RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 PPP1R3DO95685 299 aa14.13□□□□□ -0.15
HMGN1-203ENST00000380748 OR1E2P47887 323 aa14.13□□□□□ -0.15
HMGN1-203ENST00000380748 CD69Q07108 199 aa14.13□□□□□ -0.15
HMGN1-203ENST00000380748 CRIP3Q6Q6R5 217 aa14.13□□□□□ -0.15
HMGN1-203ENST00000380748 DHDDSQ86SQ9 333 aa14.13□□□□□ -0.15
HMGN1-203ENST00000380748 GLB1L2Q8IW92 636 aa14.13□□□□□ -0.15
HMGN1-203ENST00000380748 SPRYD4Q8WW59 207 aaPredicted RBP14.13□□□□□ -0.15
HMGN1-203ENST00000380748 RASSF5Q8WWW0 418 aa14.13□□□□□ -0.15
HMGN1-203ENST00000380748 RORBQ92753 470 aa14.13□□□□□ -0.15
HMGN1-203ENST00000380748 SLCO4A1Q96BD0 722 aa14.13□□□□□ -0.15
HMGN1-203ENST00000380748 CCL13Q99616 98 aa14.13□□□□□ -0.15
HMGN1-203ENST00000380748 CITED2Q99967 270 aaPredicted RBP14.13□□□□□ -0.15
HMGN1-203ENST00000380748 HDHD2Q9H0R4 259 aa14.13□□□□□ -0.15
HMGN1-203ENST00000380748 KAT8Q9H7Z6 458 aaKnown RBP14.13□□□□□ -0.15
HMGN1-203ENST00000380748 GRHPRQ9UBQ7 328 aa14.13□□□□□ -0.15
HMGN1-203ENST00000380748 XKRYO14609 159 aa14.12□□□□□ -0.15
HMGN1-203ENST00000380748 ZNF26P17031 533 aaPredicted RBP14.12□□□□□ -0.15
HMGN1-203ENST00000380748 CD33P20138 364 aa14.12□□□□□ -0.15
HMGN1-203ENST00000380748 HIST1H3AP68431 136 aa14.12□□□□□ -0.15
HMGN1-203ENST00000380748 HABP2Q14520 560 aaPredicted RBP14.12□□□□□ -0.15
HMGN1-203ENST00000380748 MEP1BQ16820 701 aa14.12□□□□□ -0.15
HMGN1-203ENST00000380748 HIST2H3PS2Q5TEC6 136 aa14.12□□□□□ -0.15
HMGN1-203ENST00000380748 TEX36Q5VZQ5 186 aa14.12□□□□□ -0.15
HMGN1-203ENST00000380748 PGBD2Q6P3X8 592 aa14.12□□□□□ -0.15
HMGN1-203ENST00000380748 CORO6Q6QEF8 472 aa14.12□□□□□ -0.15
HMGN1-203ENST00000380748 HIST2H3AQ71DI3 136 aa14.12□□□□□ -0.15
HMGN1-203ENST00000380748 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.12□□□□□ -0.15
HMGN1-203ENST00000380748 OAFQ86UD1 273 aa14.12□□□□□ -0.15
HMGN1-203ENST00000380748 FAM216BQ8N7L0 139 aa14.12□□□□□ -0.15
HMGN1-203ENST00000380748 SYT4Q9H2B2 425 aa14.12□□□□□ -0.15
HMGN1-203ENST00000380748 RPS6KA6Q9UK32 745 aa14.12□□□□□ -0.15
HMGN1-203ENST00000380748 LHFPL6Q9Y693 200 aa14.12□□□□□ -0.15
HMGN1-203ENST00000380748 hCG_1807616A0A1W2PRN6 198 aa14.11□□□□□ -0.15
HMGN1-203ENST00000380748 TMEM120BA0PK00 339 aa14.11□□□□□ -0.15
HMGN1-203ENST00000380748 A6NLC8 198 aa14.11□□□□□ -0.15
HMGN1-203ENST00000380748 POLR3GO15318 223 aaPredicted RBP14.11□□□□□ -0.15
HMGN1-203ENST00000380748 CHST1O43916 411 aa14.11□□□□□ -0.15
HMGN1-203ENST00000380748 KHDRBS3O75525 346 aaKnown RBP14.11□□□□□ -0.15
HMGN1-203ENST00000380748 GRPP07492 148 aa14.11□□□□□ -0.15
HMGN1-203ENST00000380748 ACSM4P0C7M7 580 aa14.11□□□□□ -0.15
HMGN1-203ENST00000380748 PAX6P26367 422 aa14.11□□□□□ -0.15
HMGN1-203ENST00000380748 RPL4P36578 427 aaKnown RBP14.11□□□□□ -0.15
HMGN1-203ENST00000380748 SLC9A3P48764 834 aa14.11□□□□□ -0.15
HMGN1-203ENST00000380748 KRTAP10-11P60412 298 aa14.11□□□□□ -0.15
HMGN1-203ENST00000380748 KRTAP27-1Q3LI81 207 aa14.11□□□□□ -0.15
HMGN1-203ENST00000380748 WDR38Q5JTN6 314 aa14.11□□□□□ -0.15
HMGN1-203ENST00000380748 PGAP1Q75T13 922 aa14.11□□□□□ -0.15
HMGN1-203ENST00000380748 CCDC80Q76M96 950 aa14.11□□□□□ -0.15
HMGN1-203ENST00000380748 FAM122BQ7Z309 247 aa14.11□□□□□ -0.15
HMGN1-203ENST00000380748 NAA40Q86UY6 237 aa14.11□□□□□ -0.15
HMGN1-203ENST00000380748 NRMQ8IXM6 262 aa14.11□□□□□ -0.15
HMGN1-203ENST00000380748 PLPP7Q8NBV4 271 aa14.11□□□□□ -0.15
HMGN1-203ENST00000380748 WFDC9Q8NEX5 89 aa14.11□□□□□ -0.15
HMGN1-203ENST00000380748 GJC3Q8NFK1 279 aa14.11□□□□□ -0.15
HMGN1-203ENST00000380748 OR10A6Q8NH74 314 aa14.11□□□□□ -0.15
HMGN1-203ENST00000380748 SLC7A13Q8TCU3 470 aa14.11□□□□□ -0.15
HMGN1-203ENST00000380748 ZNF570Q96NI8 536 aa14.11□□□□□ -0.15
HMGN1-203ENST00000380748 CGREF1Q99674 301 aa14.11□□□□□ -0.15
HMGN1-203ENST00000380748 EBF4Q9BQW3 602 aa14.11□□□□□ -0.15
HMGN1-203ENST00000380748 NPFFR1Q9GZQ6 430 aa14.11□□□□□ -0.15
HMGN1-203ENST00000380748 SERTAD4Q9NUC0 356 aa14.11□□□□□ -0.15
HMGN1-203ENST00000380748 CD300LBA8K4G0 201 aa14.1□□□□□ -0.15
HMGN1-203ENST00000380748 EFCAB9A8MZ26 197 aa14.1□□□□□ -0.15
HMGN1-203ENST00000380748 F5H5K5 113 aa14.1□□□□□ -0.15
HMGN1-203ENST00000380748 AHCYL1O43865 530 aa14.1□□□□□ -0.15
HMGN1-203ENST00000380748 LHBP01229 141 aa14.1□□□□□ -0.15
HMGN1-203ENST00000380748 CD14P08571 375 aa14.1□□□□□ -0.15
HMGN1-203ENST00000380748 MSX2P35548 267 aaPredicted RBP14.1□□□□□ -0.15
HMGN1-203ENST00000380748 GZMMP51124 257 aa14.1□□□□□ -0.15
HMGN1-203ENST00000380748 UBE2E1P51965 193 aa14.1□□□□□ -0.15
HMGN1-203ENST00000380748 ACSM1Q08AH1 577 aa14.1□□□□□ -0.15
HMGN1-203ENST00000380748 MALLQ13021 153 aa14.1□□□□□ -0.15
HMGN1-203ENST00000380748 KRR1Q13601 381 aaKnown RBP14.1□□□□□ -0.15
HMGN1-203ENST00000380748 VMACQ2NL98 169 aa14.1□□□□□ -0.15
HMGN1-203ENST00000380748 LRRC75BQ2VPJ9 315 aa14.1□□□□□ -0.15
HMGN1-203ENST00000380748 MRPL21Q7Z2W9 205 aaKnown RBP14.1□□□□□ -0.15
HMGN1-203ENST00000380748 OR51G2Q8NGK0 314 aa14.1□□□□□ -0.15
HMGN1-203ENST00000380748 AJUBAQ96IF1 538 aa14.1□□□□□ -0.15
HMGN1-203ENST00000380748 NKX3-1Q99801 234 aaPredicted RBP14.1□□□□□ -0.15
HMGN1-203ENST00000380748 SLC22A4Q9H015 551 aa14.1□□□□□ -0.15
HMGN1-203ENST00000380748 FAM234AQ9H0X4 552 aa14.1□□□□□ -0.15
HMGN1-203ENST00000380748 ZNF702PQ9H963 129 aa14.1□□□□□ -0.15
HMGN1-203ENST00000380748 RAB18Q9NP72 206 aa14.1□□□□□ -0.15
HMGN1-203ENST00000380748 BAG5Q9UL15 447 aa14.1□□□□□ -0.15
HMGN1-203ENST00000380748 NOP16Q9Y3C1 178 aaKnown RBP14.1□□□□□ -0.15
HMGN1-203ENST00000380748 TENM2Q9NT68 2774 aa14.1□□□□□ -0.15
HMGN1-203ENST00000380748 HTR3EA5X5Y0 456 aa14.09□□□□□ -0.15
HMGN1-203ENST00000380748 GMDSO60547 372 aa14.09□□□□□ -0.15
HMGN1-203ENST00000380748 LCATP04180 440 aa14.09□□□□□ -0.15
HMGN1-203ENST00000380748 IDH3AP50213 366 aa14.09□□□□□ -0.15
HMGN1-203ENST00000380748 COL10A1Q03692 680 aa14.09□□□□□ -0.15
HMGN1-203ENST00000380748 IKZF1Q13422 519 aa14.09□□□□□ -0.15
HMGN1-203ENST00000380748 KCNMB1Q16558 191 aa14.09□□□□□ -0.15
HMGN1-203ENST00000380748 PCK2Q16822 640 aa14.09□□□□□ -0.15
HMGN1-203ENST00000380748 CFAP77Q6ZQR2 320 aa14.09□□□□□ -0.15
HMGN1-203ENST00000380748 WIPF2Q8TF74 440 aaPredicted RBP14.09□□□□□ -0.15
HMGN1-203ENST00000380748 ACOT11Q8WXI4 607 aaPredicted RBP14.09□□□□□ -0.15
HMGN1-203ENST00000380748 DMRTB1Q96MA1 342 aa14.09□□□□□ -0.15
HMGN1-203ENST00000380748 B9D2Q9BPU9 175 aa14.09□□□□□ -0.15
HMGN1-203ENST00000380748 OCSTAMPQ9BR26 566 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms