RNA–Protein interactions for RNA: ENST00000409080.5

ITGA6-202, Transcript of integrin subunit alpha 6, humanhuman

TSL 2 BASIC

Gene ITGA6, Length 5,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-202ENST00000409080 ATPAF1Q5TC12 328 aaPredicted RBP12.7□□□□□ -0.38
ITGA6-202ENST00000409080 AMER3Q8N944 861 aa12.7□□□□□ -0.38
ITGA6-202ENST00000409080 SLC35E1Q96K37 410 aa12.7□□□□□ -0.38
ITGA6-202ENST00000409080 PTBP1P26599 531 aaKnown RBP eCLIP12.7□□□□□ -0.38
ITGA6-202ENST00000409080 ALKBH6Q3KRA9 238 aa12.7□□□□□ -0.38
ITGA6-202ENST00000409080 SHEQ5VZ18 495 aa12.7□□□□□ -0.38
ITGA6-202ENST00000409080 HEPHL1Q6MZM0 1159 aa12.7□□□□□ -0.38
ITGA6-202ENST00000409080 SMIM15Q7Z3B0 74 aa12.7□□□□□ -0.38
ITGA6-202ENST00000409080 ZNF441Q8N8Z8 693 aa12.7□□□□□ -0.38
ITGA6-202ENST00000409080 ARL11Q969Q4 196 aa12.7□□□□□ -0.38
ITGA6-202ENST00000409080 IKZF5Q9H5V7 419 aa12.7□□□□□ -0.38
ITGA6-202ENST00000409080 DLL4Q9NR61 685 aa12.7□□□□□ -0.38
ITGA6-202ENST00000409080 TAS2R16Q9NYV7 291 aa12.7□□□□□ -0.38
ITGA6-202ENST00000409080 LAMP3Q9UQV4 416 aa12.7□□□□□ -0.38
ITGA6-202ENST00000409080 MAP1BP46821 2468 aaKnown RBP12.7□□□□□ -0.38
ITGA6-202ENST00000409080 A0A1B0GTL3 188 aa12.69□□□□□ -0.38
ITGA6-202ENST00000409080 CEACAM1P13688 526 aa12.69□□□□□ -0.38
ITGA6-202ENST00000409080 ZNF26P17031 533 aaPredicted RBP12.69□□□□□ -0.38
ITGA6-202ENST00000409080 HNF1AP20823 631 aa12.69□□□□□ -0.38
ITGA6-202ENST00000409080 C17orf47Q8NEP4 570 aa12.69□□□□□ -0.38
ITGA6-202ENST00000409080 TM4SF19Q96DZ7 209 aa12.69□□□□□ -0.38
ITGA6-202ENST00000409080 SMIM19Q96E16 107 aa12.69□□□□□ -0.38
ITGA6-202ENST00000409080 K7EPK0 472 aa12.69□□□□□ -0.38
ITGA6-202ENST00000409080 CDAP32320 146 aa12.69□□□□□ -0.38
ITGA6-202ENST00000409080 C21orf58P58505 322 aa12.69□□□□□ -0.38
ITGA6-202ENST00000409080 RPS16P62249 146 aaKnown RBP12.69□□□□□ -0.38
ITGA6-202ENST00000409080 C1orf185Q5T7R7 199 aa12.69□□□□□ -0.38
ITGA6-202ENST00000409080 SLC22A18ASQ8N1D0 253 aa12.69□□□□□ -0.38
ITGA6-202ENST00000409080 OSR2Q8N2R0 312 aa12.69□□□□□ -0.38
ITGA6-202ENST00000409080 FAM71E2Q8N5Q1 922 aa12.69□□□□□ -0.38
ITGA6-202ENST00000409080 TMEM171Q8WVE6 324 aa12.69□□□□□ -0.38
ITGA6-202ENST00000409080 EML2O95834 649 aa12.69□□□□□ -0.38
ITGA6-202ENST00000409080 TBPP20226 339 aa12.69□□□□□ -0.38
ITGA6-202ENST00000409080 CASP3P42574 277 aa12.69□□□□□ -0.38
ITGA6-202ENST00000409080 ZFP36L2P47974 494 aaKnown RBP12.69□□□□□ -0.38
ITGA6-202ENST00000409080 RPL11P62913 178 aaKnown RBP12.69□□□□□ -0.38
ITGA6-202ENST00000409080 KIAA0040Q15053 153 aa12.69□□□□□ -0.38
ITGA6-202ENST00000409080 SYT6Q5T7P8 510 aaPredicted RBP12.69□□□□□ -0.38
ITGA6-202ENST00000409080 ZNF626Q68DY1 528 aa12.69□□□□□ -0.38
ITGA6-202ENST00000409080 OTOSQ8NHW6 89 aa12.69□□□□□ -0.38
ITGA6-202ENST00000409080 RBMXL1Q96E39 390 aaKnown RBP12.69□□□□□ -0.38
ITGA6-202ENST00000409080 ARSGQ96EG1 525 aa12.69□□□□□ -0.38
ITGA6-202ENST00000409080 DPCDQ9BVM2 203 aaPredicted RBP12.69□□□□□ -0.38
ITGA6-202ENST00000409080 OSGIN2Q9Y236 505 aa12.69□□□□□ -0.38
ITGA6-202ENST00000409080 WDR1O75083 606 aa12.69□□□□□ -0.38
ITGA6-202ENST00000409080 SCAF4O95104 1147 aaKnown RBP12.69□□□□□ -0.38
ITGA6-202ENST00000409080 PMP2P02689 132 aa12.69□□□□□ -0.38
ITGA6-202ENST00000409080 GNB1P62873 340 aa12.69□□□□□ -0.38
ITGA6-202ENST00000409080 GK2Q14410 553 aaPredicted RBP12.69□□□□□ -0.38
ITGA6-202ENST00000409080 HNF4GQ14541 408 aa12.69□□□□□ -0.38
ITGA6-202ENST00000409080 MRM1Q6IN84 353 aaKnown RBP12.69□□□□□ -0.38
ITGA6-202ENST00000409080 TRAT1Q6PIZ9 186 aa12.69□□□□□ -0.38
ITGA6-202ENST00000409080 BEST4Q8NFU0 473 aa12.69□□□□□ -0.38
ITGA6-202ENST00000409080 GATA6Q92908 595 aa12.69□□□□□ -0.38
ITGA6-202ENST00000409080 ONECUT1Q9UBC0 465 aa12.69□□□□□ -0.38
ITGA6-202ENST00000409080 IGHV3-64DA0A0J9YX35 117 aa12.69□□□□□ -0.38
ITGA6-202ENST00000409080 TMEM30CPA0ZSE6 113 aa12.69□□□□□ -0.38
ITGA6-202ENST00000409080 ZNF705EA8MWA4 302 aaPredicted RBP12.69□□□□□ -0.38
ITGA6-202ENST00000409080 C16orf97H3BN30 126 aa12.69□□□□□ -0.38
ITGA6-202ENST00000409080 AIPO00170 330 aa12.69□□□□□ -0.38
ITGA6-202ENST00000409080 RSPO4Q2I0M5 234 aaPredicted RBP12.69□□□□□ -0.38
ITGA6-202ENST00000409080 DEGS2Q6QHC5 323 aa12.69□□□□□ -0.38
ITGA6-202ENST00000409080 GMPPAQ96IJ6 420 aaPredicted RBP12.69□□□□□ -0.38
ITGA6-202ENST00000409080 LIN7CQ9NUP9 197 aaKnown RBP12.69□□□□□ -0.38
ITGA6-202ENST00000409080 TRPM6Q9BX84 2022 aa12.68□□□□□ -0.38
ITGA6-202ENST00000409080 A0A1W2PS29 197 aa12.68□□□□□ -0.38
ITGA6-202ENST00000409080 ZC3H12DA2A288 527 aaKnown RBP12.68□□□□□ -0.38
ITGA6-202ENST00000409080 K7EQM0 130 aa12.68□□□□□ -0.38
ITGA6-202ENST00000409080 TSPAN4O14817 238 aa12.68□□□□□ -0.38
ITGA6-202ENST00000409080 ARPC3O15145 178 aa12.68□□□□□ -0.38
ITGA6-202ENST00000409080 BAXQ07812 192 aa12.68□□□□□ -0.38
ITGA6-202ENST00000409080 PABPC1L2AQ5JQF8 200 aa12.68□□□□□ -0.38
ITGA6-202ENST00000409080 OR6X1Q8NH79 312 aa12.68□□□□□ -0.38
ITGA6-202ENST00000409080 AKR1E2Q96JD6 320 aa12.68□□□□□ -0.38
ITGA6-202ENST00000409080 CDCA4Q9BXL8 241 aa12.68□□□□□ -0.38
ITGA6-202ENST00000409080 CLEC2DQ9UHP7 191 aa12.68□□□□□ -0.38
ITGA6-202ENST00000409080 COPS3Q9UNS2 423 aa12.68□□□□□ -0.38
ITGA6-202ENST00000409080 NEU3Q9UQ49 428 aa12.68□□□□□ -0.38
ITGA6-202ENST00000409080 TRIP11Q15643 1979 aa12.68□□□□□ -0.38
ITGA6-202ENST00000409080 BMI1P35226 326 aa12.68□□□□□ -0.38
ITGA6-202ENST00000409080 RAP2BP61225 183 aa12.68□□□□□ -0.38
ITGA6-202ENST00000409080 LSAMPQ13449 338 aa12.68□□□□□ -0.38
ITGA6-202ENST00000409080 CDK5R1Q15078 307 aa12.68□□□□□ -0.38
ITGA6-202ENST00000409080 CALHM3Q86XJ0 350 aa12.68□□□□□ -0.38
ITGA6-202ENST00000409080 SLC25A45Q8N413 288 aa12.68□□□□□ -0.38
ITGA6-202ENST00000409080 TEX29Q8N6K0 151 aa12.68□□□□□ -0.38
ITGA6-202ENST00000409080 PELI1Q96FA3 418 aa12.68□□□□□ -0.38
ITGA6-202ENST00000409080 OR8B4Q96RC9 309 aa12.68□□□□□ -0.38
ITGA6-202ENST00000409080 COMMD5Q9GZQ3 224 aa12.68□□□□□ -0.38
ITGA6-202ENST00000409080 UBTD1Q9HAC8 227 aa12.68□□□□□ -0.38
ITGA6-202ENST00000409080 MN1Q10571 1320 aaPredicted RBP12.68□□□□□ -0.38
ITGA6-202ENST00000409080 AQP7P3A6NL99 342 aa12.68□□□□□ -0.38
ITGA6-202ENST00000409080 CT62P0C5K7 136 aa12.68□□□□□ -0.38
ITGA6-202ENST00000409080 ETV1P50549 477 aa12.68□□□□□ -0.38
ITGA6-202ENST00000409080 PPP1CBP62140 327 aa12.68□□□□□ -0.38
ITGA6-202ENST00000409080 LYPD4Q6UWN0 246 aa12.68□□□□□ -0.38
ITGA6-202ENST00000409080 PARP16Q8N5Y8 322 aa12.68□□□□□ -0.38
ITGA6-202ENST00000409080 OR5D13Q8NGL4 314 aa12.68□□□□□ -0.38
ITGA6-202ENST00000409080 OR10K1Q8NGX5 313 aa12.68□□□□□ -0.38
ITGA6-202ENST00000409080 MCHR2Q969V1 340 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms