RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 TMEM184BQ9Y519 407 aaPredicted RBP11.16□□□□□ -0.62
CAPN1-208ENST00000527323 NUDT21O43809 227 aaKnown RBP11.16□□□□□ -0.62
CAPN1-208ENST00000527323 HOXA1P49639 335 aaPredicted RBP11.16□□□□□ -0.62
CAPN1-208ENST00000527323 NR0B1P51843 470 aaKnown RBP11.16□□□□□ -0.62
CAPN1-208ENST00000527323 SLC37A1P57057 533 aa11.16□□□□□ -0.62
CAPN1-208ENST00000527323 SGCBQ16585 318 aa11.16□□□□□ -0.62
CAPN1-208ENST00000527323 ARHGEF39Q8N4T4 335 aa11.16□□□□□ -0.62
CAPN1-208ENST00000527323 KCNK7Q9Y2U2 307 aa11.16□□□□□ -0.62
CAPN1-208ENST00000527323 A0A1W2PR77 199 aa11.15□□□□□ -0.62
CAPN1-208ENST00000527323 RAB27BO00194 218 aa11.15□□□□□ -0.62
CAPN1-208ENST00000527323 LDLRAD4O15165 306 aa11.15□□□□□ -0.62
CAPN1-208ENST00000527323 EFSO43281 561 aa11.15□□□□□ -0.62
CAPN1-208ENST00000527323 CLPSP04118 112 aa11.15□□□□□ -0.62
CAPN1-208ENST00000527323 CRHP06850 196 aa11.15□□□□□ -0.62
CAPN1-208ENST00000527323 H2BFMP0C1H6 154 aa11.15□□□□□ -0.62
CAPN1-208ENST00000527323 ADCYAP1P18509 176 aa11.15□□□□□ -0.62
CAPN1-208ENST00000527323 FSTP19883 344 aa11.15□□□□□ -0.62
CAPN1-208ENST00000527323 PGCP20142 388 aa11.15□□□□□ -0.62
CAPN1-208ENST00000527323 RAB13P51153 203 aa11.15□□□□□ -0.62
CAPN1-208ENST00000527323 HFEQ30201 348 aa11.15□□□□□ -0.62
CAPN1-208ENST00000527323 AKIRIN2Q53H80 203 aa11.15□□□□□ -0.62
CAPN1-208ENST00000527323 ZNF704Q6ZNC4 412 aaPredicted RBP11.15□□□□□ -0.62
CAPN1-208ENST00000527323 ADAMTS18Q8TE60 1221 aa11.15□□□□□ -0.62
CAPN1-208ENST00000527323 PTPMT1Q8WUK0 201 aaPredicted RBP11.15□□□□□ -0.62
CAPN1-208ENST00000527323 AQP3Q92482 292 aa11.15□□□□□ -0.62
CAPN1-208ENST00000527323 SLC46A1Q96NT5 459 aa11.15□□□□□ -0.62
CAPN1-208ENST00000527323 HRH4Q9H3N8 390 aa11.15□□□□□ -0.62
CAPN1-208ENST00000527323 HS3ST3A1Q9Y663 406 aa11.15□□□□□ -0.62
CAPN1-208ENST00000527323 MGAQ8IWI9 3026 aa11.15□□□□□ -0.62
CAPN1-208ENST00000527323 TMED7-TICAM2A0A0A6YYA0 188 aa11.15□□□□□ -0.62
CAPN1-208ENST00000527323 BLACEA4D250 179 aa11.15□□□□□ -0.62
CAPN1-208ENST00000527323 FARS2O95363 451 aaKnown RBP11.15□□□□□ -0.62
CAPN1-208ENST00000527323 HLA-GP17693 338 aa11.15□□□□□ -0.62
CAPN1-208ENST00000527323 CRABP1P29762 137 aa11.15□□□□□ -0.62
CAPN1-208ENST00000527323 TMEM244Q5VVB8 128 aa11.15□□□□□ -0.62
CAPN1-208ENST00000527323 ZNF585AQ6P3V2 769 aa11.15□□□□□ -0.62
CAPN1-208ENST00000527323 ZNF101Q8IZC7 436 aa11.15□□□□□ -0.62
CAPN1-208ENST00000527323 ZFP82Q8N141 532 aa11.15□□□□□ -0.62
CAPN1-208ENST00000527323 OR52N4Q8NGI2 321 aa11.15□□□□□ -0.62
CAPN1-208ENST00000527323 C2CD4CQ8TF44 421 aa11.15□□□□□ -0.62
CAPN1-208ENST00000527323 BIN3Q9NQY0 253 aa11.15□□□□□ -0.62
CAPN1-208ENST00000527323 SDK2Q58EX2 2172 aa11.15□□□□□ -0.62
CAPN1-208ENST00000527323 LOC101059948A0A1B0GTJ6 334 aa11.15□□□□□ -0.63
CAPN1-208ENST00000527323 TMEM150CB9EJG8 249 aa11.15□□□□□ -0.63
CAPN1-208ENST00000527323 SNAPINO95295 136 aa11.15□□□□□ -0.63
CAPN1-208ENST00000527323 DUS4LO95620 317 aaKnown RBP11.15□□□□□ -0.63
CAPN1-208ENST00000527323 IL2RAP01589 272 aa11.15□□□□□ -0.63
CAPN1-208ENST00000527323 FREM3P0C091 2139 aa11.15□□□□□ -0.63
CAPN1-208ENST00000527323 CD1CP29017 333 aa11.15□□□□□ -0.63
CAPN1-208ENST00000527323 SLC9A3R2Q15599 337 aa11.15□□□□□ -0.63
CAPN1-208ENST00000527323 C21orf62-AS1Q17RA5 79 aa11.15□□□□□ -0.63
CAPN1-208ENST00000527323 C1orf100Q5SVJ3 147 aa11.15□□□□□ -0.63
CAPN1-208ENST00000527323 FAM69BQ5VUD6 431 aa11.15□□□□□ -0.63
CAPN1-208ENST00000527323 ZNF813Q6ZN06 617 aa11.15□□□□□ -0.63
CAPN1-208ENST00000527323 COX15Q7KZN9 410 aa11.15□□□□□ -0.63
CAPN1-208ENST00000527323 MAML2Q8IZL2 1156 aaPredicted RBP11.15□□□□□ -0.63
CAPN1-208ENST00000527323 ZNF519Q8TB69 540 aa11.15□□□□□ -0.63
CAPN1-208ENST00000527323 TSLPQ969D9 159 aa11.15□□□□□ -0.63
CAPN1-208ENST00000527323 SLC7A5P2Q9GIP4 190 aa11.15□□□□□ -0.63
CAPN1-208ENST00000527323 SLC2A8Q9NY64 477 aa11.15□□□□□ -0.63
CAPN1-208ENST00000527323 OTOGLQ3ZCN5 2332 aa11.14□□□□□ -0.63
CAPN1-208ENST00000527323 AHSA1O95433 338 aa11.14□□□□□ -0.63
CAPN1-208ENST00000527323 MT-ATP6P00846 226 aa11.14□□□□□ -0.63
CAPN1-208ENST00000527323 HLA-DOBP13765 273 aa11.14□□□□□ -0.63
CAPN1-208ENST00000527323 OR1D4P47884 311 aa11.14□□□□□ -0.63
CAPN1-208ENST00000527323 CCR5P51681 352 aa11.14□□□□□ -0.63
CAPN1-208ENST00000527323 FMODQ06828 376 aa11.14□□□□□ -0.63
CAPN1-208ENST00000527323 PHF19Q5T6S3 580 aa11.14□□□□□ -0.63
CAPN1-208ENST00000527323 C1orf140Q5VVS0 124 aa11.14□□□□□ -0.63
CAPN1-208ENST00000527323 NKAIN3Q8N8D7 197 aa11.14□□□□□ -0.63
CAPN1-208ENST00000527323 OR4K15Q8NH41 348 aa11.14□□□□□ -0.63
CAPN1-208ENST00000527323 STOML3Q8TAV4 291 aa11.14□□□□□ -0.63
CAPN1-208ENST00000527323 MRGPRFQ96AM1 343 aa11.14□□□□□ -0.63
CAPN1-208ENST00000527323 ARID1AO14497 2285 aa11.14□□□□□ -0.63
CAPN1-208ENST00000527323 WIPF3A6NGB9 483 aa11.14□□□□□ -0.63
CAPN1-208ENST00000527323 C19orf67A6NJJ6 358 aa11.14□□□□□ -0.63
CAPN1-208ENST00000527323 NPBWR1P48145 328 aa11.14□□□□□ -0.63
CAPN1-208ENST00000527323 SHISA6Q6ZSJ9 500 aa11.14□□□□□ -0.63
CAPN1-208ENST00000527323 TMPPEQ6ZT21 453 aa11.14□□□□□ -0.63
CAPN1-208ENST00000527323 ROBO4Q8WZ75 1007 aa11.14□□□□□ -0.63
CAPN1-208ENST00000527323 MED12Q93074 2177 aa11.14□□□□□ -0.63
CAPN1-208ENST00000527323 CLDN23Q96B33 292 aa11.14□□□□□ -0.63
CAPN1-208ENST00000527323 PTGES2Q9H7Z7 377 aa11.14□□□□□ -0.63
CAPN1-208ENST00000527323 G6PC2Q9NQR9 355 aa11.14□□□□□ -0.63
CAPN1-208ENST00000527323 PRR13Q9NZ81 148 aa11.14□□□□□ -0.63
CAPN1-208ENST00000527323 VSX1Q9NZR4 365 aaPredicted RBP11.14□□□□□ -0.63
CAPN1-208ENST00000527323 FAM96BQ9Y3D0 163 aa11.14□□□□□ -0.63
CAPN1-208ENST00000527323 FAM186AA6NE01 2351 aa11.14□□□□□ -0.63
CAPN1-208ENST00000527323 FGF16O43320 207 aa11.13□□□□□ -0.63
CAPN1-208ENST00000527323 RAB6AP20340 208 aa11.13□□□□□ -0.63
CAPN1-208ENST00000527323 NPY4RP50391 375 aa11.13□□□□□ -0.63
CAPN1-208ENST00000527323 CYCSP99999 105 aaKnown RBP11.13□□□□□ -0.63
CAPN1-208ENST00000527323 PDZK1IP1Q13113 114 aa11.13□□□□□ -0.63
CAPN1-208ENST00000527323 FAM219AQ8IW50 185 aa11.13□□□□□ -0.63
CAPN1-208ENST00000527323 OR13C9Q8NGT0 318 aa11.13□□□□□ -0.63
CAPN1-208ENST00000527323 PTX4Q96A99 478 aa11.13□□□□□ -0.63
CAPN1-208ENST00000527323 TCTN2Q96GX1 697 aa11.13□□□□□ -0.63
CAPN1-208ENST00000527323 TMEM41AQ96HV5 264 aa11.13□□□□□ -0.63
CAPN1-208ENST00000527323 SPACA5Q96QH8 159 aa11.13□□□□□ -0.63
CAPN1-208ENST00000527323 CMSS1Q9BQ75 279 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms