RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 OR51A7Q8NH64 312 aa12.17□□□□□ -0.46
HDAC6-224ENST00000481929 RORBQ92753 470 aa12.17□□□□□ -0.46
HDAC6-224ENST00000481929 SLCO4A1Q96BD0 722 aa12.17□□□□□ -0.46
HDAC6-224ENST00000481929 BPIFA2Q96DR5 249 aa12.17□□□□□ -0.46
HDAC6-224ENST00000481929 RERGLQ9H628 205 aa12.17□□□□□ -0.46
HDAC6-224ENST00000481929 SERTAD4Q9NUC0 356 aa12.17□□□□□ -0.46
HDAC6-224ENST00000481929 CCDC167Q9P0B6 97 aa12.17□□□□□ -0.46
HDAC6-224ENST00000481929 SH3GLB1Q9Y371 365 aa12.17□□□□□ -0.46
HDAC6-224ENST00000481929 TENM2Q9NT68 2774 aa12.16□□□□□ -0.46
HDAC6-224ENST00000481929 TRAV27A0A087WT01 109 aa12.16□□□□□ -0.46
HDAC6-224ENST00000481929 A0A1B0GW55 424 aa12.16□□□□□ -0.46
HDAC6-224ENST00000481929 HTR3EA5X5Y0 456 aa12.16□□□□□ -0.46
HDAC6-224ENST00000481929 AHCYL1O43865 530 aa12.16□□□□□ -0.46
HDAC6-224ENST00000481929 CHST1O43916 411 aa12.16□□□□□ -0.46
HDAC6-224ENST00000481929 GMDSO60547 372 aa12.16□□□□□ -0.46
HDAC6-224ENST00000481929 PEX14O75381 377 aa12.16□□□□□ -0.46
HDAC6-224ENST00000481929 DUX4L2P0CJ85 424 aa12.16□□□□□ -0.46
HDAC6-224ENST00000481929 DUX4L3P0CJ86 424 aa12.16□□□□□ -0.46
HDAC6-224ENST00000481929 DUX4L4P0CJ87 422 aa12.16□□□□□ -0.46
HDAC6-224ENST00000481929 DUX4L5P0CJ88 424 aa12.16□□□□□ -0.46
HDAC6-224ENST00000481929 DUX4L6P0CJ89 424 aa12.16□□□□□ -0.46
HDAC6-224ENST00000481929 DUX4L7P0CJ90 424 aa12.16□□□□□ -0.46
HDAC6-224ENST00000481929 PF4V1P10720 104 aa12.16□□□□□ -0.46
HDAC6-224ENST00000481929 ZNF26P17031 533 aaPredicted RBP12.16□□□□□ -0.46
HDAC6-224ENST00000481929 PIN1Q13526 163 aaPredicted RBP12.16□□□□□ -0.46
HDAC6-224ENST00000481929 DCTN2Q13561 401 aaKnown RBP12.16□□□□□ -0.46
HDAC6-224ENST00000481929 DOC2BQ14184 412 aa12.16□□□□□ -0.46
HDAC6-224ENST00000481929 HABP2Q14520 560 aaPredicted RBP12.16□□□□□ -0.46
HDAC6-224ENST00000481929 AANATQ16613 207 aa12.16□□□□□ -0.46
HDAC6-224ENST00000481929 KLHL22Q53GT1 634 aa12.16□□□□□ -0.46
HDAC6-224ENST00000481929 DUX4L9Q6RFH8 374 aaPredicted RBP12.16□□□□□ -0.46
HDAC6-224ENST00000481929 ZNF826PQ6ZT77 177 aa12.16□□□□□ -0.46
HDAC6-224ENST00000481929 SLC36A1Q7Z2H8 476 aa12.16□□□□□ -0.46
HDAC6-224ENST00000481929 MRPL21Q7Z2W9 205 aaKnown RBP12.16□□□□□ -0.46
HDAC6-224ENST00000481929 GLB1L2Q8IW92 636 aa12.16□□□□□ -0.46
HDAC6-224ENST00000481929 GJC3Q8NFK1 279 aa12.16□□□□□ -0.46
HDAC6-224ENST00000481929 C17orf50Q8WW18 174 aa12.16□□□□□ -0.46
HDAC6-224ENST00000481929 ACOT11Q8WXI4 607 aaPredicted RBP12.16□□□□□ -0.46
HDAC6-224ENST00000481929 RCC1LQ96I51 464 aaKnown RBP12.16□□□□□ -0.46
HDAC6-224ENST00000481929 CCL13Q99616 98 aa12.16□□□□□ -0.46
HDAC6-224ENST00000481929 DCTN5Q9BTE1 182 aa12.16□□□□□ -0.46
HDAC6-224ENST00000481929 TMEM109Q9BVC6 243 aa12.16□□□□□ -0.46
HDAC6-224ENST00000481929 ZNF702PQ9H963 129 aa12.16□□□□□ -0.46
HDAC6-224ENST00000481929 GRHPRQ9UBQ7 328 aa12.16□□□□□ -0.46
HDAC6-224ENST00000481929 DUX4Q9UBX2 424 aa12.16□□□□□ -0.46
HDAC6-224ENST00000481929 STAB2Q8WWQ8 2551 aa12.16□□□□□ -0.46
HDAC6-224ENST00000481929 RYR2Q92736 4967 aa12.15□□□□□ -0.46
HDAC6-224ENST00000481929 A0A1W2PRX2 142 aa12.15□□□□□ -0.46
HDAC6-224ENST00000481929 PRSS37A4D1T9 235 aa12.15□□□□□ -0.46
HDAC6-224ENST00000481929 NDUFB3O43676 98 aa12.15□□□□□ -0.46
HDAC6-224ENST00000481929 KHDRBS3O75525 346 aaKnown RBP12.15□□□□□ -0.46
HDAC6-224ENST00000481929 DUS4LO95620 317 aaKnown RBP12.15□□□□□ -0.46
HDAC6-224ENST00000481929 PF4P02776 101 aa12.15□□□□□ -0.46
HDAC6-224ENST00000481929 GRPP07492 148 aa12.15□□□□□ -0.46
HDAC6-224ENST00000481929 RPL4P36578 427 aaKnown RBP12.15□□□□□ -0.46
HDAC6-224ENST00000481929 ECH1Q13011 328 aa12.15□□□□□ -0.46
HDAC6-224ENST00000481929 MICBQ29980 383 aa12.15□□□□□ -0.46
HDAC6-224ENST00000481929 ANKDD1AQ495B1 522 aa12.15□□□□□ -0.46
HDAC6-224ENST00000481929 MESTQ5EB52 335 aa12.15□□□□□ -0.46
HDAC6-224ENST00000481929 WDR38Q5JTN6 314 aa12.15□□□□□ -0.46
HDAC6-224ENST00000481929 OAFQ86UD1 273 aa12.15□□□□□ -0.46
HDAC6-224ENST00000481929 FAM216BQ8N7L0 139 aa12.15□□□□□ -0.46
HDAC6-224ENST00000481929 H1FXQ92522 213 aaKnown RBP12.15□□□□□ -0.46
HDAC6-224ENST00000481929 METTL8Q9H825 291 aaKnown RBP12.15□□□□□ -0.46
HDAC6-224ENST00000481929 RPS6KA6Q9UK32 745 aa12.15□□□□□ -0.46
HDAC6-224ENST00000481929 PRPF19Q9UMS4 504 aaKnown RBP12.15□□□□□ -0.46
HDAC6-224ENST00000481929 COA3Q9Y2R0 106 aaPredicted RBP12.15□□□□□ -0.46
HDAC6-224ENST00000481929 SF3B6Q9Y3B4 125 aaKnown RBP12.15□□□□□ -0.46
HDAC6-224ENST00000481929 ADAM18Q9Y3Q7 739 aa12.15□□□□□ -0.46
HDAC6-224ENST00000481929 PCDHGB5Q9Y5G0 923 aa12.15□□□□□ -0.46
HDAC6-224ENST00000481929 U3KQK5 164 aa12.15□□□□□ -0.46
HDAC6-224ENST00000481929 SLC16A7O60669 478 aa12.14□□□□□ -0.47
HDAC6-224ENST00000481929 LHBP01229 141 aa12.14□□□□□ -0.47
HDAC6-224ENST00000481929 NHLRC4P0CG21 123 aaPredicted RBP12.14□□□□□ -0.47
HDAC6-224ENST00000481929 MUC1P15941 1255 aaPredicted RBP12.14□□□□□ -0.47
HDAC6-224ENST00000481929 TNFRSF1BP20333 461 aa12.14□□□□□ -0.47
HDAC6-224ENST00000481929 BMXP51813 675 aa12.14□□□□□ -0.47
HDAC6-224ENST00000481929 MTPNP58546 118 aa12.14□□□□□ -0.47
HDAC6-224ENST00000481929 HIST1H3AP68431 136 aa12.14□□□□□ -0.47
HDAC6-224ENST00000481929 IKZF1Q13422 519 aa12.14□□□□□ -0.47
HDAC6-224ENST00000481929 PCK2Q16822 640 aa12.14□□□□□ -0.47
HDAC6-224ENST00000481929 LRRC10Q5BKY1 277 aa12.14□□□□□ -0.47
HDAC6-224ENST00000481929 HIST2H3PS2Q5TEC6 136 aa12.14□□□□□ -0.47
HDAC6-224ENST00000481929 DLEU7Q6UYE1 221 aa12.14□□□□□ -0.47
HDAC6-224ENST00000481929 HIST2H3AQ71DI3 136 aa12.14□□□□□ -0.47
HDAC6-224ENST00000481929 ANKRD42Q8N9B4 389 aa12.14□□□□□ -0.47
HDAC6-224ENST00000481929 C8orf46Q8TAG6 207 aa12.14□□□□□ -0.47
HDAC6-224ENST00000481929 WIPF2Q8TF74 440 aaPredicted RBP12.14□□□□□ -0.47
HDAC6-224ENST00000481929 Q96M85 177 aa12.14□□□□□ -0.47
HDAC6-224ENST00000481929 ZNF570Q96NI8 536 aa12.14□□□□□ -0.47
HDAC6-224ENST00000481929 DDOQ99489 341 aa12.14□□□□□ -0.47
HDAC6-224ENST00000481929 MEGF9Q9H1U4 602 aa12.14□□□□□ -0.47
HDAC6-224ENST00000481929 SYT4Q9H2B2 425 aa12.14□□□□□ -0.47
HDAC6-224ENST00000481929 BAG5Q9UL15 447 aa12.14□□□□□ -0.47
HDAC6-224ENST00000481929 DYNC2H1Q8NCM8 4307 aaKnown RBP12.14□□□□□ -0.47
HDAC6-224ENST00000481929 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.13□□□□□ -0.47
HDAC6-224ENST00000481929 CD300LBA8K4G0 201 aa12.13□□□□□ -0.47
HDAC6-224ENST00000481929 F5H5K5 113 aa12.13□□□□□ -0.47
HDAC6-224ENST00000481929 M0R1W7 72 aa12.13□□□□□ -0.47
HDAC6-224ENST00000481929 LCATP04180 440 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms