RNA–Protein interactions for RNA: ENST00000534663.1

RAG1-203, Transcript of recombination activating 1, humanhuman

TSL 1 (best)

Gene RAG1, Length 3,707 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-203ENST00000534663 CALCRP30988 508 aa6.11□□□□□ -1.43
RAG1-203ENST00000534663 PPICP45877 212 aa6.11□□□□□ -1.43
RAG1-203ENST00000534663 HSD17B7P56937 341 aa6.11□□□□□ -1.43
RAG1-203ENST00000534663 OR2B8PP59922 312 aa6.11□□□□□ -1.43
RAG1-203ENST00000534663 IKZF1Q13422 519 aa6.11□□□□□ -1.43
RAG1-203ENST00000534663 RSPO4Q2I0M5 234 aaPredicted RBP6.11□□□□□ -1.43
RAG1-203ENST00000534663 EMC4Q5J8M3 183 aa6.11□□□□□ -1.43
RAG1-203ENST00000534663 PABPC1L2AQ5JQF8 200 aa6.11□□□□□ -1.43
RAG1-203ENST00000534663 RPL7L1Q6DKI1 246 aaKnown RBP6.11□□□□□ -1.43
RAG1-203ENST00000534663 RTL10Q7L3V2 364 aa6.11□□□□□ -1.43
RAG1-203ENST00000534663 EXD3Q8N9H8 876 aa6.11□□□□□ -1.43
RAG1-203ENST00000534663 RXFP4Q8TDU9 374 aa6.11□□□□□ -1.43
RAG1-203ENST00000534663 PTPMT1Q8WUK0 201 aaPredicted RBP6.11□□□□□ -1.43
RAG1-203ENST00000534663 ZNF775Q96BV0 537 aaPredicted RBP6.11□□□□□ -1.43
RAG1-203ENST00000534663 RRNAD1Q96FB5 475 aaKnown RBP6.11□□□□□ -1.43
RAG1-203ENST00000534663 PIK3IP1Q96FE7 263 aa6.11□□□□□ -1.43
RAG1-203ENST00000534663 CFHR5Q9BXR6 569 aa6.11□□□□□ -1.43
RAG1-203ENST00000534663 UQCC1Q9NVA1 299 aa6.11□□□□□ -1.43
RAG1-203ENST00000534663 RPH3AQ9Y2J0 694 aaPredicted RBP6.11□□□□□ -1.43
RAG1-203ENST00000534663 MRPS28Q9Y2Q9 187 aaKnown RBP6.11□□□□□ -1.43
RAG1-203ENST00000534663 ESPL1Q14674 2120 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 IGKV1D-43A0A0B4J1Z2 117 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 CCDC163A0A0D9SF12 145 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 OR5K4A6NMS3 321 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 RHPN2P1A8MT19 583 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 NSA2O95478 260 aaKnown RBP6.1□□□□□ -1.43
RAG1-203ENST00000534663 IL33O95760 270 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 ADCYAP1P18509 176 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 GABRR1P24046 479 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 RBMXP38159 391 aaKnown RBP6.1□□□□□ -1.43
RAG1-203ENST00000534663 GUCA1AP43080 201 aaPredicted RBP6.1□□□□□ -1.43
RAG1-203ENST00000534663 SLC37A1P57057 533 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 FXYD4P59646 89 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 FUT7Q11130 342 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 SGCBQ16585 318 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 ISXQ2M1V0 245 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 CHRFAM7AQ494W8 412 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 ADAM5Q6NVV9 412 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 DNM1P34Q6PK57 102 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 LANCL3Q6ZV70 420 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 SLC25A42Q86VD7 318 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 CATSPERDQ86XM0 798 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 BATF2Q8N1L9 274 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 SLC22A24Q8N4F4 322 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 ZSCAN4Q8NAM6 433 aaPredicted RBP6.1□□□□□ -1.43
RAG1-203ENST00000534663 OR1M1Q8NGA1 313 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 MITD1Q8WV92 249 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 SLAMF6Q96DU3 332 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 CDC6Q99741 560 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 TMEM59Q9BXS4 323 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 ALX4Q9H161 411 aaPredicted RBP6.1□□□□□ -1.43
RAG1-203ENST00000534663 NIT2Q9NQR4 276 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 CUTCQ9NTM9 273 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 SUSD2Q9UGT4 822 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 PCOLCE2Q9UKZ9 415 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 SPTBN5Q9NRC6 3674 aaKnown RBP6.1□□□□□ -1.43
RAG1-203ENST00000534663 PRR19A6NJB7 356 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 A8MVM7 634 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 EFSO43281 561 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 NME2P1O60361 137 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 MTRF1O75570 445 aaKnown RBP6.1□□□□□ -1.43
RAG1-203ENST00000534663 SFTA3P0C7M3 94 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 ZNF735P0CB33 412 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 BCKDHBP21953 392 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 RABIFP47224 123 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 OR3A4PP47883 348 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 SLC6A8P48029 635 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 CLRN1P58418 232 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 GPR85P60893 370 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 RAB5BP61020 215 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.1□□□□□ -1.43
RAG1-203ENST00000534663 FAM57BQ71RH2 274 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 ARHGAP5-AS1Q96IT6 56 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 SLC46A1Q96NT5 459 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 NECAB3Q96P71 396 aaPredicted RBP6.1□□□□□ -1.43
RAG1-203ENST00000534663 MESP1Q9BRJ9 268 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 RSRP1Q9BUV0 290 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 S1PR5Q9H228 398 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 TAF9BQ9HBM6 251 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 ZFP57Q9NU63 452 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 CFAP54Q96N23 3096 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 TRAV20A0A0B4J274 112 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 BGLAPP02818 100 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 MUC1P15941 1255 aaPredicted RBP6.1□□□□□ -1.43
RAG1-203ENST00000534663 ASCL1P50553 236 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 MECP2P51608 486 aaKnown RBP6.1□□□□□ -1.43
RAG1-203ENST00000534663 POLR2HP52434 150 aaKnown RBP6.1□□□□□ -1.43
RAG1-203ENST00000534663 DMWDQ09019 674 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 MICBQ29980 383 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 IAH1Q2TAA2 248 aaPredicted RBP6.1□□□□□ -1.43
RAG1-203ENST00000534663 CLEC18BQ6UXF7 455 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 TERB2Q8NHR7 220 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 CHRDQ9H2X0 955 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 ESRP2Q9H6T0 727 aaKnown RBP6.1□□□□□ -1.43
RAG1-203ENST00000534663 ASH2LQ9UBL3 628 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 SHANK1Q9Y566 2161 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 DOCK7Q96N67 2140 aa6.1□□□□□ -1.43
RAG1-203ENST00000534663 A0A1W2PNR3 127 aa6.09□□□□□ -1.43
RAG1-203ENST00000534663 C1orf196B1AJZ1 125 aa6.09□□□□□ -1.43
RAG1-203ENST00000534663 PRSS44E7EML9 344 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms