RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 OR10K2Q6IF99 312 aa13.51□□□□□ -0.25
RPUSD3-215ENST00000475470 ZNF529Q6P280 563 aa13.51□□□□□ -0.25
RPUSD3-215ENST00000475470 PGAP1Q75T13 922 aa13.51□□□□□ -0.25
RPUSD3-215ENST00000475470 MEIOBQ8N635 442 aa13.51□□□□□ -0.25
RPUSD3-215ENST00000475470 MDS2Q8NDY4 140 aa13.51□□□□□ -0.25
RPUSD3-215ENST00000475470 SPTSSAQ969W0 71 aa13.51□□□□□ -0.25
RPUSD3-215ENST00000475470 ACTR6Q9GZN1 396 aa13.51□□□□□ -0.25
RPUSD3-215ENST00000475470 TMEM38BQ9NVV0 291 aa13.51□□□□□ -0.25
RPUSD3-215ENST00000475470 MTFP1Q9UDX5 166 aa13.51□□□□□ -0.25
RPUSD3-215ENST00000475470 RHBDD3Q9Y3P4 386 aa13.51□□□□□ -0.25
RPUSD3-215ENST00000475470 OTOGLQ3ZCN5 2332 aa13.51□□□□□ -0.25
RPUSD3-215ENST00000475470 PRR33A8MZF0 331 aa13.5□□□□□ -0.25
RPUSD3-215ENST00000475470 CD46P15529 392 aa13.5□□□□□ -0.25
RPUSD3-215ENST00000475470 CLDN18P56856 261 aa13.5□□□□□ -0.25
RPUSD3-215ENST00000475470 PCGF3Q3KNV8 242 aa13.5□□□□□ -0.25
RPUSD3-215ENST00000475470 TMEM255AQ5JRV8 349 aa13.5□□□□□ -0.25
RPUSD3-215ENST00000475470 PTX4Q96A99 478 aa13.5□□□□□ -0.25
RPUSD3-215ENST00000475470 SCMH1Q96GD3 660 aa13.5□□□□□ -0.25
RPUSD3-215ENST00000475470 ING3Q9NXR8 418 aa13.5□□□□□ -0.25
RPUSD3-215ENST00000475470 NKIRAS2Q9NYR9 191 aa13.5□□□□□ -0.25
RPUSD3-215ENST00000475470 M0R135 149 aa13.5□□□□□ -0.25
RPUSD3-215ENST00000475470 SYNGR4O95473 234 aa13.5□□□□□ -0.25
RPUSD3-215ENST00000475470 CST2P09228 141 aa13.5□□□□□ -0.25
RPUSD3-215ENST00000475470 B4GALT1P15291 398 aa13.5□□□□□ -0.25
RPUSD3-215ENST00000475470 ZNF93P35789 620 aaPredicted RBP13.5□□□□□ -0.25
RPUSD3-215ENST00000475470 RRADP55042 308 aa13.5□□□□□ -0.25
RPUSD3-215ENST00000475470 OLFML2AQ68BL7 652 aa13.5□□□□□ -0.25
RPUSD3-215ENST00000475470 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.5□□□□□ -0.25
RPUSD3-215ENST00000475470 OR56B4Q8NH76 319 aa13.5□□□□□ -0.25
RPUSD3-215ENST00000475470 ZNF799Q96GE5 643 aa13.5□□□□□ -0.25
RPUSD3-215ENST00000475470 TAS2R8Q9NYW2 309 aa13.5□□□□□ -0.25
RPUSD3-215ENST00000475470 NOSIPQ9Y314 301 aaKnown RBP13.5□□□□□ -0.25
RPUSD3-215ENST00000475470 E9PLN8 166 aa13.49□□□□□ -0.25
RPUSD3-215ENST00000475470 SGCEO43556 437 aa13.49□□□□□ -0.25
RPUSD3-215ENST00000475470 ALDOBP05062 364 aa13.49□□□□□ -0.25
RPUSD3-215ENST00000475470 CSF1P09603 554 aa13.49□□□□□ -0.25
RPUSD3-215ENST00000475470 ZNF708P17019 499 aa13.49□□□□□ -0.25
RPUSD3-215ENST00000475470 PSMB1P20618 241 aaKnown RBP13.49□□□□□ -0.25
RPUSD3-215ENST00000475470 RAG2P55895 527 aa13.49□□□□□ -0.25
RPUSD3-215ENST00000475470 PPIAP62937 165 aaKnown RBP13.49□□□□□ -0.25
RPUSD3-215ENST00000475470 GUCA2AQ02747 115 aa13.49□□□□□ -0.25
RPUSD3-215ENST00000475470 RSPO1Q2MKA7 263 aaPredicted RBP13.49□□□□□ -0.25
RPUSD3-215ENST00000475470 CEACAM16Q2WEN9 425 aa13.49□□□□□ -0.25
RPUSD3-215ENST00000475470 RIPPLY2Q5TAB7 128 aa13.49□□□□□ -0.25
RPUSD3-215ENST00000475470 FOXB1Q99853 325 aa13.49□□□□□ -0.25
RPUSD3-215ENST00000475470 C20orf85Q9H1P6 137 aa13.49□□□□□ -0.25
RPUSD3-215ENST00000475470 MED28Q9H204 178 aa13.49□□□□□ -0.25
RPUSD3-215ENST00000475470 RAB22AQ9UL26 194 aa13.49□□□□□ -0.25
RPUSD3-215ENST00000475470 A0A0A6YYH2 397 aa13.49□□□□□ -0.25
RPUSD3-215ENST00000475470 A0A0U1RQV5 110 aa13.49□□□□□ -0.25
RPUSD3-215ENST00000475470 C7orf66A4D0T2 115 aa13.49□□□□□ -0.25
RPUSD3-215ENST00000475470 C5orf63A6NC05 138 aa13.49□□□□□ -0.25
RPUSD3-215ENST00000475470 METTL21EPA6NDL7 271 aa13.49□□□□□ -0.25
RPUSD3-215ENST00000475470 A6NJ64 397 aa13.49□□□□□ -0.25
RPUSD3-215ENST00000475470 CDK2AP1O14519 115 aa13.49□□□□□ -0.25
RPUSD3-215ENST00000475470 MRPL33O75394 65 aaKnown RBP13.49□□□□□ -0.25
RPUSD3-215ENST00000475470 BPNT1O95861 308 aa13.49□□□□□ -0.25
RPUSD3-215ENST00000475470 DBHP09172 617 aa13.49□□□□□ -0.25
RPUSD3-215ENST00000475470 RAB6AP20340 208 aa13.49□□□□□ -0.25
RPUSD3-215ENST00000475470 OTX1P32242 354 aaPredicted RBP13.49□□□□□ -0.25
RPUSD3-215ENST00000475470 ARG2P78540 354 aa13.49□□□□□ -0.25
RPUSD3-215ENST00000475470 SCRN3Q0VDG4 424 aa13.49□□□□□ -0.25
RPUSD3-215ENST00000475470 PMPCAQ10713 525 aa13.49□□□□□ -0.25
RPUSD3-215ENST00000475470 TCF15Q12870 199 aa13.49□□□□□ -0.25
RPUSD3-215ENST00000475470 RAB35Q15286 201 aa13.49□□□□□ -0.25
RPUSD3-215ENST00000475470 FAAP20Q6NZ36 180 aa13.49□□□□□ -0.25
RPUSD3-215ENST00000475470 VASH2Q86V25 355 aa13.49□□□□□ -0.25
RPUSD3-215ENST00000475470 OR14K1Q8NGZ2 314 aa13.49□□□□□ -0.25
RPUSD3-215ENST00000475470 TMEM45BQ96B21 275 aa13.49□□□□□ -0.25
RPUSD3-215ENST00000475470 GPR35Q9HC97 309 aa13.49□□□□□ -0.25
RPUSD3-215ENST00000475470 PAQR5Q9NXK6 330 aaPredicted RBP13.49□□□□□ -0.25
RPUSD3-215ENST00000475470 SDHBP21912 280 aa13.48□□□□□ -0.25
RPUSD3-215ENST00000475470 FAUP35544 74 aaKnown RBP13.48□□□□□ -0.25
RPUSD3-215ENST00000475470 AWAT2Q6E213 333 aa13.48□□□□□ -0.25
RPUSD3-215ENST00000475470 ANGPTL5Q86XS5 388 aa13.48□□□□□ -0.25
RPUSD3-215ENST00000475470 DACT3Q96B18 629 aaPredicted RBP13.48□□□□□ -0.25
RPUSD3-215ENST00000475470 LYZL4Q96KX0 146 aa13.48□□□□□ -0.25
RPUSD3-215ENST00000475470 SPACA5Q96QH8 159 aa13.48□□□□□ -0.25
RPUSD3-215ENST00000475470 GHITMQ9H3K2 345 aa13.48□□□□□ -0.25
RPUSD3-215ENST00000475470 MCTS1Q9ULC4 181 aaKnown RBP13.48□□□□□ -0.25
RPUSD3-215ENST00000475470 IGKV3D-15A0A087WSY6 115 aa13.48□□□□□ -0.25
RPUSD3-215ENST00000475470 MEIS3P1A6NDR6 274 aa13.48□□□□□ -0.25
RPUSD3-215ENST00000475470 ITGB2P05107 769 aa13.48□□□□□ -0.25
RPUSD3-215ENST00000475470 HCKP08631 526 aa13.48□□□□□ -0.25
RPUSD3-215ENST00000475470 GSG1Q2KHT4 349 aa13.48□□□□□ -0.25
RPUSD3-215ENST00000475470 HYAL4Q2M3T9 481 aa13.48□□□□□ -0.25
RPUSD3-215ENST00000475470 ZNF774Q6NX45 483 aa13.48□□□□□ -0.25
RPUSD3-215ENST00000475470 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.48□□□□□ -0.25
RPUSD3-215ENST00000475470 TCTE3Q8IZS6 198 aa13.48□□□□□ -0.25
RPUSD3-215ENST00000475470 OR5AS1Q8N127 324 aa13.48□□□□□ -0.25
RPUSD3-215ENST00000475470 GIMAP1Q8WWP7 306 aa13.48□□□□□ -0.25
RPUSD3-215ENST00000475470 DEDD2Q8WXF8 326 aa13.48□□□□□ -0.25
RPUSD3-215ENST00000475470 PRRG4Q9BZD6 226 aa13.48□□□□□ -0.25
RPUSD3-215ENST00000475470 ASCL3Q9NQ33 180 aa13.48□□□□□ -0.25
RPUSD3-215ENST00000475470 EMC3Q9P0I2 261 aa13.48□□□□□ -0.25
RPUSD3-215ENST00000475470 IGLV3-1P01715 115 aa13.47□□□□□ -0.25
RPUSD3-215ENST00000475470 IGHV3-9P01782 118 aa13.47□□□□□ -0.25
RPUSD3-215ENST00000475470 LIPCP11150 499 aa13.47□□□□□ -0.25
RPUSD3-215ENST00000475470 STOMP27105 288 aa13.47□□□□□ -0.25
RPUSD3-215ENST00000475470 MRPS15P82914 257 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms