RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 ZNF181Q2M3W8 571 aa13.14□□□□□ -0.31
TRAPPC9-205ENST00000518839 TBRG1Q3YBR2 411 aa13.14□□□□□ -0.31
TRAPPC9-205ENST00000518839 FAM131AQ6UXB0 335 aa13.14□□□□□ -0.31
TRAPPC9-205ENST00000518839 OR1J2Q8NGS2 313 aa13.14□□□□□ -0.31
TRAPPC9-205ENST00000518839 FGFBP3Q8TAT2 258 aa13.14□□□□□ -0.31
TRAPPC9-205ENST00000518839 FGGYQ96C11 551 aa13.14□□□□□ -0.31
TRAPPC9-205ENST00000518839 GFI1Q99684 422 aa13.14□□□□□ -0.31
TRAPPC9-205ENST00000518839 ZNF319Q9P2F9 582 aa13.14□□□□□ -0.31
TRAPPC9-205ENST00000518839 CIB4A0PJX0 185 aa13.13□□□□□ -0.31
TRAPPC9-205ENST00000518839 ZNHIT1O43257 154 aa13.13□□□□□ -0.31
TRAPPC9-205ENST00000518839 XRCC2O43543 280 aa13.13□□□□□ -0.31
TRAPPC9-205ENST00000518839 DHRS3O75911 302 aa13.13□□□□□ -0.31
TRAPPC9-205ENST00000518839 HLA-HP01893 362 aa13.13□□□□□ -0.31
TRAPPC9-205ENST00000518839 APOA1P02647 267 aa13.13□□□□□ -0.31
TRAPPC9-205ENST00000518839 LCATP04180 440 aa13.13□□□□□ -0.31
TRAPPC9-205ENST00000518839 CD37P11049 281 aa13.13□□□□□ -0.31
TRAPPC9-205ENST00000518839 COX5AP20674 150 aa13.13□□□□□ -0.31
TRAPPC9-205ENST00000518839 IGHV1-2P23083 117 aa13.13□□□□□ -0.31
TRAPPC9-205ENST00000518839 THBS4P35443 961 aa13.13□□□□□ -0.31
TRAPPC9-205ENST00000518839 UBE2NP61088 152 aaKnown RBP13.13□□□□□ -0.31
TRAPPC9-205ENST00000518839 RAB1AP62820 205 aa13.13□□□□□ -0.31
TRAPPC9-205ENST00000518839 KLRB1Q12918 225 aa13.13□□□□□ -0.31
TRAPPC9-205ENST00000518839 GSG1Q2KHT4 349 aa13.13□□□□□ -0.31
TRAPPC9-205ENST00000518839 HES5Q5TA89 166 aa13.13□□□□□ -0.31
TRAPPC9-205ENST00000518839 RTL6Q6ICC9 239 aa13.13□□□□□ -0.31
TRAPPC9-205ENST00000518839 XKRXQ6PP77 449 aa13.13□□□□□ -0.31
TRAPPC9-205ENST00000518839 GFRALQ6UXV0 394 aa13.13□□□□□ -0.31
TRAPPC9-205ENST00000518839 BAIAP2L2Q6UXY1 529 aa13.13□□□□□ -0.31
TRAPPC9-205ENST00000518839 BEND4Q6ZU67 534 aa13.13□□□□□ -0.31
TRAPPC9-205ENST00000518839 CDH26Q8IXH8 852 aa13.13□□□□□ -0.31
TRAPPC9-205ENST00000518839 SAMD12Q8N8I0 201 aa13.13□□□□□ -0.31
TRAPPC9-205ENST00000518839 OR14K1Q8NGZ2 314 aa13.13□□□□□ -0.31
TRAPPC9-205ENST00000518839 SLC7A6Q92536 515 aa13.13□□□□□ -0.31
TRAPPC9-205ENST00000518839 AKAP1Q92667 903 aaKnown RBP eCLIP13.13□□□□□ -0.31
TRAPPC9-205ENST00000518839 FAM71F1Q96KD3 344 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC9-205ENST00000518839 SFXN3Q9BWM7 321 aa13.13□□□□□ -0.31
TRAPPC9-205ENST00000518839 CYSLTR2Q9NS75 346 aa13.13□□□□□ -0.31
TRAPPC9-205ENST00000518839 STEAP1Q9UHE8 339 aa13.13□□□□□ -0.31
TRAPPC9-205ENST00000518839 FAM215AQ9Y5M1 114 aa13.13□□□□□ -0.31
TRAPPC9-205ENST00000518839 V9GYH0 126 aa13.13□□□□□ -0.31
TRAPPC9-205ENST00000518839 V9GYS6 101 aa13.13□□□□□ -0.31
TRAPPC9-205ENST00000518839 PIEZO1Q92508 2521 aa13.12□□□□□ -0.31
TRAPPC9-205ENST00000518839 SLC17A2O00624 439 aa13.12□□□□□ -0.31
TRAPPC9-205ENST00000518839 UPK1BO75841 260 aa13.12□□□□□ -0.31
TRAPPC9-205ENST00000518839 TNFSF13O75888 250 aa13.12□□□□□ -0.31
TRAPPC9-205ENST00000518839 SERPINA5P05154 406 aa13.12□□□□□ -0.31
TRAPPC9-205ENST00000518839 RAB3AP20336 220 aa13.12□□□□□ -0.31
TRAPPC9-205ENST00000518839 BDKRB2P30411 391 aa13.12□□□□□ -0.31
TRAPPC9-205ENST00000518839 HOXC12P31275 282 aa13.12□□□□□ -0.31
TRAPPC9-205ENST00000518839 APLNRP35414 380 aa13.12□□□□□ -0.31
TRAPPC9-205ENST00000518839 P2RY6Q15077 328 aa13.12□□□□□ -0.31
TRAPPC9-205ENST00000518839 GFOD2Q3B7J2 385 aa13.12□□□□□ -0.31
TRAPPC9-205ENST00000518839 UBE2NLQ5JXB2 153 aa13.12□□□□□ -0.31
TRAPPC9-205ENST00000518839 SFRP5Q5T4F7 317 aa13.12□□□□□ -0.31
TRAPPC9-205ENST00000518839 VWA1Q6PCB0 445 aa13.12□□□□□ -0.31
TRAPPC9-205ENST00000518839 CNIH2Q6PI25 160 aa13.12□□□□□ -0.31
TRAPPC9-205ENST00000518839 SEM1Q6ZVN7 128 aa13.12□□□□□ -0.31
TRAPPC9-205ENST00000518839 BTLAQ7Z6A9 289 aa13.12□□□□□ -0.31
TRAPPC9-205ENST00000518839 NAA40Q86UY6 237 aa13.12□□□□□ -0.31
TRAPPC9-205ENST00000518839 C17orf78Q8N4C9 275 aa13.12□□□□□ -0.31
TRAPPC9-205ENST00000518839 GDPD1Q8N9F7 314 aa13.12□□□□□ -0.31
TRAPPC9-205ENST00000518839 OR1M1Q8NGA1 313 aa13.12□□□□□ -0.31
TRAPPC9-205ENST00000518839 OR6M1Q8NGM8 313 aa13.12□□□□□ -0.31
TRAPPC9-205ENST00000518839 PP6455Q8WZ26 134 aa13.12□□□□□ -0.31
TRAPPC9-205ENST00000518839 SNRNP40Q96DI7 357 aaKnown RBP13.12□□□□□ -0.31
TRAPPC9-205ENST00000518839 STARD4Q96DR4 205 aa13.12□□□□□ -0.31
TRAPPC9-205ENST00000518839 C1QTNF5Q9BXJ0 243 aa13.12□□□□□ -0.31
TRAPPC9-205ENST00000518839 NEK6Q9HC98 313 aa13.12□□□□□ -0.31
TRAPPC9-205ENST00000518839 OBP2BQ9NPH6 170 aa13.12□□□□□ -0.31
TRAPPC9-205ENST00000518839 TMEM138Q9NPI0 162 aa13.12□□□□□ -0.31
TRAPPC9-205ENST00000518839 B3GNT2Q9NY97 397 aa13.12□□□□□ -0.31
TRAPPC9-205ENST00000518839 SVILO95425 2214 aa13.11□□□□□ -0.31
TRAPPC9-205ENST00000518839 ISPDA4D126 451 aa13.11□□□□□ -0.31
TRAPPC9-205ENST00000518839 SULT1B1O43704 296 aa13.11□□□□□ -0.31
TRAPPC9-205ENST00000518839 ALX3O95076 343 aa13.11□□□□□ -0.31
TRAPPC9-205ENST00000518839 CGAP01215 116 aa13.11□□□□□ -0.31
TRAPPC9-205ENST00000518839 SNRPBP14678 240 aaKnown RBP13.11□□□□□ -0.31
TRAPPC9-205ENST00000518839 ELK1P19419 428 aa13.11□□□□□ -0.31
TRAPPC9-205ENST00000518839 STOMP27105 288 aa13.11□□□□□ -0.31
TRAPPC9-205ENST00000518839 CEACAM8P31997 349 aaPredicted RBP13.11□□□□□ -0.31
TRAPPC9-205ENST00000518839 FOXF2Q12947 444 aa13.11□□□□□ -0.31
TRAPPC9-205ENST00000518839 RIN1Q13671 783 aa13.11□□□□□ -0.31
TRAPPC9-205ENST00000518839 RAB11BQ15907 218 aa13.11□□□□□ -0.31
TRAPPC9-205ENST00000518839 GABRA6Q16445 453 aa13.11□□□□□ -0.31
TRAPPC9-205ENST00000518839 SNAI3Q3KNW1 292 aa13.11□□□□□ -0.31
TRAPPC9-205ENST00000518839 C1QTNF12Q5T7M4 302 aa13.11□□□□□ -0.31
TRAPPC9-205ENST00000518839 ASPHD2Q6ICH7 369 aa13.11□□□□□ -0.31
TRAPPC9-205ENST00000518839 ZNF529Q6P280 563 aa13.11□□□□□ -0.31
TRAPPC9-205ENST00000518839 COLCA1Q6ZS62 124 aa13.11□□□□□ -0.31
TRAPPC9-205ENST00000518839 GABRG1Q8N1C3 465 aa13.11□□□□□ -0.31
TRAPPC9-205ENST00000518839 CPEB3Q8NE35 698 aaKnown RBP13.11□□□□□ -0.31
TRAPPC9-205ENST00000518839 LGALS14Q8TCE9 139 aa13.11□□□□□ -0.31
TRAPPC9-205ENST00000518839 RAB40AQ8WXH6 277 aa13.11□□□□□ -0.31
TRAPPC9-205ENST00000518839 SGK3Q96BR1 496 aa13.11□□□□□ -0.31
TRAPPC9-205ENST00000518839 ADAT3Q96EY9 351 aaPredicted RBP13.11□□□□□ -0.31
TRAPPC9-205ENST00000518839 REEP6Q96HR9 211 aa13.11□□□□□ -0.31
TRAPPC9-205ENST00000518839 LYZL4Q96KX0 146 aa13.11□□□□□ -0.31
TRAPPC9-205ENST00000518839 SORCS2Q96PQ0 1159 aa13.11□□□□□ -0.31
TRAPPC9-205ENST00000518839 SOSTQ9BQB4 213 aa13.11□□□□□ -0.31
TRAPPC9-205ENST00000518839 SRRQ9GZT4 340 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms