RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 HIST2H2BEQ16778 126 aa8.53□□□□□ -1.04
NHLRC3-203ENST00000470258 TCTN1Q2MV58 587 aa8.53□□□□□ -1.04
NHLRC3-203ENST00000470258 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.53□□□□□ -1.04
NHLRC3-203ENST00000470258 VN1R4Q7Z5H5 301 aa8.53□□□□□ -1.04
NHLRC3-203ENST00000470258 DEFB128Q7Z7B8 93 aa8.53□□□□□ -1.04
NHLRC3-203ENST00000470258 ZNF101Q8IZC7 436 aa8.53□□□□□ -1.04
NHLRC3-203ENST00000470258 FAM213BQ8TBF2 198 aa8.53□□□□□ -1.04
NHLRC3-203ENST00000470258 HIST1H2BHQ93079 126 aa8.53□□□□□ -1.04
NHLRC3-203ENST00000470258 MALSU1Q96EH3 234 aa8.53□□□□□ -1.04
NHLRC3-203ENST00000470258 BSCL2Q96G97 398 aaPredicted RBP8.53□□□□□ -1.04
NHLRC3-203ENST00000470258 CYYR1Q96J86 154 aa8.53□□□□□ -1.04
NHLRC3-203ENST00000470258 C2orf50Q96LR7 162 aa8.53□□□□□ -1.04
NHLRC3-203ENST00000470258 SPACA5Q96QH8 159 aa8.53□□□□□ -1.04
NHLRC3-203ENST00000470258 HIST1H2BNQ99877 126 aa8.53□□□□□ -1.04
NHLRC3-203ENST00000470258 HIST1H2BMQ99879 126 aa8.53□□□□□ -1.04
NHLRC3-203ENST00000470258 C5orf66Q9H5L9 145 aa8.53□□□□□ -1.04
NHLRC3-203ENST00000470258 UCK1Q9HA47 277 aa8.53□□□□□ -1.04
NHLRC3-203ENST00000470258 EMC9Q9Y3B6 208 aa8.53□□□□□ -1.04
NHLRC3-203ENST00000470258 TGIF2-C20orf24A0A0A6YYL0 155 aa8.52□□□□□ -1.05
NHLRC3-203ENST00000470258 RAB27BO00194 218 aa8.52□□□□□ -1.05
NHLRC3-203ENST00000470258 JTBO76095 146 aa8.52□□□□□ -1.05
NHLRC3-203ENST00000470258 SOD2P04179 222 aa8.52□□□□□ -1.05
NHLRC3-203ENST00000470258 CXCL1P09341 107 aa8.52□□□□□ -1.05
NHLRC3-203ENST00000470258 COX5BP10606 129 aa8.52□□□□□ -1.05
NHLRC3-203ENST00000470258 GJA4P35212 333 aa8.52□□□□□ -1.05
NHLRC3-203ENST00000470258 IGFALSP35858 605 aa8.52□□□□□ -1.05
NHLRC3-203ENST00000470258 SRSF5Q13243 272 aaKnown RBP8.52□□□□□ -1.05
NHLRC3-203ENST00000470258 SLC17A1Q14916 467 aa8.52□□□□□ -1.05
NHLRC3-203ENST00000470258 FAM166AQ6J272 317 aa8.52□□□□□ -1.05
NHLRC3-203ENST00000470258 FAHD2BQ6P2I3 314 aaPredicted RBP8.52□□□□□ -1.05
NHLRC3-203ENST00000470258 ANGPTL5Q86XS5 388 aa8.52□□□□□ -1.05
NHLRC3-203ENST00000470258 TCEAL8Q8IYN2 117 aa8.52□□□□□ -1.05
NHLRC3-203ENST00000470258 MFSD9Q8NBP5 474 aa8.52□□□□□ -1.05
NHLRC3-203ENST00000470258 TMEM52Q8NDY8 209 aa8.52□□□□□ -1.05
NHLRC3-203ENST00000470258 TERB2Q8NHR7 220 aa8.52□□□□□ -1.05
NHLRC3-203ENST00000470258 NTNG2Q96CW9 530 aa8.52□□□□□ -1.05
NHLRC3-203ENST00000470258 FAHD2AQ96GK7 314 aa8.52□□□□□ -1.05
NHLRC3-203ENST00000470258 ASB16Q96NS5 453 aa8.52□□□□□ -1.05
NHLRC3-203ENST00000470258 RARRES2Q99969 163 aa8.52□□□□□ -1.05
NHLRC3-203ENST00000470258 RAB18Q9NP72 206 aa8.52□□□□□ -1.05
NHLRC3-203ENST00000470258 LUZP4Q9P127 313 aa8.52□□□□□ -1.05
NHLRC3-203ENST00000470258 RCL1Q9Y2P8 373 aaKnown RBP8.52□□□□□ -1.05
NHLRC3-203ENST00000470258 MKI67P46013 3256 aaKnown RBP8.52□□□□□ -1.05
NHLRC3-203ENST00000470258 A0A087WUJ7 227 aa8.52□□□□□ -1.05
NHLRC3-203ENST00000470258 A0A087WZY1 265 aa8.52□□□□□ -1.05
NHLRC3-203ENST00000470258 A0A0A6YYH2 397 aa8.52□□□□□ -1.05
NHLRC3-203ENST00000470258 LOC390937A0A1W2PQ73 354 aa8.52□□□□□ -1.05
NHLRC3-203ENST00000470258 SMCO3A2RU48 225 aa8.52□□□□□ -1.05
NHLRC3-203ENST00000470258 WIPF3A6NGB9 483 aa8.52□□□□□ -1.05
NHLRC3-203ENST00000470258 A6NJ64 397 aa8.52□□□□□ -1.05
NHLRC3-203ENST00000470258 TAAR5O14804 337 aa8.52□□□□□ -1.05
NHLRC3-203ENST00000470258 SFT2D2O95562 160 aa8.52□□□□□ -1.05
NHLRC3-203ENST00000470258 IGKV1D-16P01601 117 aa8.52□□□□□ -1.05
NHLRC3-203ENST00000470258 KLK2P20151 261 aa8.52□□□□□ -1.05
NHLRC3-203ENST00000470258 C5AR1P21730 350 aa8.52□□□□□ -1.05
NHLRC3-203ENST00000470258 GLRA1P23415 457 aa8.52□□□□□ -1.05
NHLRC3-203ENST00000470258 UBE2KP61086 200 aa8.52□□□□□ -1.05
NHLRC3-203ENST00000470258 MESP2Q0VG99 397 aa8.52□□□□□ -1.05
NHLRC3-203ENST00000470258 ZNF260Q3ZCT1 412 aa8.52□□□□□ -1.05
NHLRC3-203ENST00000470258 MESTQ5EB52 335 aa8.52□□□□□ -1.05
NHLRC3-203ENST00000470258 TCEAL6Q6IPX3 200 aa8.52□□□□□ -1.05
NHLRC3-203ENST00000470258 APCDD1LQ8NCL9 501 aa8.52□□□□□ -1.05
NHLRC3-203ENST00000470258 PACRGQ96M98 296 aaPredicted RBP8.52□□□□□ -1.05
NHLRC3-203ENST00000470258 OR11A1Q9GZK7 315 aa8.52□□□□□ -1.05
NHLRC3-203ENST00000470258 UBQLN4Q9NRR5 601 aa8.52□□□□□ -1.05
NHLRC3-203ENST00000470258 MEMO1Q9Y316 297 aa8.52□□□□□ -1.05
NHLRC3-203ENST00000470258 STARD10Q9Y365 291 aa8.52□□□□□ -1.05
NHLRC3-203ENST00000470258 TMEM184BQ9Y519 407 aaPredicted RBP8.52□□□□□ -1.05
NHLRC3-203ENST00000470258 XKRYO14609 159 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 HOXA2O43364 376 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 RNH1P13489 461 aaKnown RBP8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 S1PR1P21453 382 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 PEBP1P30086 187 aaKnown RBP8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 PPP1CCP36873 323 aaKnown RBP8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 CCR2P41597 374 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 EGR3Q06889 387 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 DHCR24Q15392 516 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 ZNHIT3Q15649 155 aaPredicted RBP8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 UBE2V2Q15819 145 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 FAM78AQ5JUQ0 283 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 PNLDC1Q8NA58 520 aaKnown RBP8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 OR10AD1Q8NGE0 317 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 OR2L8Q8NGY9 312 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 Q8WTZ3 238 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 AQP3Q92482 292 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 TMEM230Q96A57 120 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 PBDC1Q9BVG4 233 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 SLC26A1Q9H2B4 701 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 PTGES2Q9H7Z7 377 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 CNTD2Q9H8S5 307 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 DNAJB11Q9UBS4 358 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 DAPP1Q9UN19 280 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 DOCK9Q9BZ29 2069 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 KIAA1549LQ6ZVL6 1849 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 ATXN7O15265 892 aaPredicted RBP8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 HEXBP07686 556 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 SELPP16109 830 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 MDKP21741 143 aaPredicted RBP8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 OR3A2P47893 321 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms