RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 COLCA1Q6ZS62 124 aa12.88□□□□□ -0.35
PDLIM7-210ENST00000503827 PGAP1Q75T13 922 aa12.88□□□□□ -0.35
PDLIM7-210ENST00000503827 MAVSQ7Z434 540 aa12.88□□□□□ -0.35
PDLIM7-210ENST00000503827 GJC3Q8NFK1 279 aa12.88□□□□□ -0.35
PDLIM7-210ENST00000503827 OR51A7Q8NH64 312 aa12.88□□□□□ -0.35
PDLIM7-210ENST00000503827 TNFRSF14Q92956 283 aa12.88□□□□□ -0.35
PDLIM7-210ENST00000503827 SLCO4A1Q96BD0 722 aa12.88□□□□□ -0.35
PDLIM7-210ENST00000503827 ADAT1Q9BUB4 502 aaKnown RBP12.88□□□□□ -0.35
PDLIM7-210ENST00000503827 TMEM109Q9BVC6 243 aa12.88□□□□□ -0.35
PDLIM7-210ENST00000503827 SERTAD4Q9NUC0 356 aa12.88□□□□□ -0.35
PDLIM7-210ENST00000503827 BIRC6Q9NR09 4857 aa12.87□□□□□ -0.35
PDLIM7-210ENST00000503827 TRAV27A0A087WT01 109 aa12.87□□□□□ -0.35
PDLIM7-210ENST00000503827 NDUFB3O43676 98 aa12.87□□□□□ -0.35
PDLIM7-210ENST00000503827 PEX14O75381 377 aa12.87□□□□□ -0.35
PDLIM7-210ENST00000503827 DUS4LO95620 317 aaKnown RBP12.87□□□□□ -0.35
PDLIM7-210ENST00000503827 GRPP07492 148 aa12.87□□□□□ -0.35
PDLIM7-210ENST00000503827 CTLA4P16410 223 aa12.87□□□□□ -0.35
PDLIM7-210ENST00000503827 ECH1Q13011 328 aa12.87□□□□□ -0.35
PDLIM7-210ENST00000503827 DCTN2Q13561 401 aaKnown RBP12.87□□□□□ -0.35
PDLIM7-210ENST00000503827 AANATQ16613 207 aa12.87□□□□□ -0.35
PDLIM7-210ENST00000503827 KRT71Q3SY84 523 aa12.87□□□□□ -0.35
PDLIM7-210ENST00000503827 ANKDD1AQ495B1 522 aa12.87□□□□□ -0.35
PDLIM7-210ENST00000503827 KLHL22Q53GT1 634 aa12.87□□□□□ -0.35
PDLIM7-210ENST00000503827 ZNF826PQ6ZT77 177 aa12.87□□□□□ -0.35
PDLIM7-210ENST00000503827 SLC36A1Q7Z2H8 476 aa12.87□□□□□ -0.35
PDLIM7-210ENST00000503827 GLB1L2Q8IW92 636 aa12.87□□□□□ -0.35
PDLIM7-210ENST00000503827 MICU2Q8IYU8 434 aa12.87□□□□□ -0.35
PDLIM7-210ENST00000503827 ACOT11Q8WXI4 607 aaPredicted RBP12.87□□□□□ -0.35
PDLIM7-210ENST00000503827 RORBQ92753 470 aa12.87□□□□□ -0.35
PDLIM7-210ENST00000503827 RCC1LQ96I51 464 aaKnown RBP12.87□□□□□ -0.35
PDLIM7-210ENST00000503827 CCL13Q99616 98 aa12.87□□□□□ -0.35
PDLIM7-210ENST00000503827 DCTN5Q9BTE1 182 aa12.87□□□□□ -0.35
PDLIM7-210ENST00000503827 MEGF9Q9H1U4 602 aa12.87□□□□□ -0.35
PDLIM7-210ENST00000503827 RERGLQ9H628 205 aa12.87□□□□□ -0.35
PDLIM7-210ENST00000503827 PRPF19Q9UMS4 504 aaKnown RBP12.87□□□□□ -0.35
PDLIM7-210ENST00000503827 COA3Q9Y2R0 106 aaPredicted RBP12.87□□□□□ -0.35
PDLIM7-210ENST00000503827 A0A1B0GW55 424 aa12.86□□□□□ -0.35
PDLIM7-210ENST00000503827 PRSS37A4D1T9 235 aa12.86□□□□□ -0.35
PDLIM7-210ENST00000503827 SLC16A7O60669 478 aa12.86□□□□□ -0.35
PDLIM7-210ENST00000503827 KHDRBS3O75525 346 aaKnown RBP12.86□□□□□ -0.35
PDLIM7-210ENST00000503827 LHBP01229 141 aa12.86□□□□□ -0.35
PDLIM7-210ENST00000503827 DUX4L2P0CJ85 424 aa12.86□□□□□ -0.35
PDLIM7-210ENST00000503827 DUX4L3P0CJ86 424 aa12.86□□□□□ -0.35
PDLIM7-210ENST00000503827 DUX4L4P0CJ87 422 aa12.86□□□□□ -0.35
PDLIM7-210ENST00000503827 DUX4L5P0CJ88 424 aa12.86□□□□□ -0.35
PDLIM7-210ENST00000503827 DUX4L6P0CJ89 424 aa12.86□□□□□ -0.35
PDLIM7-210ENST00000503827 DUX4L7P0CJ90 424 aa12.86□□□□□ -0.35
PDLIM7-210ENST00000503827 PF4V1P10720 104 aa12.86□□□□□ -0.35
PDLIM7-210ENST00000503827 RPL4P36578 427 aaKnown RBP12.86□□□□□ -0.35
PDLIM7-210ENST00000503827 HABP2Q14520 560 aaPredicted RBP12.86□□□□□ -0.35
PDLIM7-210ENST00000503827 MICBQ29980 383 aa12.86□□□□□ -0.35
PDLIM7-210ENST00000503827 DUX4L9Q6RFH8 374 aaPredicted RBP12.86□□□□□ -0.35
PDLIM7-210ENST00000503827 MRPL21Q7Z2W9 205 aaKnown RBP12.86□□□□□ -0.35
PDLIM7-210ENST00000503827 OAFQ86UD1 273 aa12.86□□□□□ -0.35
PDLIM7-210ENST00000503827 METTL8Q9H825 291 aaKnown RBP12.86□□□□□ -0.35
PDLIM7-210ENST00000503827 ZNF702PQ9H963 129 aa12.86□□□□□ -0.35
PDLIM7-210ENST00000503827 DUX4Q9UBX2 424 aa12.86□□□□□ -0.35
PDLIM7-210ENST00000503827 RPS6KA6Q9UK32 745 aa12.86□□□□□ -0.35
PDLIM7-210ENST00000503827 SF3B6Q9Y3B4 125 aaKnown RBP12.86□□□□□ -0.35
PDLIM7-210ENST00000503827 U3KQK5 164 aa12.86□□□□□ -0.35
PDLIM7-210ENST00000503827 EPPK1P58107 5090 aaKnown RBP12.85□□□□□ -0.35
PDLIM7-210ENST00000503827 A0A1W2PRX2 142 aa12.85□□□□□ -0.35
PDLIM7-210ENST00000503827 CHST1O43916 411 aa12.85□□□□□ -0.35
PDLIM7-210ENST00000503827 LCATP04180 440 aa12.85□□□□□ -0.35
PDLIM7-210ENST00000503827 ACSM4P0C7M7 580 aa12.85□□□□□ -0.35
PDLIM7-210ENST00000503827 NHLRC4P0CG21 123 aaPredicted RBP12.85□□□□□ -0.35
PDLIM7-210ENST00000503827 MUC1P15941 1255 aaPredicted RBP12.85□□□□□ -0.35
PDLIM7-210ENST00000503827 HIST1H3AP68431 136 aa12.85□□□□□ -0.35
PDLIM7-210ENST00000503827 MZT1Q08AG7 82 aa12.85□□□□□ -0.35
PDLIM7-210ENST00000503827 LRRC10Q5BKY1 277 aa12.85□□□□□ -0.35
PDLIM7-210ENST00000503827 MESTQ5EB52 335 aa12.85□□□□□ -0.35
PDLIM7-210ENST00000503827 WDR38Q5JTN6 314 aa12.85□□□□□ -0.35
PDLIM7-210ENST00000503827 HIST2H3PS2Q5TEC6 136 aa12.85□□□□□ -0.35
PDLIM7-210ENST00000503827 DLEU7Q6UYE1 221 aa12.85□□□□□ -0.35
PDLIM7-210ENST00000503827 HIST2H3AQ71DI3 136 aa12.85□□□□□ -0.35
PDLIM7-210ENST00000503827 FAM216BQ8N7L0 139 aa12.85□□□□□ -0.35
PDLIM7-210ENST00000503827 ANKRD42Q8N9B4 389 aa12.85□□□□□ -0.35
PDLIM7-210ENST00000503827 C8orf46Q8TAG6 207 aa12.85□□□□□ -0.35
PDLIM7-210ENST00000503827 C17orf50Q8WW18 174 aa12.85□□□□□ -0.35
PDLIM7-210ENST00000503827 H1FXQ92522 213 aaKnown RBP12.85□□□□□ -0.35
PDLIM7-210ENST00000503827 Q96M85 177 aa12.85□□□□□ -0.35
PDLIM7-210ENST00000503827 ZNF570Q96NI8 536 aa12.85□□□□□ -0.35
PDLIM7-210ENST00000503827 DDOQ99489 341 aa12.85□□□□□ -0.35
PDLIM7-210ENST00000503827 BAG5Q9UL15 447 aa12.85□□□□□ -0.35
PDLIM7-210ENST00000503827 ADAM18Q9Y3Q7 739 aa12.85□□□□□ -0.35
PDLIM7-210ENST00000503827 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.84□□□□□ -0.35
PDLIM7-210ENST00000503827 CD300LBA8K4G0 201 aa12.84□□□□□ -0.35
PDLIM7-210ENST00000503827 F5H5K5 113 aa12.84□□□□□ -0.35
PDLIM7-210ENST00000503827 M0R1W7 72 aa12.84□□□□□ -0.35
PDLIM7-210ENST00000503827 PF4P02776 101 aa12.84□□□□□ -0.35
PDLIM7-210ENST00000503827 TNFRSF1BP20333 461 aa12.84□□□□□ -0.35
PDLIM7-210ENST00000503827 MTPNP58546 118 aa12.84□□□□□ -0.35
PDLIM7-210ENST00000503827 ST3GAL3Q11203 375 aa12.84□□□□□ -0.35
PDLIM7-210ENST00000503827 IKZF1Q13422 519 aa12.84□□□□□ -0.35
PDLIM7-210ENST00000503827 BLMHQ13867 455 aa12.84□□□□□ -0.35
PDLIM7-210ENST00000503827 KCNMB1Q16558 191 aa12.84□□□□□ -0.35
PDLIM7-210ENST00000503827 RSPO1Q2MKA7 263 aaPredicted RBP12.84□□□□□ -0.35
PDLIM7-210ENST00000503827 PGM2L1Q6PCE3 622 aa12.84□□□□□ -0.35
PDLIM7-210ENST00000503827 Q8N2B8 174 aa12.84□□□□□ -0.35
PDLIM7-210ENST00000503827 WIPF2Q8TF74 440 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms