RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 TAS2R19P59542 299 aa20.37■□□□□ 0.85
VPS16-201ENST00000380443 SF3B4Q15427 424 aaKnown RBP eCLIP20.37■□□□□ 0.855e-6■■■■□ 21.2
VPS16-201ENST00000380443 ABLIM2Q6H8Q1 611 aa20.37■□□□□ 0.85
VPS16-201ENST00000380443 OR2W3Q7Z3T1 314 aa20.37■□□□□ 0.85
VPS16-201ENST00000380443 ABHD12BQ7Z5M8 362 aaPredicted RBP20.37■□□□□ 0.85
VPS16-201ENST00000380443 OR4D6Q8NGJ1 314 aa20.37■□□□□ 0.85
VPS16-201ENST00000380443 FAM46BQ96A09 425 aa20.37■□□□□ 0.85
VPS16-201ENST00000380443 C10orf35Q96D05 121 aa20.37■□□□□ 0.85
VPS16-201ENST00000380443 RBM24Q9BX46 236 aaKnown RBP20.37■□□□□ 0.85
VPS16-201ENST00000380443 CNTD2Q9H8S5 307 aa20.37■□□□□ 0.85
VPS16-201ENST00000380443 GPR84Q9NQS5 396 aa20.37■□□□□ 0.85
VPS16-201ENST00000380443 B4GALT7Q9UBV7 327 aa20.37■□□□□ 0.85
VPS16-201ENST00000380443 CEP250Q9BV73 2442 aa20.37■□□□□ 0.85
VPS16-201ENST00000380443 A0A1W2PNU3 283 aaPredicted RBP20.37■□□□□ 0.85
VPS16-201ENST00000380443 IGLV3-1P01715 115 aa20.37■□□□□ 0.85
VPS16-201ENST00000380443 OTX1P32242 354 aaPredicted RBP20.37■□□□□ 0.85
VPS16-201ENST00000380443 SELENOPP49908 381 aa20.37■□□□□ 0.85
VPS16-201ENST00000380443 OR52N4Q8NGI2 321 aa20.37■□□□□ 0.85
VPS16-201ENST00000380443 CPT1CQ8TCG5 803 aa20.37■□□□□ 0.85
VPS16-201ENST00000380443 ADAMTS17Q8TE56 1095 aa20.37■□□□□ 0.85
VPS16-201ENST00000380443 CPNE4Q96A23 557 aaPredicted RBP20.37■□□□□ 0.85
VPS16-201ENST00000380443 NKIRAS2Q9NYR9 191 aa20.37■□□□□ 0.85
VPS16-201ENST00000380443 KIAA1549Q9HCM3 1950 aa20.36■□□□□ 0.85
VPS16-201ENST00000380443 MEIKINA0A087WXM9 373 aa20.36■□□□□ 0.85
VPS16-201ENST00000380443 ZNF716A6NP11 495 aa20.36■□□□□ 0.85
VPS16-201ENST00000380443 SSNA1O43805 119 aa20.36■□□□□ 0.85
VPS16-201ENST00000380443 TRAPPC6AO75865 159 aa20.36■□□□□ 0.85
VPS16-201ENST00000380443 ALX3O95076 343 aa20.36■□□□□ 0.85
VPS16-201ENST00000380443 CPN1P15169 458 aa20.36■□□□□ 0.85
VPS16-201ENST00000380443 POU3F2P20265 443 aaPredicted RBP20.36■□□□□ 0.85
VPS16-201ENST00000380443 GDF1P27539 372 aa20.36■□□□□ 0.85
VPS16-201ENST00000380443 RCVRNP35243 200 aa20.36■□□□□ 0.85
VPS16-201ENST00000380443 CD96P40200 585 aa20.36■□□□□ 0.85
VPS16-201ENST00000380443 PMPCAQ10713 525 aa20.36■□□□□ 0.85
VPS16-201ENST00000380443 FOXO1Q12778 655 aa20.36■□□□□ 0.85
VPS16-201ENST00000380443 ECH1Q13011 328 aa20.36■□□□□ 0.85
VPS16-201ENST00000380443 TRIP6Q15654 476 aaKnown RBP20.36■□□□□ 0.85
VPS16-201ENST00000380443 LINC00303Q3SY05 128 aa20.36■□□□□ 0.85
VPS16-201ENST00000380443 GLDNQ6ZMI3 551 aaPredicted RBP20.36■□□□□ 0.85
VPS16-201ENST00000380443 Q6ZSR3 168 aa20.36■□□□□ 0.85
VPS16-201ENST00000380443 FAM57BQ71RH2 274 aa20.36■□□□□ 0.85
VPS16-201ENST00000380443 ZNF627Q7L945 461 aa20.36■□□□□ 0.85
VPS16-201ENST00000380443 CLEC1AQ8NC01 280 aa20.36■□□□□ 0.85
VPS16-201ENST00000380443 OR11H7Q8NGC8 314 aa20.36■□□□□ 0.85
VPS16-201ENST00000380443 SEH1LQ96EE3 360 aa20.36■□□□□ 0.85
VPS16-201ENST00000380443 PGAM5Q96HS1 289 aa20.36■□□□□ 0.85
VPS16-201ENST00000380443 TMEM246Q9BRR3 403 aa20.36■□□□□ 0.85
VPS16-201ENST00000380443 OR10A4Q9H209 315 aa20.36■□□□□ 0.85
VPS16-201ENST00000380443 DEPPQ9NTK1 212 aa20.36■□□□□ 0.85
VPS16-201ENST00000380443 ZNF222Q9UK12 451 aa20.36■□□□□ 0.85
VPS16-201ENST00000380443 ARPC1BO15143 372 aaKnown RBP20.35■□□□□ 0.85
VPS16-201ENST00000380443 MELTFP08582 738 aa20.35■□□□□ 0.85
VPS16-201ENST00000380443 RFPL3SP0C7P2 107 aa20.35■□□□□ 0.85
VPS16-201ENST00000380443 GTF2F2P13984 249 aa20.35■□□□□ 0.85
VPS16-201ENST00000380443 ZNF93P35789 620 aaPredicted RBP20.35■□□□□ 0.85
VPS16-201ENST00000380443 GFRA1P56159 465 aa20.35■□□□□ 0.85
VPS16-201ENST00000380443 AIMP2Q13155 320 aaKnown RBP20.35■□□□□ 0.85
VPS16-201ENST00000380443 RIPPLY2Q5TAB7 128 aa20.35■□□□□ 0.85
VPS16-201ENST00000380443 ZNF782Q6ZMW2 699 aaPredicted RBP20.35■□□□□ 0.85
VPS16-201ENST00000380443 COMMD2Q86X83 199 aa20.35■□□□□ 0.85
VPS16-201ENST00000380443 PIAS4Q8N2W9 510 aaPredicted RBP20.35■□□□□ 0.85
VPS16-201ENST00000380443 OR4C16Q8NGL9 310 aa20.35■□□□□ 0.85
VPS16-201ENST00000380443 SPTSSAQ969W0 71 aa20.35■□□□□ 0.85
VPS16-201ENST00000380443 DACT3Q96B18 629 aaPredicted RBP20.35■□□□□ 0.85
VPS16-201ENST00000380443 KCNK15Q9H427 330 aa20.35■□□□□ 0.85
VPS16-201ENST00000380443 NPTNQ9Y639 398 aa20.35■□□□□ 0.85
VPS16-201ENST00000380443 SDK2Q58EX2 2172 aa20.35■□□□□ 0.85
VPS16-201ENST00000380443 CST2P09228 141 aa20.34■□□□□ 0.85
VPS16-201ENST00000380443 UBBP0CG47 229 aa20.34■□□□□ 0.85
VPS16-201ENST00000380443 VEGFCP49767 419 aa20.34■□□□□ 0.85
VPS16-201ENST00000380443 QRFPP83859 136 aa20.34■□□□□ 0.85
VPS16-201ENST00000380443 DCAF10Q5QP82 559 aa20.34■□□□□ 0.85
VPS16-201ENST00000380443 GPR137CQ8N3F9 429 aa20.34■□□□□ 0.85
VPS16-201ENST00000380443 OR13C9Q8NGT0 318 aa20.34■□□□□ 0.85
VPS16-201ENST00000380443 OR14K1Q8NGZ2 314 aa20.34■□□□□ 0.85
VPS16-201ENST00000380443 STMND1H3BQB6 276 aa20.34■□□□□ 0.85
VPS16-201ENST00000380443 CXCL13O43927 109 aa20.34■□□□□ 0.85
VPS16-201ENST00000380443 CYTIPO60759 359 aa20.34■□□□□ 0.85
VPS16-201ENST00000380443 GALK2Q01415 458 aa20.34■□□□□ 0.85
VPS16-201ENST00000380443 CCDC92Q53HC0 331 aaPredicted RBP20.34■□□□□ 0.85
VPS16-201ENST00000380443 WIPI1Q5MNZ9 446 aaPredicted RBP20.34■□□□□ 0.85
VPS16-201ENST00000380443 STEAP1BQ6NZ63 245 aa20.34■□□□□ 0.85
VPS16-201ENST00000380443 AAED1Q7RTV5 226 aa20.34■□□□□ 0.85
VPS16-201ENST00000380443 GLRX5Q86SX6 157 aa20.34■□□□□ 0.85
VPS16-201ENST00000380443 OR2M7Q8NG81 312 aa20.34■□□□□ 0.85
VPS16-201ENST00000380443 OR10D3Q8NH80 312 aa20.34■□□□□ 0.85
VPS16-201ENST00000380443 FER1L6-AS2Q96M78 137 aa20.34■□□□□ 0.85
VPS16-201ENST00000380443 UPB1Q9UBR1 384 aa20.34■□□□□ 0.85
VPS16-201ENST00000380443 PHF3Q92576 2039 aaKnown RBP20.34■□□□□ 0.85
VPS16-201ENST00000380443 FABP7O15540 132 aa20.33■□□□□ 0.85
VPS16-201ENST00000380443 NEURL1O76050 574 aa20.33■□□□□ 0.85
VPS16-201ENST00000380443 HPNP05981 417 aa20.33■□□□□ 0.85
VPS16-201ENST00000380443 CHRM2P08172 466 aa20.33■□□□□ 0.85
VPS16-201ENST00000380443 THBS4P35443 961 aa20.33■□□□□ 0.85
VPS16-201ENST00000380443 HES3Q5TGS1 186 aa20.33■□□□□ 0.85
VPS16-201ENST00000380443 SPICQ8N5J4 248 aa20.33■□□□□ 0.85
VPS16-201ENST00000380443 GRPEL2Q8TAA5 225 aa20.33■□□□□ 0.85
VPS16-201ENST00000380443 AQP3Q92482 292 aa20.33■□□□□ 0.85
VPS16-201ENST00000380443 TMEM45BQ96B21 275 aa20.33■□□□□ 0.85
VPS16-201ENST00000380443 NPDC1Q9NQX5 325 aaPredicted RBP20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms