RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 PLEK2Q9NYT0 353 aa15.33■□□□□ 0.04
SMC6-206ENST00000446852 PRRC2CQ9Y520 2896 aaKnown RBP15.32■□□□□ 0.04
SMC6-206ENST00000446852 NME2P1O60361 137 aa15.32■□□□□ 0.04
SMC6-206ENST00000446852 SP1P08047 785 aa15.32■□□□□ 0.04
SMC6-206ENST00000446852 H2AFB2P0C5Z0 115 aa15.32■□□□□ 0.04
SMC6-206ENST00000446852 GSTT2BP0CG30 244 aa15.32■□□□□ 0.04
SMC6-206ENST00000446852 B4GALT1P15291 398 aa15.32■□□□□ 0.04
SMC6-206ENST00000446852 NME2P22392 152 aa15.32■□□□□ 0.04
SMC6-206ENST00000446852 SLC6A9P48067 706 aa15.32■□□□□ 0.04
SMC6-206ENST00000446852 TCF15Q12870 199 aa15.32■□□□□ 0.04
SMC6-206ENST00000446852 MOGAT2Q3SYC2 334 aa15.32■□□□□ 0.04
SMC6-206ENST00000446852 DOK3Q7L591 496 aa15.32■□□□□ 0.04
SMC6-206ENST00000446852 SLC22A24Q8N4F4 322 aa15.32■□□□□ 0.04
SMC6-206ENST00000446852 CPT1CQ8TCG5 803 aa15.32■□□□□ 0.04
SMC6-206ENST00000446852 SPACA5Q96QH8 159 aa15.32■□□□□ 0.04
SMC6-206ENST00000446852 MEIS3P1A6NDR6 274 aa15.32■□□□□ 0.04
SMC6-206ENST00000446852 NAP1L6A6NFF2 107 aa15.32■□□□□ 0.04
SMC6-206ENST00000446852 LRP3O75074 770 aa15.32■□□□□ 0.04
SMC6-206ENST00000446852 ZNF708P17019 499 aa15.32■□□□□ 0.04
SMC6-206ENST00000446852 MEOX1P50221 254 aa15.32■□□□□ 0.04
SMC6-206ENST00000446852 PDSS1Q5T2R2 415 aa15.32■□□□□ 0.04
SMC6-206ENST00000446852 VASH2Q86V25 355 aa15.32■□□□□ 0.04
SMC6-206ENST00000446852 OR14K1Q8NGZ2 314 aa15.32■□□□□ 0.04
SMC6-206ENST00000446852 ITFG2Q969R8 447 aa15.32■□□□□ 0.04
SMC6-206ENST00000446852 ZNF486Q96H40 463 aaPredicted RBP15.32■□□□□ 0.04
SMC6-206ENST00000446852 RNF170Q96K19 258 aa15.32■□□□□ 0.04
SMC6-206ENST00000446852 RBBP9O75884 186 aa15.31■□□□□ 0.04
SMC6-206ENST00000446852 ITGB2P05107 769 aa15.31■□□□□ 0.04
SMC6-206ENST00000446852 PLGLB1Q02325 96 aa15.31■□□□□ 0.04
SMC6-206ENST00000446852 SRSF6Q13247 344 aaKnown RBP15.31■□□□□ 0.04
SMC6-206ENST00000446852 UNC119Q13432 240 aa15.31■□□□□ 0.04
SMC6-206ENST00000446852 RSPO4Q2I0M5 234 aaPredicted RBP15.31■□□□□ 0.04
SMC6-206ENST00000446852 GSG1Q2KHT4 349 aa15.31■□□□□ 0.04
SMC6-206ENST00000446852 HYAL4Q2M3T9 481 aa15.31■□□□□ 0.04
SMC6-206ENST00000446852 PCGF3Q3KNV8 242 aa15.31■□□□□ 0.04
SMC6-206ENST00000446852 SLC25A25Q6KCM7 469 aa15.31■□□□□ 0.04
SMC6-206ENST00000446852 ZNF627Q7L945 461 aa15.31■□□□□ 0.04
SMC6-206ENST00000446852 PAQR4Q8N4S7 273 aaPredicted RBP15.31■□□□□ 0.04
SMC6-206ENST00000446852 PTX4Q96A99 478 aa15.31■□□□□ 0.04
SMC6-206ENST00000446852 UQCC2Q9BRT2 126 aa15.31■□□□□ 0.04
SMC6-206ENST00000446852 TP63Q9H3D4 680 aaPredicted RBP15.31■□□□□ 0.04
SMC6-206ENST00000446852 ASCL3Q9NQ33 180 aa15.31■□□□□ 0.04
SMC6-206ENST00000446852 NKIRAS2Q9NYR9 191 aa15.31■□□□□ 0.04
SMC6-206ENST00000446852 FLVCR2Q9UPI3 526 aa15.31■□□□□ 0.04
SMC6-206ENST00000446852 M0R135 149 aa15.31■□□□□ 0.04
SMC6-206ENST00000446852 PSMB1P20618 241 aaKnown RBP15.31■□□□□ 0.04
SMC6-206ENST00000446852 CD82P27701 267 aa15.31■□□□□ 0.04
SMC6-206ENST00000446852 PRSS3P35030 304 aa15.31■□□□□ 0.04
SMC6-206ENST00000446852 QRFPP83859 136 aa15.31■□□□□ 0.04
SMC6-206ENST00000446852 PMPCAQ10713 525 aa15.31■□□□□ 0.04
SMC6-206ENST00000446852 CEACAM16Q2WEN9 425 aa15.31■□□□□ 0.04
SMC6-206ENST00000446852 TCTE3Q8IZS6 198 aa15.31■□□□□ 0.04
SMC6-206ENST00000446852 OR56B4Q8NH76 319 aa15.31■□□□□ 0.04
SMC6-206ENST00000446852 GIMAP1Q8WWP7 306 aa15.31■□□□□ 0.04
SMC6-206ENST00000446852 ZNF799Q96GE5 643 aa15.31■□□□□ 0.04
SMC6-206ENST00000446852 MOV10Q9HCE1 1003 aaKnown RBP15.31■□□□□ 0.04
SMC6-206ENST00000446852 KLF13Q9Y2Y9 288 aaPredicted RBP15.31■□□□□ 0.04
SMC6-206ENST00000446852 CST2P09228 141 aa15.3■□□□□ 0.04
SMC6-206ENST00000446852 ZNF93P35789 620 aaPredicted RBP15.3■□□□□ 0.04
SMC6-206ENST00000446852 RAG2P55895 527 aa15.3■□□□□ 0.04
SMC6-206ENST00000446852 RIPPLY2Q5TAB7 128 aa15.3■□□□□ 0.04
SMC6-206ENST00000446852 GPR35Q9HC97 309 aa15.3■□□□□ 0.04
SMC6-206ENST00000446852 ELF5Q9UKW6 265 aaPredicted RBP15.3■□□□□ 0.04
SMC6-206ENST00000446852 IGKV3D-15A0A087WSY6 115 aa15.29■□□□□ 0.04
SMC6-206ENST00000446852 A0A0U1RQV5 110 aa15.29■□□□□ 0.04
SMC6-206ENST00000446852 SGCEO43556 437 aa15.29■□□□□ 0.04
SMC6-206ENST00000446852 PATE4P0C8F1 98 aa15.29■□□□□ 0.04
SMC6-206ENST00000446852 RAB6AP20340 208 aa15.29■□□□□ 0.04
SMC6-206ENST00000446852 CRYGSP22914 178 aa15.29■□□□□ 0.04
SMC6-206ENST00000446852 RAB35Q15286 201 aa15.29■□□□□ 0.04
SMC6-206ENST00000446852 FCN2Q15485 313 aa15.29■□□□□ 0.04
SMC6-206ENST00000446852 LINC00303Q3SY05 128 aa15.29■□□□□ 0.04
SMC6-206ENST00000446852 ZNF774Q6NX45 483 aa15.29■□□□□ 0.04
SMC6-206ENST00000446852 PGAP1Q75T13 922 aa15.29■□□□□ 0.04
SMC6-206ENST00000446852 GPX8Q8TED1 209 aa15.29■□□□□ 0.04
SMC6-206ENST00000446852 FAM46BQ96A09 425 aa15.29■□□□□ 0.04
SMC6-206ENST00000446852 TMEM45BQ96B21 275 aa15.29■□□□□ 0.04
SMC6-206ENST00000446852 FOXB1Q99853 325 aa15.29■□□□□ 0.04
SMC6-206ENST00000446852 ZMAT3Q9HA38 289 aaKnown RBP15.29■□□□□ 0.04
SMC6-206ENST00000446852 BEX1Q9HBH7 125 aa15.29■□□□□ 0.04
SMC6-206ENST00000446852 FAM86C1Q9NVL1 165 aa15.29■□□□□ 0.04
SMC6-206ENST00000446852 IGKV1-9A0A0C4DH69 117 aa15.29■□□□□ 0.04
SMC6-206ENST00000446852 WIPF3A6NGB9 483 aa15.29■□□□□ 0.04
SMC6-206ENST00000446852 SYNGR3O43761 229 aa15.29■□□□□ 0.04
SMC6-206ENST00000446852 BPNT1O95861 308 aa15.29■□□□□ 0.04
SMC6-206ENST00000446852 IGHV3-9P01782 118 aa15.29■□□□□ 0.04
SMC6-206ENST00000446852 FCER2P06734 321 aa15.29■□□□□ 0.04
SMC6-206ENST00000446852 ERCC1P07992 297 aaPredicted RBP15.29■□□□□ 0.04
SMC6-206ENST00000446852 VSIG8P0DPA2 414 aa15.29■□□□□ 0.04
SMC6-206ENST00000446852 DMRTC1Q5HYR2 192 aa15.29■□□□□ 0.04
SMC6-206ENST00000446852 SFRP5Q5T4F7 317 aa15.29■□□□□ 0.04
SMC6-206ENST00000446852 ACBD4Q8NC06 268 aa15.29■□□□□ 0.04
SMC6-206ENST00000446852 BEST4Q8NFU0 473 aa15.29■□□□□ 0.04
SMC6-206ENST00000446852 OR4D10Q8NGI6 311 aa15.29■□□□□ 0.04
SMC6-206ENST00000446852 SEH1LQ96EE3 360 aa15.29■□□□□ 0.04
SMC6-206ENST00000446852 PAIP2BQ9ULR5 123 aaKnown RBP15.29■□□□□ 0.04
SMC6-206ENST00000446852 FAM186AA6NE01 2351 aa15.29■□□□□ 0.04
SMC6-206ENST00000446852 RIF1Q5UIP0 2472 aaKnown RBP15.29■□□□□ 0.04
SMC6-206ENST00000446852 PRR33A8MZF0 331 aa15.28■□□□□ 0.04
SMC6-206ENST00000446852 ZNF32P17041 273 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms