RNA–Protein interactions for RNA: ENST00000475445.1

GGA1-218, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 2,614 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-218	ENST00000475445	RARRES3	Q9UL19	164 aa		12.8	□□□□□ -0.36
GGA1-218	ENST00000475445	VDAC3	Q9Y277	283 aa		12.8	□□□□□ -0.36
GGA1-218	ENST00000475445	TMEM269	A0A1B0GVZ9	245 aa		12.8	□□□□□ -0.36
GGA1-218	ENST00000475445	UBE2C	O00762	179 aa		12.8	□□□□□ -0.36
GGA1-218	ENST00000475445	LDLRAD4	O15165	306 aa		12.8	□□□□□ -0.36
GGA1-218	ENST00000475445	SCRG1	O75711	98 aa		12.8	□□□□□ -0.36
GGA1-218	ENST00000475445	TOX	O94900	526 aa		12.8	□□□□□ -0.36
GGA1-218	ENST00000475445	H2BFM	P0C1H6	154 aa		12.8	□□□□□ -0.36
GGA1-218	ENST00000475445	VSIG10L2	P0DP72	767 aa		12.8	□□□□□ -0.36
GGA1-218	ENST00000475445	CXCL12	P48061	93 aa		12.8	□□□□□ -0.36
GGA1-218	ENST00000475445	MMP16	P51512	607 aa		12.8	□□□□□ -0.36
GGA1-218	ENST00000475445	ZNF41	P51814	821 aa	Predicted RBP	12.8	□□□□□ -0.36
GGA1-218	ENST00000475445	TAS2R19	P59542	299 aa		12.8	□□□□□ -0.36
GGA1-218	ENST00000475445	ECH1	Q13011	328 aa		12.8	□□□□□ -0.36
GGA1-218	ENST00000475445	NR0B2	Q15466	257 aa		12.8	□□□□□ -0.36
GGA1-218	ENST00000475445	ACER2	Q5QJU3	275 aa		12.8	□□□□□ -0.36
GGA1-218	ENST00000475445	TMEM229B	Q8NBD8	167 aa		12.8	□□□□□ -0.36
GGA1-218	ENST00000475445	ADPRHL1	Q8NDY3	354 aa		12.8	□□□□□ -0.36
GGA1-218	ENST00000475445	COQ8A	Q8NI60	647 aa		12.8	□□□□□ -0.36
GGA1-218	ENST00000475445	CDCP1	Q9H5V8	836 aa		12.8	□□□□□ -0.36
GGA1-218	ENST00000475445	KLRF1	Q9NZS2	232 aa		12.8	□□□□□ -0.36
GGA1-218	ENST00000475445	ZNF107	Q9UII5	783 aa	Predicted RBP	12.8	□□□□□ -0.36
GGA1-218	ENST00000475445	MC2R	Q01718	297 aa		12.79	□□□□□ -0.36
GGA1-218	ENST00000475445	COTL1	Q14019	142 aa		12.79	□□□□□ -0.36
GGA1-218	ENST00000475445	CSRP2	Q16527	193 aa		12.79	□□□□□ -0.36
GGA1-218	ENST00000475445	CCDC157	Q569K6	752 aa		12.79	□□□□□ -0.36
GGA1-218	ENST00000475445	FAM74A1	Q5RGS3	127 aa		12.79	□□□□□ -0.36
GGA1-218	ENST00000475445	STEAP1B	Q6NZ63	245 aa		12.79	□□□□□ -0.36
GGA1-218	ENST00000475445	CPEB2	Q7Z5Q1	589 aa	Known RBP	12.79	□□□□□ -0.36
GGA1-218	ENST00000475445	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	12.79	□□□□□ -0.36
GGA1-218	ENST00000475445	OR10H5	Q8NGA6	315 aa		12.79	□□□□□ -0.36
GGA1-218	ENST00000475445	GHRL	Q9UBU3	117 aa		12.79	□□□□□ -0.36
GGA1-218	ENST00000475445	MUC3A	Q02505	3323 aa		12.79	□□□□□ -0.36
GGA1-218	ENST00000475445	PLSCR5	A0PG75	271 aa		12.79	□□□□□ -0.36
GGA1-218	ENST00000475445	ZFAND5	O76080	213 aa		12.79	□□□□□ -0.36
GGA1-218	ENST00000475445	TIAF1	O95411	115 aa		12.79	□□□□□ -0.36
GGA1-218	ENST00000475445	DCN	P07585	359 aa	Known RBP	12.79	□□□□□ -0.36
GGA1-218	ENST00000475445	MUC1	P15941	1255 aa	Predicted RBP	12.79	□□□□□ -0.36
GGA1-218	ENST00000475445	EPHA8	P29322	1005 aa	Predicted RBP	12.79	□□□□□ -0.36
GGA1-218	ENST00000475445	LINC00346	Q8IVM7	164 aa		12.79	□□□□□ -0.36
GGA1-218	ENST00000475445	PDZD9	Q8IXQ8	264 aa		12.79	□□□□□ -0.36
GGA1-218	ENST00000475445	RELT	Q969Z4	430 aa		12.79	□□□□□ -0.36
GGA1-218	ENST00000475445	SERINC1	Q9NRX5	453 aa		12.79	□□□□□ -0.36
GGA1-218	ENST00000475445	MED29	Q9NX70	200 aa		12.79	□□□□□ -0.36
GGA1-218	ENST00000475445	UPB1	Q9UBR1	384 aa		12.79	□□□□□ -0.36
GGA1-218	ENST00000475445	MRPS18B	Q9Y676	258 aa	Known RBP	12.79	□□□□□ -0.36
GGA1-218	ENST00000475445	IGKV1D-43	A0A0B4J1Z2	117 aa		12.78	□□□□□ -0.36
GGA1-218	ENST00000475445	RLN1	P04808	185 aa		12.78	□□□□□ -0.36
GGA1-218	ENST00000475445	GP1BA	P07359	652 aa		12.78	□□□□□ -0.36
GGA1-218	ENST00000475445	CYC1	P08574	325 aa		12.78	□□□□□ -0.36
GGA1-218	ENST00000475445	RAB6A	P20340	208 aa		12.78	□□□□□ -0.36
GGA1-218	ENST00000475445	PLPPR5	Q32ZL2	321 aa		12.78	□□□□□ -0.36
GGA1-218	ENST00000475445	ZNF385C	Q66K41	422 aa	Predicted RBP	12.78	□□□□□ -0.36
GGA1-218	ENST00000475445	LYPD6	Q86Y78	171 aa		12.78	□□□□□ -0.36
GGA1-218	ENST00000475445	GABRG1	Q8N1C3	465 aa		12.78	□□□□□ -0.36
GGA1-218	ENST00000475445	OR51S1	Q8NGJ8	323 aa		12.78	□□□□□ -0.36
GGA1-218	ENST00000475445	ASB13	Q8WXK3	278 aa		12.78	□□□□□ -0.36
GGA1-218	ENST00000475445	SEH1L	Q96EE3	360 aa		12.78	□□□□□ -0.36
GGA1-218	ENST00000475445	NECAB3	Q96P71	396 aa	Predicted RBP	12.78	□□□□□ -0.36
GGA1-218	ENST00000475445	MESP1	Q9BRJ9	268 aa		12.78	□□□□□ -0.36
GGA1-218	ENST00000475445	APMAP	Q9HDC9	416 aa		12.78	□□□□□ -0.36
GGA1-218	ENST00000475445	C19orf25	Q9UFG5	118 aa	Predicted RBP	12.78	□□□□□ -0.36
GGA1-218	ENST00000475445	CGGBP1	Q9UFW8	167 aa	Predicted RBP	12.78	□□□□□ -0.36
GGA1-218	ENST00000475445	TMEM238L	A0A1B0GVL6	79 aa		12.78	□□□□□ -0.36
GGA1-218	ENST00000475445	C5orf52	A6NGY3	159 aa		12.78	□□□□□ -0.36
GGA1-218	ENST00000475445	DOK2	O60496	412 aa		12.78	□□□□□ -0.36
GGA1-218	ENST00000475445	LY86	O95711	162 aa		12.78	□□□□□ -0.36
GGA1-218	ENST00000475445	CD3D	P04234	171 aa		12.78	□□□□□ -0.36
GGA1-218	ENST00000475445	CRYBA1	P05813	215 aa		12.78	□□□□□ -0.36
GGA1-218	ENST00000475445	BID	P55957	195 aa		12.78	□□□□□ -0.36
GGA1-218	ENST00000475445	GUSBP11	Q6P575	273 aa		12.78	□□□□□ -0.36
GGA1-218	ENST00000475445	WDFY1	Q8IWB7	410 aa		12.78	□□□□□ -0.36
GGA1-218	ENST00000475445	OR51A2	Q8NGJ7	313 aa		12.78	□□□□□ -0.36
GGA1-218	ENST00000475445	WIF1	Q9Y5W5	379 aa		12.78	□□□□□ -0.36
GGA1-218	ENST00000475445	CPED1	A4D0V7	1026 aa		12.77	□□□□□ -0.36
GGA1-218	ENST00000475445	PRSS47	A8MTI9	375 aa		12.77	□□□□□ -0.36
GGA1-218	ENST00000475445	RGS11	O94810	467 aa		12.77	□□□□□ -0.36
GGA1-218	ENST00000475445	EDN3	P14138	238 aa		12.77	□□□□□ -0.36
GGA1-218	ENST00000475445	PTGDS	P41222	190 aa		12.77	□□□□□ -0.36
GGA1-218	ENST00000475445	SPOCK1	Q08629	439 aa		12.77	□□□□□ -0.36
GGA1-218	ENST00000475445	MPPED2	Q15777	294 aa		12.77	□□□□□ -0.36
GGA1-218	ENST00000475445	KLHL24	Q6TFL4	600 aa		12.77	□□□□□ -0.36
GGA1-218	ENST00000475445	TMEM205	Q6UW68	189 aa		12.77	□□□□□ -0.36
GGA1-218	ENST00000475445	NHLRC1	Q6VVB1	395 aa		12.77	□□□□□ -0.36
GGA1-218	ENST00000475445	ZNF627	Q7L945	461 aa		12.77	□□□□□ -0.36
GGA1-218	ENST00000475445	JAGN1	Q8N5M9	183 aa		12.77	□□□□□ -0.36
GGA1-218	ENST00000475445	OR52B4	Q8NGK2	314 aa		12.77	□□□□□ -0.36
GGA1-218	ENST00000475445	C11orf40	Q8WZ69	217 aa		12.77	□□□□□ -0.36
GGA1-218	ENST00000475445	C14orf144	Q96I85	54 aa		12.77	□□□□□ -0.36
GGA1-218	ENST00000475445	OPA3	Q9H6K4	179 aa		12.77	□□□□□ -0.36
GGA1-218	ENST00000475445	CENPM	Q9NSP4	180 aa		12.77	□□□□□ -0.36
GGA1-218	ENST00000475445	FAM206A	Q9NX38	181 aa		12.77	□□□□□ -0.36
GGA1-218	ENST00000475445	MYOT	Q9UBF9	498 aa		12.77	□□□□□ -0.36
GGA1-218	ENST00000475445	B3GALT1	Q9Y5Z6	326 aa		12.77	□□□□□ -0.36
GGA1-218	ENST00000475445		A0A1B0GW55	424 aa		12.77	□□□□□ -0.37
GGA1-218	ENST00000475445	C9orf170	A2RU37	121 aa		12.77	□□□□□ -0.37
GGA1-218	ENST00000475445	DCDC2B	A2VCK2	349 aa		12.77	□□□□□ -0.37
GGA1-218	ENST00000475445	C19orf67	A6NJJ6	358 aa		12.77	□□□□□ -0.37
GGA1-218	ENST00000475445		H3BML4	177 aa		12.77	□□□□□ -0.37
GGA1-218	ENST00000475445	ITGB2	P05107	769 aa		12.77	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms