RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 CNTD2Q9H8S5 307 aa11.87□□□□□ -0.51
PDZRN3-208ENST00000479530 PDE7BQ9NP56 450 aa11.87□□□□□ -0.51
PDZRN3-208ENST00000479530 DCAF16Q9NXF7 216 aa11.87□□□□□ -0.51
PDZRN3-208ENST00000479530 PRODH2Q9UF12 536 aa11.87□□□□□ -0.51
PDZRN3-208ENST00000479530 EDARQ9UNE0 448 aa11.87□□□□□ -0.51
PDZRN3-208ENST00000479530 FREM2Q5SZK8 3169 aa11.87□□□□□ -0.51
PDZRN3-208ENST00000479530 DBX1A6NMT0 343 aa11.86□□□□□ -0.51
PDZRN3-208ENST00000479530 TMEM150CB9EJG8 249 aa11.86□□□□□ -0.51
PDZRN3-208ENST00000479530 XKRYO14609 159 aa11.86□□□□□ -0.51
PDZRN3-208ENST00000479530 OR6A2O95222 327 aa11.86□□□□□ -0.51
PDZRN3-208ENST00000479530 NUDT14O95848 222 aa11.86□□□□□ -0.51
PDZRN3-208ENST00000479530 ARRB1P49407 418 aaPredicted RBP11.86□□□□□ -0.51
PDZRN3-208ENST00000479530 HABP2Q14520 560 aaPredicted RBP11.86□□□□□ -0.51
PDZRN3-208ENST00000479530 MEF2DQ14814 521 aa11.86□□□□□ -0.51
PDZRN3-208ENST00000479530 PTCRAQ6ISU1 281 aaPredicted RBP11.86□□□□□ -0.51
PDZRN3-208ENST00000479530 C9orf40Q8IXQ3 194 aa11.86□□□□□ -0.51
PDZRN3-208ENST00000479530 ZNF775Q96BV0 537 aaPredicted RBP11.86□□□□□ -0.51
PDZRN3-208ENST00000479530 NRIP2Q9BQI9 281 aa11.86□□□□□ -0.51
PDZRN3-208ENST00000479530 SEC11CQ9BY50 192 aa11.86□□□□□ -0.51
PDZRN3-208ENST00000479530 MMP26Q9NRE1 261 aa11.86□□□□□ -0.51
PDZRN3-208ENST00000479530 CUTCQ9NTM9 273 aa11.86□□□□□ -0.51
PDZRN3-208ENST00000479530 OR5AC2Q9NZP5 309 aa11.86□□□□□ -0.51
PDZRN3-208ENST00000479530 WDFY4Q6ZS81 3184 aa11.86□□□□□ -0.51
PDZRN3-208ENST00000479530 IGHV3-20A0A0C4DH32 117 aa11.86□□□□□ -0.51
PDZRN3-208ENST00000479530 LOC107986453A0A1B0GWG9 222 aa11.86□□□□□ -0.51
PDZRN3-208ENST00000479530 PRSS37A4D1T9 235 aa11.86□□□□□ -0.51
PDZRN3-208ENST00000479530 COLCA2A8K830 154 aa11.86□□□□□ -0.51
PDZRN3-208ENST00000479530 H3BMH7 237 aa11.86□□□□□ -0.51
PDZRN3-208ENST00000479530 PHYHO14832 338 aa11.86□□□□□ -0.51
PDZRN3-208ENST00000479530 AGPAT2O15120 278 aa11.86□□□□□ -0.51
PDZRN3-208ENST00000479530 IGKV3-11P04433 115 aa11.86□□□□□ -0.51
PDZRN3-208ENST00000479530 PI3P19957 117 aa11.86□□□□□ -0.51
PDZRN3-208ENST00000479530 DNASE1L1P49184 302 aa11.86□□□□□ -0.51
PDZRN3-208ENST00000479530 ELAVL1Q15717 326 aaKnown RBP11.86□□□□□ -0.51
PDZRN3-208ENST00000479530 RAB30Q15771 203 aa11.86□□□□□ -0.51
PDZRN3-208ENST00000479530 LYPD6Q86Y78 171 aa11.86□□□□□ -0.51
PDZRN3-208ENST00000479530 WDFY1Q8IWB7 410 aa11.86□□□□□ -0.51
PDZRN3-208ENST00000479530 METTL21AQ8WXB1 218 aa11.86□□□□□ -0.51
PDZRN3-208ENST00000479530 OR11A1Q9GZK7 315 aa11.86□□□□□ -0.51
PDZRN3-208ENST00000479530 RHOFQ9HBH0 211 aa11.86□□□□□ -0.51
PDZRN3-208ENST00000479530 RCC2Q9P258 522 aaKnown RBP11.86□□□□□ -0.51
PDZRN3-208ENST00000479530 SLC5A6Q9Y289 635 aa11.86□□□□□ -0.51
PDZRN3-208ENST00000479530 IGLV1-36A0A0B4J1U3 117 aa11.85□□□□□ -0.51
PDZRN3-208ENST00000479530 DUS4LO95620 317 aaKnown RBP11.85□□□□□ -0.51
PDZRN3-208ENST00000479530 ID4P47928 161 aa11.85□□□□□ -0.51
PDZRN3-208ENST00000479530 RIDAP52758 137 aaKnown RBP11.85□□□□□ -0.51
PDZRN3-208ENST00000479530 ROM1Q03395 351 aa11.85□□□□□ -0.51
PDZRN3-208ENST00000479530 PJVKQ0ZLH3 352 aa11.85□□□□□ -0.51
PDZRN3-208ENST00000479530 ADAM19Q9H013 955 aa11.85□□□□□ -0.51
PDZRN3-208ENST00000479530 PTGES2Q9H7Z7 377 aa11.85□□□□□ -0.51
PDZRN3-208ENST00000479530 A0A1W2PR77 199 aa11.85□□□□□ -0.51
PDZRN3-208ENST00000479530 CD37P11049 281 aa11.85□□□□□ -0.51
PDZRN3-208ENST00000479530 NME1P15531 152 aaKnown RBP11.85□□□□□ -0.51
PDZRN3-208ENST00000479530 FSTP19883 344 aa11.85□□□□□ -0.51
PDZRN3-208ENST00000479530 IL11P20809 199 aa11.85□□□□□ -0.51
PDZRN3-208ENST00000479530 TGIF1Q15583 401 aa11.85□□□□□ -0.51
PDZRN3-208ENST00000479530 SGCAQ16586 387 aa11.85□□□□□ -0.51
PDZRN3-208ENST00000479530 ZNF585AQ6P3V2 769 aa11.85□□□□□ -0.51
PDZRN3-208ENST00000479530 TMPRSS9Q7Z410 1059 aa11.85□□□□□ -0.51
PDZRN3-208ENST00000479530 LINC00346Q8IVM7 164 aa11.85□□□□□ -0.51
PDZRN3-208ENST00000479530 ZDHHC22Q8N966 263 aa11.85□□□□□ -0.51
PDZRN3-208ENST00000479530 OR51F2Q8NH61 342 aa11.85□□□□□ -0.51
PDZRN3-208ENST00000479530 LPAR3Q9UBY5 353 aa11.85□□□□□ -0.51
PDZRN3-208ENST00000479530 SPAG17Q6Q759 2223 aa11.85□□□□□ -0.51
PDZRN3-208ENST00000479530 COL6A3P12111 3177 aa11.85□□□□□ -0.51
PDZRN3-208ENST00000479530 HSPB2A8KAH6 182 aa11.84□□□□□ -0.51
PDZRN3-208ENST00000479530 P2RY10O00398 339 aa11.84□□□□□ -0.51
PDZRN3-208ENST00000479530 SSX5O60225 188 aa11.84□□□□□ -0.51
PDZRN3-208ENST00000479530 BGLAPP02818 100 aa11.84□□□□□ -0.51
PDZRN3-208ENST00000479530 FOLR1P15328 257 aa11.84□□□□□ -0.51
PDZRN3-208ENST00000479530 CD38P28907 300 aa11.84□□□□□ -0.51
PDZRN3-208ENST00000479530 SLC9A3R2Q15599 337 aa11.84□□□□□ -0.51
PDZRN3-208ENST00000479530 HSPB2Q16082 182 aa11.84□□□□□ -0.51
PDZRN3-208ENST00000479530 LANCL3Q6ZV70 420 aa11.84□□□□□ -0.51
PDZRN3-208ENST00000479530 ZNF440Q8IYI8 595 aa11.84□□□□□ -0.51
PDZRN3-208ENST00000479530 OR52N4Q8NGI2 321 aa11.84□□□□□ -0.51
PDZRN3-208ENST00000479530 OR1L3Q8NH93 324 aa11.84□□□□□ -0.51
PDZRN3-208ENST00000479530 DUSP15Q9H1R2 295 aaPredicted RBP11.84□□□□□ -0.51
PDZRN3-208ENST00000479530 LMAN1LQ9HAT1 526 aa11.84□□□□□ -0.51
PDZRN3-208ENST00000479530 G6PC2Q9NQR9 355 aa11.84□□□□□ -0.51
PDZRN3-208ENST00000479530 TMEM131Q92545 1883 aa11.84□□□□□ -0.51
PDZRN3-208ENST00000479530 TRBV6-7A0A0A0MS04 114 aa11.84□□□□□ -0.51
PDZRN3-208ENST00000479530 SRSF10O75494 262 aaKnown RBP11.84□□□□□ -0.51
PDZRN3-208ENST00000479530 HLA-DOBP13765 273 aa11.84□□□□□ -0.51
PDZRN3-208ENST00000479530 RCC1P18754 421 aaPredicted RBP11.84□□□□□ -0.51
PDZRN3-208ENST00000479530 LPAR6P43657 344 aa11.84□□□□□ -0.51
PDZRN3-208ENST00000479530 CSNK1EP49674 416 aaKnown RBP11.84□□□□□ -0.51
PDZRN3-208ENST00000479530 BIKQ13323 160 aa11.84□□□□□ -0.51
PDZRN3-208ENST00000479530 NSDHLQ15738 373 aa11.84□□□□□ -0.51
PDZRN3-208ENST00000479530 TSTD1Q8NFU3 115 aa11.84□□□□□ -0.51
PDZRN3-208ENST00000479530 ASB17Q8WXJ9 295 aa11.84□□□□□ -0.51
PDZRN3-208ENST00000479530 THRSPQ92748 146 aa11.84□□□□□ -0.51
PDZRN3-208ENST00000479530 SLC46A1Q96NT5 459 aa11.84□□□□□ -0.51
PDZRN3-208ENST00000479530 NICN1Q9BSH3 213 aa11.84□□□□□ -0.51
PDZRN3-208ENST00000479530 LAT2Q9GZY6 243 aa11.84□□□□□ -0.51
PDZRN3-208ENST00000479530 ZNF107Q9UII5 783 aaPredicted RBP11.84□□□□□ -0.51
PDZRN3-208ENST00000479530 CA14Q9ULX7 337 aa11.84□□□□□ -0.51
PDZRN3-208ENST00000479530 HHLA2Q9UM44 414 aa11.84□□□□□ -0.51
PDZRN3-208ENST00000479530 COA3Q9Y2R0 106 aaPredicted RBP11.84□□□□□ -0.51
PDZRN3-208ENST00000479530 PCDHGA1Q9Y5H4 931 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms