RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 PLA2G10O15496 165 aa9.63□□□□□ -0.87
NEDD9-201ENST00000379433 LMX1BO60663 402 aa9.63□□□□□ -0.87
NEDD9-201ENST00000379433 EPXP11678 715 aa9.63□□□□□ -0.87
NEDD9-201ENST00000379433 PNLIPP16233 465 aa9.63□□□□□ -0.87
NEDD9-201ENST00000379433 THBS2P35442 1172 aa9.63□□□□□ -0.87
NEDD9-201ENST00000379433 KIR2DL3P43628 341 aa9.63□□□□□ -0.87
NEDD9-201ENST00000379433 SPOCK1Q08629 439 aa9.63□□□□□ -0.87
NEDD9-201ENST00000379433 WDR38Q5JTN6 314 aa9.63□□□□□ -0.87
NEDD9-201ENST00000379433 SPINK14Q6IE38 97 aa9.63□□□□□ -0.87
NEDD9-201ENST00000379433 OR10K2Q6IF99 312 aa9.63□□□□□ -0.87
NEDD9-201ENST00000379433 OR10H5Q8NGA6 315 aa9.63□□□□□ -0.87
NEDD9-201ENST00000379433 OR2G2Q8NGZ5 317 aa9.63□□□□□ -0.87
NEDD9-201ENST00000379433 CPNE2Q96FN4 548 aaPredicted RBP9.63□□□□□ -0.87
NEDD9-201ENST00000379433 DMRTA2Q96SC8 542 aa9.63□□□□□ -0.87
NEDD9-201ENST00000379433 THAP7Q9BT49 309 aaPredicted RBP9.63□□□□□ -0.87
NEDD9-201ENST00000379433 CCDC32Q9BV29 185 aa9.63□□□□□ -0.87
NEDD9-201ENST00000379433 HINT2Q9BX68 163 aa9.63□□□□□ -0.87
NEDD9-201ENST00000379433 COMMD4Q9H0A8 199 aa9.63□□□□□ -0.87
NEDD9-201ENST00000379433 SERINC1Q9NRX5 453 aa9.63□□□□□ -0.87
NEDD9-201ENST00000379433 PLSCR3Q9NRY6 295 aa9.63□□□□□ -0.87
NEDD9-201ENST00000379433 ANKUB1A6NFN9 424 aa9.62□□□□□ -0.87
NEDD9-201ENST00000379433 PTTG1O95997 202 aa9.62□□□□□ -0.87
NEDD9-201ENST00000379433 ANKRD34CP0C6C1 535 aa9.62□□□□□ -0.87
NEDD9-201ENST00000379433 SMIM6P0DI80 62 aa9.62□□□□□ -0.87
NEDD9-201ENST00000379433 ZNF43P17038 809 aa9.62□□□□□ -0.87
NEDD9-201ENST00000379433 ALOX5APP20292 161 aa9.62□□□□□ -0.87
NEDD9-201ENST00000379433 EGR3Q06889 387 aa9.62□□□□□ -0.87
NEDD9-201ENST00000379433 TGIF1Q15583 401 aa9.62□□□□□ -0.87
NEDD9-201ENST00000379433 ATP1A1-AS1Q5TC04 95 aa9.62□□□□□ -0.87
NEDD9-201ENST00000379433 SFRP4Q6FHJ7 346 aaPredicted RBP9.62□□□□□ -0.87
NEDD9-201ENST00000379433 NUBPLQ8TB37 319 aa9.62□□□□□ -0.87
NEDD9-201ENST00000379433 SLC7A6Q92536 515 aa9.62□□□□□ -0.87
NEDD9-201ENST00000379433 BIN3Q9NQY0 253 aa9.62□□□□□ -0.87
NEDD9-201ENST00000379433 PLA2G3Q9NZ20 509 aa9.62□□□□□ -0.87
NEDD9-201ENST00000379433 FOXJ2Q9P0K8 574 aa9.62□□□□□ -0.87
NEDD9-201ENST00000379433 CGGBP1Q9UFW8 167 aaPredicted RBP9.62□□□□□ -0.87
NEDD9-201ENST00000379433 SSUH2Q9Y2M2 353 aa9.62□□□□□ -0.87
NEDD9-201ENST00000379433 GOLT1BQ9Y3E0 138 aa9.62□□□□□ -0.87
NEDD9-201ENST00000379433 FKBP7Q9Y680 259 aa9.62□□□□□ -0.87
NEDD9-201ENST00000379433 NCOA6Q14686 2063 aaPredicted RBP9.62□□□□□ -0.87
NEDD9-201ENST00000379433 APC2O95996 2303 aa9.62□□□□□ -0.87
NEDD9-201ENST00000379433 A0A1W2PQD3 144 aa9.62□□□□□ -0.87
NEDD9-201ENST00000379433 PQLC2LA1A4F0 135 aa9.62□□□□□ -0.87
NEDD9-201ENST00000379433 TP53I11O14683 189 aa9.62□□□□□ -0.87
NEDD9-201ENST00000379433 MT-ND4P03905 459 aa9.62□□□□□ -0.87
NEDD9-201ENST00000379433 ACTBP60709 375 aa9.62□□□□□ -0.87
NEDD9-201ENST00000379433 RPS15P62841 145 aaKnown RBP9.62□□□□□ -0.87
NEDD9-201ENST00000379433 ACTG1P63261 375 aa9.62□□□□□ -0.87
NEDD9-201ENST00000379433 SLC9A3R2Q15599 337 aa9.62□□□□□ -0.87
NEDD9-201ENST00000379433 C9orf135Q5VTT2 229 aa9.62□□□□□ -0.87
NEDD9-201ENST00000379433 SLC23A3Q6PIS1 610 aa9.62□□□□□ -0.87
NEDD9-201ENST00000379433 JAGN1Q8N5M9 183 aa9.62□□□□□ -0.87
NEDD9-201ENST00000379433 BMPERQ8N8U9 685 aa9.62□□□□□ -0.87
NEDD9-201ENST00000379433 NUDT10Q8NFP7 164 aa9.62□□□□□ -0.87
NEDD9-201ENST00000379433 FAM46BQ96A09 425 aa9.62□□□□□ -0.87
NEDD9-201ENST00000379433 ADAM30Q9UKF2 790 aa9.62□□□□□ -0.87
NEDD9-201ENST00000379433 IGHV1-45A0A0A0MS14 117 aa9.62□□□□□ -0.87
NEDD9-201ENST00000379433 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.62□□□□□ -0.87
NEDD9-201ENST00000379433 MEIOCA2RUB1 952 aa9.62□□□□□ -0.87
NEDD9-201ENST00000379433 H7C2Y5 167 aa9.62□□□□□ -0.87
NEDD9-201ENST00000379433 LYRM1O43325 122 aa9.62□□□□□ -0.87
NEDD9-201ENST00000379433 H2AFB2P0C5Z0 115 aa9.62□□□□□ -0.87
NEDD9-201ENST00000379433 COX6A1P12074 109 aa9.62□□□□□ -0.87
NEDD9-201ENST00000379433 SSR4P51571 173 aa9.62□□□□□ -0.87
NEDD9-201ENST00000379433 CCR6P51684 374 aa9.62□□□□□ -0.87
NEDD9-201ENST00000379433 CLDN17P56750 224 aa9.62□□□□□ -0.87
NEDD9-201ENST00000379433 TAF13Q15543 124 aa9.62□□□□□ -0.87
NEDD9-201ENST00000379433 SLC18B1Q6NT16 456 aa9.62□□□□□ -0.87
NEDD9-201ENST00000379433 PRSS35Q8N3Z0 413 aa9.62□□□□□ -0.87
NEDD9-201ENST00000379433 IL22RA1Q8N6P7 574 aa9.62□□□□□ -0.87
NEDD9-201ENST00000379433 OR51D1Q8NGF3 324 aa9.62□□□□□ -0.87
NEDD9-201ENST00000379433 OR13C3Q8NGS6 347 aa9.62□□□□□ -0.87
NEDD9-201ENST00000379433 OR14L1PQ8NHC6 308 aa9.62□□□□□ -0.87
NEDD9-201ENST00000379433 NPRL2Q8WTW4 380 aa9.62□□□□□ -0.87
NEDD9-201ENST00000379433 HGDQ93099 445 aa9.62□□□□□ -0.87
NEDD9-201ENST00000379433 FYTTD1Q96QD9 318 aaKnown RBP9.62□□□□□ -0.87
NEDD9-201ENST00000379433 PLEKHA6Q9Y2H5 1048 aa9.62□□□□□ -0.87
NEDD9-201ENST00000379433 P2RY10O00398 339 aa9.61□□□□□ -0.87
NEDD9-201ENST00000379433 TNFSF11O14788 317 aa9.61□□□□□ -0.87
NEDD9-201ENST00000379433 UPK3AO75631 287 aa9.61□□□□□ -0.87
NEDD9-201ENST00000379433 IFI6P09912 130 aa9.61□□□□□ -0.87
NEDD9-201ENST00000379433 FGF5P12034 268 aa9.61□□□□□ -0.87
NEDD9-201ENST00000379433 MAP2K3P46734 347 aa9.61□□□□□ -0.87
NEDD9-201ENST00000379433 ARF1P84077 181 aaKnown RBP9.61□□□□□ -0.87
NEDD9-201ENST00000379433 PLPPR5Q32ZL2 321 aa9.61□□□□□ -0.87
NEDD9-201ENST00000379433 GLB1L2Q8IW92 636 aa9.61□□□□□ -0.87
NEDD9-201ENST00000379433 UEVLDQ8IX04 471 aa9.61□□□□□ -0.87
NEDD9-201ENST00000379433 ACBD4Q8NC06 268 aa9.61□□□□□ -0.87
NEDD9-201ENST00000379433 OR2Y1Q8NGV0 311 aa9.61□□□□□ -0.87
NEDD9-201ENST00000379433 OR6N1Q8NGY5 312 aa9.61□□□□□ -0.87
NEDD9-201ENST00000379433 OTOSQ8NHW6 89 aa9.61□□□□□ -0.87
NEDD9-201ENST00000379433 RAB24Q969Q5 203 aa9.61□□□□□ -0.87
NEDD9-201ENST00000379433 CITED2Q99967 270 aaPredicted RBP9.61□□□□□ -0.87
NEDD9-201ENST00000379433 MED18Q9BUE0 208 aa9.61□□□□□ -0.87
NEDD9-201ENST00000379433 RBM24Q9BX46 236 aaKnown RBP9.61□□□□□ -0.87
NEDD9-201ENST00000379433 HES7Q9BYE0 225 aa9.61□□□□□ -0.87
NEDD9-201ENST00000379433 CPNE5Q9HCH3 593 aa9.61□□□□□ -0.87
NEDD9-201ENST00000379433 CHST11Q9NPF2 352 aa9.61□□□□□ -0.87
NEDD9-201ENST00000379433 TMEM140Q9NV12 185 aa9.61□□□□□ -0.87
NEDD9-201ENST00000379433 PUS1Q9Y606 427 aaKnown RBP eCLIP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms