RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 CENPOQ9BU64 300 aa-0.82□□□□□ -2.54
CALD1-218ENST00000478075 EDEM2Q9BV94 578 aa-0.82□□□□□ -2.54
CALD1-218ENST00000478075 ZNF436Q9C0F3 470 aaPredicted RBP-0.82□□□□□ -2.54
CALD1-218ENST00000478075 SLC5A7Q9GZV3 580 aa-0.82□□□□□ -2.54
CALD1-218ENST00000478075 TDRD3Q9H7E2 651 aaKnown RBP-0.82□□□□□ -2.54
CALD1-218ENST00000478075 VSIRQ9H7M9 311 aa-0.82□□□□□ -2.54
CALD1-218ENST00000478075 ECT2Q9H8V3 914 aa-0.82□□□□□ -2.54
CALD1-218ENST00000478075 SLC7A8Q9UHI5 535 aa-0.82□□□□□ -2.54
CALD1-218ENST00000478075 GLS2Q9UI32 602 aa-0.82□□□□□ -2.54
CALD1-218ENST00000478075 PPIL1Q9Y3C6 166 aa-0.82□□□□□ -2.54
CALD1-218ENST00000478075 PUS1Q9Y606 427 aaKnown RBP eCLIP-0.82□□□□□ -2.54
CALD1-218ENST00000478075 LHFPL6Q9Y693 200 aa-0.82□□□□□ -2.54
CALD1-218ENST00000478075 HSPE1-MOB4S4R3N1 261 aa-0.82□□□□□ -2.54
CALD1-218ENST00000478075 WNK1Q9H4A3 2382 aa-0.82□□□□□ -2.54
CALD1-218ENST00000478075 PLCH2O75038 1416 aa-0.82□□□□□ -2.54
CALD1-218ENST00000478075 MUC17Q685J3 4493 aa-0.82□□□□□ -2.54
CALD1-218ENST00000478075 DHX29Q7Z478 1369 aaKnown RBP-0.83□□□□□ -2.54
CALD1-218ENST00000478075 PKD1L1Q8TDX9 2849 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 CNOT1A5YKK6 2376 aaKnown RBP-0.83□□□□□ -2.54
CALD1-218ENST00000478075 USP42Q9H9J4 1324 aaKnown RBP-0.83□□□□□ -2.54
CALD1-218ENST00000478075 KDM5BQ9UGL1 1544 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 IGHV3-64A0A075B6Q5 118 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 A0A087WSZ3 146 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 A0A1B0GU33 70 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 LINC00854A0A1B0GVQ3 168 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 CLRN2A0PK11 232 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 OR5H1A6NKK0 313 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 C19orf84I3L1E1 186 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 J3QQQ9 107 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 PLPP3O14495 311 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 SOX15O60248 233 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 SLC22A5O76082 557 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 LY6HO94772 140 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 KRT75O95678 551 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 CRPP02741 224 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 SNRPAP09012 282 aaKnown RBP-0.83□□□□□ -2.54
CALD1-218ENST00000478075 CCL5P13501 91 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 CTRB1P17538 263 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 ELK4P28324 431 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 KIF5BP33176 963 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 SERPINB5P36952 375 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 SLC1A2P43004 574 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 GABRA4P48169 554 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 UBE2NP61088 152 aaKnown RBP-0.83□□□□□ -2.54
CALD1-218ENST00000478075 RPL26P61254 145 aaKnown RBP-0.83□□□□□ -2.54
CALD1-218ENST00000478075 CDK16Q00536 496 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 DMTNQ08495 405 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 CDH17Q12864 832 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 C1orf61Q13536 156 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 RCN2Q14257 317 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 MXD4Q14582 209 aaPredicted RBP-0.83□□□□□ -2.54
CALD1-218ENST00000478075 TAL2Q16559 108 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 LRRC75BQ2VPJ9 315 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 MAJINQ3KP22 176 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 GLYATQ6IB77 296 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 LRRC8BQ6P9F7 803 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 C2orf91Q6ZV80 131 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 CENPUQ71F23 418 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 DHDDSQ86SQ9 333 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 AMN1Q8IY45 258 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 CLECL1Q8IZS7 167 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 MRPL43Q8N983 215 aaKnown RBP-0.83□□□□□ -2.54
CALD1-218ENST00000478075 HSD17B11Q8NBQ5 300 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 PSMA8Q8TAA3 256 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 DCPSQ96C86 337 aaKnown RBP-0.83□□□□□ -2.54
CALD1-218ENST00000478075 SLC35G5Q96KT7 338 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 ERMAPQ96PL5 475 aaPredicted RBP-0.83□□□□□ -2.54
CALD1-218ENST00000478075 OR8B2Q96RD0 313 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 NPY6RQ99463 290 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 B9D2Q9BPU9 175 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 MARVELD1Q9BSK0 173 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 KIFC1Q9BW19 673 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 GGTLC1Q9BX51 225 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 CHRNA10Q9GZZ6 450 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 NEUROG2Q9H2A3 272 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 ABCB9Q9NP78 766 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 PRMT8Q9NR22 394 aaPredicted RBP-0.83□□□□□ -2.54
CALD1-218ENST00000478075 RPL26L1Q9UNX3 145 aaKnown RBP-0.83□□□□□ -2.54
CALD1-218ENST00000478075 ZFP30Q9Y2G7 519 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 SNURFQ9Y675 71 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 MTCH2Q9Y6C9 303 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 NIPBLQ6KC79 2804 aaeCLIP-0.83□□□□□ -2.54
CALD1-218ENST00000478075 ANK2Q01484 3957 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 CITO14578 2027 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 POLQO75417 2590 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.83□□□□□ -2.54
CALD1-218ENST00000478075 RTL1A6NKG5 1358 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 KDRP35968 1356 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 TNIKQ9UKE5 1360 aa-0.83□□□□□ -2.54
CALD1-218ENST00000478075 PKHD1P08F94 4074 aa-0.84□□□□□ -2.54
CALD1-218ENST00000478075 MYO18BQ8IUG5 2567 aa-0.84□□□□□ -2.54
CALD1-218ENST00000478075 UBN2Q6ZU65 1347 aa-0.84□□□□□ -2.54
CALD1-218ENST00000478075 MUC4Q99102 2169 aa-0.84□□□□□ -2.54
CALD1-218ENST00000478075 SLX4Q8IY92 1834 aa-0.84□□□□□ -2.54
CALD1-218ENST00000478075 MYH11P35749 1972 aa-0.84□□□□□ -2.54
CALD1-218ENST00000478075 YLPM1P49750 1951 aaKnown RBP-0.84□□□□□ -2.54
CALD1-218ENST00000478075 TRAV19A0A0A6YYK7 116 aa-0.84□□□□□ -2.54
CALD1-218ENST00000478075 A0A1B0GWJ7 208 aa-0.84□□□□□ -2.54
CALD1-218ENST00000478075 FAM230AA0A1W2PPH8 454 aa-0.84□□□□□ -2.54
CALD1-218ENST00000478075 A0A1W2PRG6 482 aa-0.84□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms