RNA–Protein interactions for RNA: ENST00000468371.5

SHQ1-205, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 1 (best)

Gene SHQ1, Length 4,024 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-205ENST00000468371 RNF170Q96K19 258 aa5.34□□□□□ -1.55
SHQ1-205ENST00000468371 PTDSS2Q9BVG9 487 aa5.34□□□□□ -1.55
SHQ1-205ENST00000468371 HCAR1Q9BXC0 346 aa5.34□□□□□ -1.55
SHQ1-205ENST00000468371 ENKD1Q9H0I2 346 aa5.34□□□□□ -1.55
SHQ1-205ENST00000468371 PIGMQ9H3S5 423 aa5.34□□□□□ -1.55
SHQ1-205ENST00000468371 ESRP2Q9H6T0 727 aaKnown RBP5.34□□□□□ -1.55
SHQ1-205ENST00000468371 PPP1R3EQ9H7J1 279 aa5.34□□□□□ -1.55
SHQ1-205ENST00000468371 CHMP1AQ9HD42 196 aaPredicted RBP5.34□□□□□ -1.55
SHQ1-205ENST00000468371 NRIP3Q9NQ35 241 aa5.34□□□□□ -1.55
SHQ1-205ENST00000468371 ADAM18Q9Y3Q7 739 aa5.34□□□□□ -1.55
SHQ1-205ENST00000468371 FER1L5A0AVI2 2057 aa5.34□□□□□ -1.56
SHQ1-205ENST00000468371 PTPRBP23467 1997 aa5.34□□□□□ -1.56
SHQ1-205ENST00000468371 LOC105371267A0A1B0GV96 52 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 OR2M5A3KFT3 312 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 METTL21EPA6NDL7 271 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 OR2T1O43869 369 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 CBX7O95931 251 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 HLA-AP01891 365 aaKnown RBP5.33□□□□□ -1.56
SHQ1-205ENST00000468371 RD3LP0DJH9 198 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 AGTR1P30556 359 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 FRKP42685 505 aaPredicted RBP5.33□□□□□ -1.56
SHQ1-205ENST00000468371 PCBP3P57721 371 aaKnown RBP5.33□□□□□ -1.56
SHQ1-205ENST00000468371 SLC35A1P78382 337 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 POU4F2Q12837 409 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 SNTB1Q13884 538 aaKnown RBP5.33□□□□□ -1.56
SHQ1-205ENST00000468371 MFSD13AQ14CX5 517 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 RNPS1Q15287 305 aaKnown RBP5.33□□□□□ -1.56
SHQ1-205ENST00000468371 RAB11BQ15907 218 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 TUSC1Q2TAM9 212 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 NIPAL3Q6P499 406 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 IGFL2Q6UWQ7 119 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 TSEN54Q7Z6J9 526 aaKnown RBP5.33□□□□□ -1.56
SHQ1-205ENST00000468371 RNASE6Q93091 150 aaKnown RBP5.33□□□□□ -1.56
SHQ1-205ENST00000468371 TIMP4Q99727 224 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 BCL2L14Q9BZR8 327 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 CST11Q9H112 138 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 GLRX2Q9NS18 164 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 KLF2Q9Y5W3 355 aaPredicted RBP5.33□□□□□ -1.56
SHQ1-205ENST00000468371 A0A0B4J2A0 478 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 TNFSF11O14788 317 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 ATG12O94817 140 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 WNT11O96014 354 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 CD3EP07766 207 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 CDK2P24941 298 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 PTBP1P26599 531 aaKnown RBP eCLIP5.33□□□□□ -1.565e-15■■■■■ 45.9
SHQ1-205ENST00000468371 EMDP50402 254 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 RAB5BP61020 215 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 CDK5Q00535 292 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 GTF3C1Q12789 2109 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 GSG1Q2KHT4 349 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 GPR139Q6DWJ6 353 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 TMEM65Q6PI78 240 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 SLC35D2Q76EJ3 337 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 LINC01560Q8TB33 94 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 NANOS1Q8WY41 292 aaKnown RBP5.33□□□□□ -1.56
SHQ1-205ENST00000468371 ROBO4Q8WZ75 1007 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 TMEM106AQ96A25 262 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 SCMH1Q96GD3 660 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 C12orf57Q99622 126 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 VRK1Q99986 396 aaPredicted RBP5.33□□□□□ -1.56
SHQ1-205ENST00000468371 SFXN3Q9BWM7 321 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 SHPKQ9UHJ6 478 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 DHDHQ9UQ10 334 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 LSM2Q9Y333 95 aaKnown RBP5.33□□□□□ -1.56
SHQ1-205ENST00000468371 SPTBN5Q9NRC6 3674 aaKnown RBP5.33□□□□□ -1.56
SHQ1-205ENST00000468371 A0A1W2PS29 197 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 ARRDC5A6NEK1 342 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 C4orf51C9J302 202 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 SMPD2O60906 423 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 EPPINO95925 133 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 CELA3AP09093 270 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 AKAIN1P0CW23 69 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 RAC1P63000 192 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 ZNF616Q08AN1 781 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 RBMS2Q15434 407 aaKnown RBP5.33□□□□□ -1.56
SHQ1-205ENST00000468371 OR7A5Q15622 319 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 RIPPLY2Q5TAB7 128 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 HACD4Q5VWC8 232 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 GLT8D1Q68CQ7 371 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 H3F3CQ6NXT2 135 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 RHOUQ7L0Q8 258 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 OR10R2Q8NGX6 335 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 RASD2Q96D21 266 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 MRGPRX4Q96LA9 322 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 TSSK2Q96PF2 358 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 ZNF703Q9H7S9 590 aaPredicted RBP5.33□□□□□ -1.56
SHQ1-205ENST00000468371 MED17Q9NVC6 651 aa5.33□□□□□ -1.56
SHQ1-205ENST00000468371 ANKHD1Q8IWZ3 2542 aaKnown RBP5.33□□□□□ -1.56
SHQ1-205ENST00000468371 MEIKINA0A087WXM9 373 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 ZNF736B4DX44 427 aaPredicted RBP5.32□□□□□ -1.56
SHQ1-205ENST00000468371 SEMG1P04279 462 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 IGKV3-11P04433 115 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 RRASP10301 218 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 EPXP11678 715 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 RAB3AP20336 220 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 DUSP2Q05923 314 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 SPOCK1Q08629 439 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 RPL22L1Q6P5R6 122 aaKnown RBP5.32□□□□□ -1.56
SHQ1-205ENST00000468371 VHLLQ6RSH7 139 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 DGAT2L6Q6ZPD8 337 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms