RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 TBC1D28Q2M2D7 210 aa18.37■□□□□ 0.53
CPNE1-204ENST00000397443 CNPY1Q3B7I2 92 aa18.37■□□□□ 0.53
CPNE1-204ENST00000397443 SLC25A35Q3KQZ1 300 aa18.37■□□□□ 0.53
CPNE1-204ENST00000397443 C4orf17Q53FE4 359 aa18.37■□□□□ 0.53
CPNE1-204ENST00000397443 ZMAT1Q5H9K5 638 aa18.37■□□□□ 0.53
CPNE1-204ENST00000397443 GPR148Q8TDV2 347 aa18.37■□□□□ 0.53
CPNE1-204ENST00000397443 ASB5Q8WWX0 329 aa18.37■□□□□ 0.53
CPNE1-204ENST00000397443 FAM71F1Q96KD3 344 aaPredicted RBP18.37■□□□□ 0.53
CPNE1-204ENST00000397443 GPR84Q9NQS5 396 aa18.37■□□□□ 0.53
CPNE1-204ENST00000397443 SMIM30A4D0T7 59 aa18.37■□□□□ 0.53
CPNE1-204ENST00000397443 A6NIN4 97 aa18.37■□□□□ 0.53
CPNE1-204ENST00000397443 ZG16O60844 167 aa18.37■□□□□ 0.53
CPNE1-204ENST00000397443 SERPINA3P01011 423 aa18.37■□□□□ 0.53
CPNE1-204ENST00000397443 CALRP27797 417 aaKnown RBP18.37■□□□□ 0.53
CPNE1-204ENST00000397443 OBP2BQ9NPH6 170 aa18.37■□□□□ 0.53
CPNE1-204ENST00000397443 GSTK1Q9Y2Q3 226 aa18.37■□□□□ 0.53
CPNE1-204ENST00000397443 ANKRD61A6NGH8 418 aa18.36■□□□□ 0.53
CPNE1-204ENST00000397443 ZNF879B4DU55 563 aa18.36■□□□□ 0.53
CPNE1-204ENST00000397443 SYT7O43581 403 aa18.36■□□□□ 0.53
CPNE1-204ENST00000397443 LMX1BO60663 402 aa18.36■□□□□ 0.53
CPNE1-204ENST00000397443 IGKV3-15P01624 115 aa18.36■□□□□ 0.53
CPNE1-204ENST00000397443 SERPINB10P48595 397 aa18.36■□□□□ 0.53
CPNE1-204ENST00000397443 MXD1Q05195 221 aa18.36■□□□□ 0.53
CPNE1-204ENST00000397443 Q499Y3 187 aa18.36■□□□□ 0.53
CPNE1-204ENST00000397443 TMEM244Q5VVB8 128 aa18.36■□□□□ 0.53
CPNE1-204ENST00000397443 GDPGP1Q6ZNW5 385 aa18.36■□□□□ 0.53
CPNE1-204ENST00000397443 ZNF101Q8IZC7 436 aa18.36■□□□□ 0.53
CPNE1-204ENST00000397443 OR13C3Q8NGS6 347 aa18.36■□□□□ 0.53
CPNE1-204ENST00000397443 LILRB4Q8NHJ6 448 aa18.36■□□□□ 0.53
CPNE1-204ENST00000397443 OR10A2Q9H208 303 aa18.36■□□□□ 0.53
CPNE1-204ENST00000397443 HEATR1Q9H583 2144 aaKnown RBP18.36■□□□□ 0.53
CPNE1-204ENST00000397443 CDH20Q9HBT6 801 aa18.36■□□□□ 0.53
CPNE1-204ENST00000397443 HHLA2Q9UM44 414 aa18.36■□□□□ 0.53
CPNE1-204ENST00000397443 DHDHQ9UQ10 334 aa18.36■□□□□ 0.53
CPNE1-204ENST00000397443 FAM208BQ5VWN6 2430 aa18.36■□□□□ 0.53
CPNE1-204ENST00000397443 A0A1B0GVI7 797 aa18.35■□□□□ 0.53
CPNE1-204ENST00000397443 ZNF701M0R085 212 aaPredicted RBP18.35■□□□□ 0.53
CPNE1-204ENST00000397443 M0R1B8 84 aa18.35■□□□□ 0.53
CPNE1-204ENST00000397443 SLC22A1O15245 554 aa18.35■□□□□ 0.53
CPNE1-204ENST00000397443 SC5DO75845 299 aa18.35■□□□□ 0.53
CPNE1-204ENST00000397443 NGFP01138 241 aa18.35■□□□□ 0.53
CPNE1-204ENST00000397443 CECR9P0C854 216 aa18.35■□□□□ 0.53
CPNE1-204ENST00000397443 GRNP28799 593 aaKnown RBP18.35■□□□□ 0.53
CPNE1-204ENST00000397443 OR52H1Q8NGJ2 320 aa18.35■□□□□ 0.53
CPNE1-204ENST00000397443 TMEM106AQ96A25 262 aa18.35■□□□□ 0.53
CPNE1-204ENST00000397443 KCTD7Q96MP8 289 aa18.35■□□□□ 0.53
CPNE1-204ENST00000397443 KCNS3Q9BQ31 491 aa18.35■□□□□ 0.53
CPNE1-204ENST00000397443 NOX4Q9NPH5 578 aa18.35■□□□□ 0.53
CPNE1-204ENST00000397443 NPAP1Q9NZP6 1156 aa18.35■□□□□ 0.53
CPNE1-204ENST00000397443 CADP27708 2225 aa18.35■□□□□ 0.53
CPNE1-204ENST00000397443 ACHEP22303 614 aa18.35■□□□□ 0.53
CPNE1-204ENST00000397443 FGF9P31371 208 aaPredicted RBP18.35■□□□□ 0.53
CPNE1-204ENST00000397443 WNT5AP41221 380 aa18.35■□□□□ 0.53
CPNE1-204ENST00000397443 WFDC8Q8IUA0 241 aa18.35■□□□□ 0.53
CPNE1-204ENST00000397443 LYZL4Q96KX0 146 aa18.35■□□□□ 0.53
CPNE1-204ENST00000397443 DCSTAMPQ9H295 470 aa18.35■□□□□ 0.53
CPNE1-204ENST00000397443 TPK1Q9H3S4 243 aa18.35■□□□□ 0.53
CPNE1-204ENST00000397443 MYO18BQ8IUG5 2567 aa18.35■□□□□ 0.53
CPNE1-204ENST00000397443 IGHV1-18A0A0C4DH31 117 aa18.34■□□□□ 0.53
CPNE1-204ENST00000397443 A0A1B0GTI1 187 aa18.34■□□□□ 0.53
CPNE1-204ENST00000397443 ISG15P05161 165 aa18.34■□□□□ 0.53
CPNE1-204ENST00000397443 FAM157BP0CG42 384 aa18.34■□□□□ 0.53
CPNE1-204ENST00000397443 PCSK6P29122 969 aa18.34■□□□□ 0.53
CPNE1-204ENST00000397443 GLYATL3Q5SZD4 288 aa18.34■□□□□ 0.53
CPNE1-204ENST00000397443 SGK3Q96BR1 496 aa18.34■□□□□ 0.53
CPNE1-204ENST00000397443 DERL3Q96Q80 235 aa18.34■□□□□ 0.53
CPNE1-204ENST00000397443 BCL7BQ9BQE9 202 aa18.34■□□□□ 0.53
CPNE1-204ENST00000397443 C1QTNF5Q9BXJ0 243 aa18.34■□□□□ 0.53
CPNE1-204ENST00000397443 TRBV5-5A0A0J9YX44 114 aa18.33■□□□□ 0.53
CPNE1-204ENST00000397443 SHISA3A0PJX4 238 aa18.33■□□□□ 0.53
CPNE1-204ENST00000397443 CDRT1O95170 752 aa18.33■□□□□ 0.53
CPNE1-204ENST00000397443 ZNF182P17025 639 aaPredicted RBP18.33■□□□□ 0.53
CPNE1-204ENST00000397443 SDC2P34741 201 aa18.33■□□□□ 0.53
CPNE1-204ENST00000397443 MTFR2Q6P444 385 aa18.33■□□□□ 0.53
CPNE1-204ENST00000397443 REEP6Q96HR9 211 aa18.33■□□□□ 0.53
CPNE1-204ENST00000397443 KCNJ16Q9NPI9 418 aa18.33■□□□□ 0.53
CPNE1-204ENST00000397443 PIN1P1O15428 100 aa18.33■□□□□ 0.52
CPNE1-204ENST00000397443 CLEC2LP0C7M8 214 aa18.33■□□□□ 0.52
CPNE1-204ENST00000397443 SPATA46Q5T0L3 261 aa18.33■□□□□ 0.52
CPNE1-204ENST00000397443 USP43Q70EL4 1123 aa18.33■□□□□ 0.52
CPNE1-204ENST00000397443 MED18Q9BUE0 208 aa18.33■□□□□ 0.52
CPNE1-204ENST00000397443 SP140LQ9H930 580 aa18.33■□□□□ 0.52
CPNE1-204ENST00000397443 SNTG1Q9NSN8 517 aa18.33■□□□□ 0.52
CPNE1-204ENST00000397443 STARD10Q9Y365 291 aa18.33■□□□□ 0.52
CPNE1-204ENST00000397443 A0A0U1RQV5 110 aa18.32■□□□□ 0.52
CPNE1-204ENST00000397443 GATBO75879 557 aaKnown RBP18.32■□□□□ 0.52
CPNE1-204ENST00000397443 GALP22466 123 aa18.32■□□□□ 0.52
CPNE1-204ENST00000397443 ZNF92Q03936 586 aa18.32■□□□□ 0.52
CPNE1-204ENST00000397443 HSD17B12Q53GQ0 312 aa18.32■□□□□ 0.52
CPNE1-204ENST00000397443 UNQ9370/PRO34162Q6UXP9 181 aa18.32■□□□□ 0.52
CPNE1-204ENST00000397443 RFPL4BQ6ZWI9 263 aa18.32■□□□□ 0.52
CPNE1-204ENST00000397443 KBTBD8Q8NFY9 601 aa18.32■□□□□ 0.52
CPNE1-204ENST00000397443 APOBEC3DQ96AK3 386 aaPredicted RBP18.32■□□□□ 0.52
CPNE1-204ENST00000397443 FGGYQ96C11 551 aa18.32■□□□□ 0.52
CPNE1-204ENST00000397443 PTTG3PQ9NZH4 202 aa18.32■□□□□ 0.52
CPNE1-204ENST00000397443 CASKO14936 926 aa18.31■□□□□ 0.52
CPNE1-204ENST00000397443 IGLV1-44P01699 117 aa18.31■□□□□ 0.52
CPNE1-204ENST00000397443 COLCA1Q6ZS62 124 aa18.31■□□□□ 0.52
CPNE1-204ENST00000397443 OR1J2Q8NGS2 313 aa18.31■□□□□ 0.52
CPNE1-204ENST00000397443 RNASE6Q93091 150 aaKnown RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms