RNA–Protein interactions for RNA: ENST00000511773.5

POLR2J3-216, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-216ENST00000511773 COQ7Q99807 217 aa10.83□□□□□ -0.68
POLR2J3-216ENST00000511773 HDHD2Q9H0R4 259 aa10.83□□□□□ -0.68
POLR2J3-216ENST00000511773 RHCGQ9UBD6 479 aa10.83□□□□□ -0.68
POLR2J3-216ENST00000511773 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.83□□□□□ -0.68
POLR2J3-216ENST00000511773 V9GYY5 206 aaPredicted RBP10.83□□□□□ -0.68
POLR2J3-216ENST00000511773 F5H5K5 113 aa10.82□□□□□ -0.68
POLR2J3-216ENST00000511773 GRPP07492 148 aa10.82□□□□□ -0.68
POLR2J3-216ENST00000511773 CD14P08571 375 aa10.82□□□□□ -0.68
POLR2J3-216ENST00000511773 YAP1P46937 504 aaKnown RBP10.82□□□□□ -0.68
POLR2J3-216ENST00000511773 GZMMP51124 257 aa10.82□□□□□ -0.68
POLR2J3-216ENST00000511773 ST3GAL3Q11203 375 aa10.82□□□□□ -0.68
POLR2J3-216ENST00000511773 MALLQ13021 153 aa10.82□□□□□ -0.68
POLR2J3-216ENST00000511773 C11orf88Q6PI97 169 aa10.82□□□□□ -0.68
POLR2J3-216ENST00000511773 PGAP1Q75T13 922 aa10.82□□□□□ -0.68
POLR2J3-216ENST00000511773 MRPL21Q7Z2W9 205 aaKnown RBP10.82□□□□□ -0.68
POLR2J3-216ENST00000511773 CALHM3Q86XJ0 350 aa10.82□□□□□ -0.68
POLR2J3-216ENST00000511773 CMTM4Q8IZR5 234 aa10.82□□□□□ -0.68
POLR2J3-216ENST00000511773 GJC3Q8NFK1 279 aa10.82□□□□□ -0.68
POLR2J3-216ENST00000511773 TPD52L3Q96J77 140 aa10.82□□□□□ -0.68
POLR2J3-216ENST00000511773 CLPTM1LQ96KA5 538 aa10.82□□□□□ -0.68
POLR2J3-216ENST00000511773 CCL13Q99616 98 aa10.82□□□□□ -0.68
POLR2J3-216ENST00000511773 CCDC28BQ9BUN5 200 aa10.82□□□□□ -0.68
POLR2J3-216ENST00000511773 A4GNTQ9UNA3 340 aa10.82□□□□□ -0.68
POLR2J3-216ENST00000511773 NDUFAF1Q9Y375 327 aa10.82□□□□□ -0.68
POLR2J3-216ENST00000511773 LHFPL6Q9Y693 200 aa10.82□□□□□ -0.68
POLR2J3-216ENST00000511773 SOCS2O14508 198 aa10.81□□□□□ -0.68
POLR2J3-216ENST00000511773 AHCYL1O43865 530 aa10.81□□□□□ -0.68
POLR2J3-216ENST00000511773 LCATP04180 440 aa10.81□□□□□ -0.68
POLR2J3-216ENST00000511773 ACSM4P0C7M7 580 aa10.81□□□□□ -0.68
POLR2J3-216ENST00000511773 ZNF26P17031 533 aaPredicted RBP10.81□□□□□ -0.68
POLR2J3-216ENST00000511773 KIR2DS4P43632 304 aa10.81□□□□□ -0.68
POLR2J3-216ENST00000511773 IKZF1Q13422 519 aa10.81□□□□□ -0.68
POLR2J3-216ENST00000511773 RSPO1Q2MKA7 263 aaPredicted RBP10.81□□□□□ -0.68
POLR2J3-216ENST00000511773 LRRC23Q53EV4 343 aaPredicted RBP10.81□□□□□ -0.68
POLR2J3-216ENST00000511773 METAP1DQ6UB28 335 aaPredicted RBP10.81□□□□□ -0.68
POLR2J3-216ENST00000511773 CFAP77Q6ZQR2 320 aa10.81□□□□□ -0.68
POLR2J3-216ENST00000511773 FAM122BQ7Z309 247 aa10.81□□□□□ -0.68
POLR2J3-216ENST00000511773 NAA40Q86UY6 237 aa10.81□□□□□ -0.68
POLR2J3-216ENST00000511773 LNX2Q8N448 690 aa10.81□□□□□ -0.68
POLR2J3-216ENST00000511773 DPP10Q8N608 796 aa10.81□□□□□ -0.68
POLR2J3-216ENST00000511773 GCSAMQ8N6F7 178 aa10.81□□□□□ -0.68
POLR2J3-216ENST00000511773 FAM216BQ8N7L0 139 aa10.81□□□□□ -0.68
POLR2J3-216ENST00000511773 C17orf50Q8WW18 174 aa10.81□□□□□ -0.68
POLR2J3-216ENST00000511773 PRRC1Q96M27 445 aa10.81□□□□□ -0.68
POLR2J3-216ENST00000511773 NUAK2Q9H093 628 aa10.81□□□□□ -0.68
POLR2J3-216ENST00000511773 LOC100653049A0A140TA62 436 aa10.8□□□□□ -0.68
POLR2J3-216ENST00000511773 HTR3EA5X5Y0 456 aa10.8□□□□□ -0.68
POLR2J3-216ENST00000511773 CD300LBA8K4G0 201 aa10.8□□□□□ -0.68
POLR2J3-216ENST00000511773 K7EIL1 84 aa10.8□□□□□ -0.68
POLR2J3-216ENST00000511773 CDC42EP2O14613 210 aa10.8□□□□□ -0.68
POLR2J3-216ENST00000511773 FBXO24O75426 580 aa10.8□□□□□ -0.68
POLR2J3-216ENST00000511773 KRT34O76011 436 aa10.8□□□□□ -0.68
POLR2J3-216ENST00000511773 CD28P10747 220 aa10.8□□□□□ -0.68
POLR2J3-216ENST00000511773 MAGOHP61326 146 aaKnown RBP10.8□□□□□ -0.68
POLR2J3-216ENST00000511773 PRKCDQ05655 676 aa10.8□□□□□ -0.68
POLR2J3-216ENST00000511773 ANKDD1AQ495B1 522 aa10.8□□□□□ -0.68
POLR2J3-216ENST00000511773 WDR38Q5JTN6 314 aa10.8□□□□□ -0.68
POLR2J3-216ENST00000511773 WDR93Q6P2C0 686 aa10.8□□□□□ -0.68
POLR2J3-216ENST00000511773 ZNF730Q6ZMV8 503 aa10.8□□□□□ -0.68
POLR2J3-216ENST00000511773 COLCA1Q6ZS62 124 aa10.8□□□□□ -0.68
POLR2J3-216ENST00000511773 LINC00346Q8IVM7 164 aa10.8□□□□□ -0.68
POLR2J3-216ENST00000511773 Q8N7P7 452 aa10.8□□□□□ -0.68
POLR2J3-216ENST00000511773 LY6G5BQ8NDX9 201 aa10.8□□□□□ -0.68
POLR2J3-216ENST00000511773 H1FXQ92522 213 aaKnown RBP10.8□□□□□ -0.68
POLR2J3-216ENST00000511773 RORBQ92753 470 aa10.8□□□□□ -0.68
POLR2J3-216ENST00000511773 TSSK2Q96PF2 358 aa10.8□□□□□ -0.68
POLR2J3-216ENST00000511773 PITX2Q99697 317 aa10.8□□□□□ -0.68
POLR2J3-216ENST00000511773 SSX3Q99909 188 aa10.8□□□□□ -0.68
POLR2J3-216ENST00000511773 FNDC11Q9BVV2 318 aa10.8□□□□□ -0.68
POLR2J3-216ENST00000511773 RABEP2Q9H5N1 569 aa10.8□□□□□ -0.68
POLR2J3-216ENST00000511773 NMNAT1Q9HAN9 279 aaPredicted RBP10.8□□□□□ -0.68
POLR2J3-216ENST00000511773 AURKCQ9UQB9 309 aa10.8□□□□□ -0.68
POLR2J3-216ENST00000511773 NOP16Q9Y3C1 178 aaKnown RBP10.8□□□□□ -0.68
POLR2J3-216ENST00000511773 DNAH9Q9NYC9 4486 aa10.79□□□□□ -0.68
POLR2J3-216ENST00000511773 GMDSO60547 372 aa10.79□□□□□ -0.68
POLR2J3-216ENST00000511773 PTBP3O95758 552 aaKnown RBP10.79□□□□□ -0.68
POLR2J3-216ENST00000511773 IGLL1P15814 213 aa10.79□□□□□ -0.68
POLR2J3-216ENST00000511773 IFNA8P32881 189 aa10.79□□□□□ -0.68
POLR2J3-216ENST00000511773 GGT2P36268 569 aa10.79□□□□□ -0.68
POLR2J3-216ENST00000511773 HIST1H3AP68431 136 aa10.79□□□□□ -0.68
POLR2J3-216ENST00000511773 TRAP1Q12931 704 aaKnown RBP10.79□□□□□ -0.68
POLR2J3-216ENST00000511773 ECH1Q13011 328 aa10.79□□□□□ -0.68
POLR2J3-216ENST00000511773 KCNMB1Q16558 191 aa10.79□□□□□ -0.68
POLR2J3-216ENST00000511773 C11orf91Q3C1V1 193 aa10.79□□□□□ -0.68
POLR2J3-216ENST00000511773 KRTAP27-1Q3LI81 207 aa10.79□□□□□ -0.68
POLR2J3-216ENST00000511773 ZBED5Q49AG3 693 aa10.79□□□□□ -0.68
POLR2J3-216ENST00000511773 CYBRD1Q53TN4 286 aa10.79□□□□□ -0.68
POLR2J3-216ENST00000511773 RABL3Q5HYI8 236 aa10.79□□□□□ -0.68
POLR2J3-216ENST00000511773 DEFB121Q5J5C9 76 aa10.79□□□□□ -0.68
POLR2J3-216ENST00000511773 HIST2H3PS2Q5TEC6 136 aa10.79□□□□□ -0.68
POLR2J3-216ENST00000511773 TEX36Q5VZQ5 186 aa10.79□□□□□ -0.68
POLR2J3-216ENST00000511773 TBPL2Q6SJ96 375 aa10.79□□□□□ -0.68
POLR2J3-216ENST00000511773 PTCHD4Q6ZW05 846 aa10.79□□□□□ -0.68
POLR2J3-216ENST00000511773 HIST2H3AQ71DI3 136 aa10.79□□□□□ -0.68
POLR2J3-216ENST00000511773 BEND2Q8NDZ0 799 aa10.79□□□□□ -0.68
POLR2J3-216ENST00000511773 OR4F17Q8NGA8 305 aa10.79□□□□□ -0.68
POLR2J3-216ENST00000511773 OR51G2Q8NGK0 314 aa10.79□□□□□ -0.68
POLR2J3-216ENST00000511773 OR2AE1Q8NHA4 323 aa10.79□□□□□ -0.68
POLR2J3-216ENST00000511773 ACOT11Q8WXI4 607 aaPredicted RBP10.79□□□□□ -0.68
POLR2J3-216ENST00000511773 LZICQ8WZA0 190 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms