST00000545689 ATOH1Q92858 354 aaPredicted RBP11.29□□□□□ -0.6
COL4A6-209ENST00000545689 ZNF831Q5JPB2 1677 aa11.29□□□□□ -0.6
COL4A6-209ENST00000545689 NRG2O14511 850 aaPredicted RBP11.29□□□□□ -0.6
COL4A6-209ENST00000545689 GRPP07492 148 aa11.29□□□□□ -0.6
COL4A6-209ENST00000545689 FPR2P25090 351 aa11.29□□□□□ -0.6
COL4A6-209ENST00000545689 MPPED2Q15777 294 aa11.29□□□□□ -0.6
COL4A6-209ENST00000545689 LINC00303Q3SY05 128 aa11.29□□□□□ -0.6
COL4A6-209ENST00000545689 CLLU1Q5K131 121 aa11.29□□□□□ -0.6
COL4A6-209ENST00000545689 ZBTB37Q5TC79 503 aa11.29□□□□□ -0.6
COL4A6-209ENST00000545689 PXDC1Q5TGL8 231 aa11.29□□□□□ -0.6
COL4A6-209ENST00000545689 OSR2Q8N2R0 312 aa11.29□□□□□ -0.6
COL4A6-209ENST00000545689 SARAFQ96BY9 339 aa11.29□□□□□ -0.6
COL4A6-209ENST00000545689 KTI12Q96EK9 354 aaPredicted RBP11.29□□□□□ -0.6
COL4A6-209ENST00000545689 DERL3Q96Q80 235 aa11.29□□□□□ -0.6
COL4A6-209ENST00000545689 LIMS3P0CW19 117 aa11.29□□□□□ -0.6
COL4A6-209ENST00000545689 LIMS4P0CW20 117 aa11.29□□□□□ -0.6
COL4A6-209ENST00000545689 GALNSP34059 522 aa11.29□□□□□ -0.6
COL4A6-209ENST00000545689 EDDM3BP56851 147 aa11.29□□□□□ -0.6
COL4A6-209ENST00000545689 TMEM41BQ5BJD5 291 aa11.29□□□□□ -0.6
COL4A6-209ENST00000545689 ZNF626Q68DY1 528 aa11.29□□□□□ -0.6
COL4A6-209ENST00000545689 VHLLQ6RSH7 139 aa11.29□□□□□ -0.6
COL4A6-209ENST00000545689 SMIM15Q7Z3B0 74 aa11.29□□□□□ -0.6
COL4A6-209ENST00000545689 COMMD1Q8N668 190 aa11.29□□□□□ -0.6
COL4A6-209ENST00000545689 NEURL2Q9BR09 285 aa11.29□□□□□ -0.6
COL4A6-209ENST00000545689 SIRT3Q9NTG7 399 aaPredicted RBP11.29□□□□□ -0.6
COL4A6-209ENST00000545689 ANKRD10Q9NXR5 420 aa11.29□□□□□ -0.6
COL4A6-209ENST00000545689 LOXL2Q9Y4K0 774 aa11.29□□□□□ -0.6
COL4A6-209ENST00000545689 TRBV5-3A0A0A0MS03 114 aa11.29□□□□□ -0.6
COL4A6-209ENST00000545689 HS3ST1O14792 307 aa11.29□□□□□ -0.6
COL4A6-209ENST00000545689 PPP1R2P9O14990 202 aa11.29□□□□□ -0.6
COL4A6-209ENST00000545689 CLDN15P56746 228 aa11.29□□□□□ -0.6
COL4A6-209ENST00000545689 TIAL1Q01085 375 aaKnown RBP eCLIP11.29□□□□□ -0.6
COL4A6-209ENST00000545689 DEFA6Q01524 100 aa11.29□□□□□ -0.6
COL4A6-209ENST00000545689 ANKRD16Q6P6B7 361 aa11.29□□□□□ -0.6
COL4A6-209ENST00000545689 TEX261Q6UWH6 196 aa11.29□□□□□ -0.6
COL4A6-209ENST00000545689 SPICQ8N5J4 248 aa11.29□□□□□ -0.6
COL4A6-209ENST00000545689 ZNF321PQ8N8H1 164 aa11.29□□□□□ -0.6
COL4A6-209ENST00000545689 C10orf90Q96M02 699 aa11.29□□□□□ -0.6
COL4A6-209ENST00000545689 PTDSS2Q9BVG9 487 aa11.29□□□□□ -0.6
COL4A6-209ENST00000545689 U3KQ87 197 aa11.29□□□□□ -0.6
COL4A6-209ENST00000545689 C2CD4DB7Z1M9 353 aa11.28□□□□□ -0.6
COL4A6-209ENST00000545689 RAB35Q15286 201 aa11.28□□□□□ -0.6
COL4A6-209ENST00000545689 ADIRFQ15847 76 aa11.28□□□□□ -0.6
COL4A6-209ENST00000545689 TOR2AQ5JU69 321 aa11.28□□□□□ -0.6
COL4A6-209ENST00000545689 MARCH1Q8TCQ1 289 aa11.28□□□□□ -0.6
COL4A6-209ENST00000545689 GABRG3Q99928 467 aa11.28□□□□□ -0.6
COL4A6-209ENST00000545689 CD160O95971 181 aa11.28□□□□□ -0.6
COL4A6-209ENST00000545689 ZNF117Q03924 483 aa11.28□□□□□ -0.6
COL4A6-209ENST00000545689 CLN3Q13286 438 aa11.28□□□□□ -0.6
COL4A6-209ENST00000545689 CDONQ4KMG0 1287 aa11.28□□□□□ -0.6
COL4A6-209ENST00000545689 ST8SIA4Q92187 359 aa11.28□□□□□ -0.6
COL4A6-209ENST00000545689 TAAR6Q96RI8 345 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms