RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 SLC22A24Q8N4F4 322 aa15.8■□□□□ 0.12
HLA-DQB1-201ENST00000374943 OR6F1Q8NGZ6 308 aa15.8■□□□□ 0.12
HLA-DQB1-201ENST00000374943 DEDD2Q8WXF8 326 aa15.8■□□□□ 0.12
HLA-DQB1-201ENST00000374943 SPTSSAQ969W0 71 aa15.8■□□□□ 0.12
HLA-DQB1-201ENST00000374943 FOXB1Q99853 325 aa15.8■□□□□ 0.12
HLA-DQB1-201ENST00000374943 PLEK2Q9NYT0 353 aa15.8■□□□□ 0.12
HLA-DQB1-201ENST00000374943 NUBP2Q9Y5Y2 271 aa15.8■□□□□ 0.12
HLA-DQB1-201ENST00000374943 A0A0A6YYH2 397 aa15.79■□□□□ 0.12
HLA-DQB1-201ENST00000374943 NAP1L6A6NFF2 107 aa15.79■□□□□ 0.12
HLA-DQB1-201ENST00000374943 A6NJ64 397 aa15.79■□□□□ 0.12
HLA-DQB1-201ENST00000374943 OR6C65A6NJZ3 312 aa15.79■□□□□ 0.12
HLA-DQB1-201ENST00000374943 ZNF724A8MTY0 619 aa15.79■□□□□ 0.12
HLA-DQB1-201ENST00000374943 SGCEO43556 437 aa15.79■□□□□ 0.12
HLA-DQB1-201ENST00000374943 SYNGR3O43761 229 aa15.79■□□□□ 0.12
HLA-DQB1-201ENST00000374943 GSTT2BP0CG30 244 aa15.79■□□□□ 0.12
HLA-DQB1-201ENST00000374943 RAB6AP20340 208 aa15.79■□□□□ 0.12
HLA-DQB1-201ENST00000374943 ANOS1P23352 680 aa15.79■□□□□ 0.12
HLA-DQB1-201ENST00000374943 SRYQ05066 204 aa15.79■□□□□ 0.12
HLA-DQB1-201ENST00000374943 SLC10A1Q14973 349 aa15.79■□□□□ 0.12
HLA-DQB1-201ENST00000374943 CEACAM16Q2WEN9 425 aa15.79■□□□□ 0.12
HLA-DQB1-201ENST00000374943 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.79■□□□□ 0.12
HLA-DQB1-201ENST00000374943 COMMD2Q86X83 199 aa15.79■□□□□ 0.12
HLA-DQB1-201ENST00000374943 OR14K1Q8NGZ2 314 aa15.79■□□□□ 0.12
HLA-DQB1-201ENST00000374943 GCDHQ92947 438 aaPredicted RBP15.79■□□□□ 0.12
HLA-DQB1-201ENST00000374943 SLCO5A1Q9H2Y9 848 aa15.79■□□□□ 0.12
HLA-DQB1-201ENST00000374943 KCNK15Q9H427 330 aa15.79■□□□□ 0.12
HLA-DQB1-201ENST00000374943 BCO1Q9HAY6 547 aa15.79■□□□□ 0.12
HLA-DQB1-201ENST00000374943 PARPBPQ9NWS1 579 aa15.79■□□□□ 0.12
HLA-DQB1-201ENST00000374943 NOSIPQ9Y314 301 aaKnown RBP15.79■□□□□ 0.12
HLA-DQB1-201ENST00000374943 DMXL1Q9Y485 3027 aa15.79■□□□□ 0.12
HLA-DQB1-201ENST00000374943 ANKRD20A5PA0PJZ0 165 aa15.79■□□□□ 0.12
HLA-DQB1-201ENST00000374943 M0R135 149 aa15.79■□□□□ 0.12
HLA-DQB1-201ENST00000374943 TNFSF10P50591 281 aa15.79■□□□□ 0.12
HLA-DQB1-201ENST00000374943 SRSF6Q13247 344 aaKnown RBP15.79■□□□□ 0.12
HLA-DQB1-201ENST00000374943 SNTB2Q13425 540 aaKnown RBP15.79■□□□□ 0.12
HLA-DQB1-201ENST00000374943 KRTAP27-1Q3LI81 207 aa15.79■□□□□ 0.12
HLA-DQB1-201ENST00000374943 FREM1Q5H8C1 2179 aa15.79■□□□□ 0.12
HLA-DQB1-201ENST00000374943 OLFML2AQ68BL7 652 aa15.79■□□□□ 0.12
HLA-DQB1-201ENST00000374943 MTFR2Q6P444 385 aa15.79■□□□□ 0.12
HLA-DQB1-201ENST00000374943 IGFL2Q6UWQ7 119 aa15.79■□□□□ 0.12
HLA-DQB1-201ENST00000374943 OR52N4Q8NGI2 321 aa15.79■□□□□ 0.12
HLA-DQB1-201ENST00000374943 OR4D6Q8NGJ1 314 aa15.79■□□□□ 0.12
HLA-DQB1-201ENST00000374943 OR13C9Q8NGT0 318 aa15.79■□□□□ 0.12
HLA-DQB1-201ENST00000374943 SLC7A6Q92536 515 aa15.79■□□□□ 0.12
HLA-DQB1-201ENST00000374943 ZNF799Q96GE5 643 aa15.79■□□□□ 0.12
HLA-DQB1-201ENST00000374943 ZDHHC11Q9H8X9 412 aa15.79■□□□□ 0.12
HLA-DQB1-201ENST00000374943 ALG5Q9Y673 324 aa15.79■□□□□ 0.12
HLA-DQB1-201ENST00000374943 OR6C6A6NF89 314 aa15.78■□□□□ 0.12
HLA-DQB1-201ENST00000374943 E9PLN8 166 aa15.78■□□□□ 0.12
HLA-DQB1-201ENST00000374943 F5H5K5 113 aa15.78■□□□□ 0.12
HLA-DQB1-201ENST00000374943 MRPL33O75394 65 aaKnown RBP15.78■□□□□ 0.12
HLA-DQB1-201ENST00000374943 BPNT1O95861 308 aa15.78■□□□□ 0.12
HLA-DQB1-201ENST00000374943 ITGB2P05107 769 aa15.78■□□□□ 0.12
HLA-DQB1-201ENST00000374943 B4GALT1P15291 398 aa15.78■□□□□ 0.12
HLA-DQB1-201ENST00000374943 RAG2P55895 527 aa15.78■□□□□ 0.12
HLA-DQB1-201ENST00000374943 PCBD1P61457 104 aa15.78■□□□□ 0.12
HLA-DQB1-201ENST00000374943 DRAM2Q6UX65 266 aa15.78■□□□□ 0.12
HLA-DQB1-201ENST00000374943 OR5AS1Q8N127 324 aa15.78■□□□□ 0.12
HLA-DQB1-201ENST00000374943 PHF21AQ96BD5 680 aa15.78■□□□□ 0.12
HLA-DQB1-201ENST00000374943 FAM71F1Q96KD3 344 aaPredicted RBP15.78■□□□□ 0.12
HLA-DQB1-201ENST00000374943 LYZL4Q96KX0 146 aa15.78■□□□□ 0.12
HLA-DQB1-201ENST00000374943 SOX7Q9BT81 388 aa15.78■□□□□ 0.12
HLA-DQB1-201ENST00000374943 CNTD2Q9H8S5 307 aa15.78■□□□□ 0.12
HLA-DQB1-201ENST00000374943 FBLN5Q9UBX5 448 aa15.78■□□□□ 0.12
HLA-DQB1-201ENST00000374943 N6AMT1Q9Y5N5 214 aa15.78■□□□□ 0.12
HLA-DQB1-201ENST00000374943 V9GYS6 101 aa15.78■□□□□ 0.12
HLA-DQB1-201ENST00000374943 CEP250Q9BV73 2442 aa15.77■□□□□ 0.12
HLA-DQB1-201ENST00000374943 RPL36A-HNRNPH2H7BZ11 118 aa15.77■□□□□ 0.12
HLA-DQB1-201ENST00000374943 H7C417 338 aa15.77■□□□□ 0.12
HLA-DQB1-201ENST00000374943 KDM4BO94953 1096 aa15.77■□□□□ 0.12
HLA-DQB1-201ENST00000374943 TCRBP04435 133 aa15.77■□□□□ 0.12
HLA-DQB1-201ENST00000374943 ALDOBP05062 364 aa15.77■□□□□ 0.12
HLA-DQB1-201ENST00000374943 ABOP16442 354 aa15.77■□□□□ 0.12
HLA-DQB1-201ENST00000374943 WT1P19544 449 aaPredicted RBP15.77■□□□□ 0.12
HLA-DQB1-201ENST00000374943 SLC6A9P48067 706 aa15.77■□□□□ 0.12
HLA-DQB1-201ENST00000374943 SSBP1Q04837 148 aaKnown RBP15.77■□□□□ 0.12
HLA-DQB1-201ENST00000374943 RTP5Q14D33 572 aa15.77■□□□□ 0.12
HLA-DQB1-201ENST00000374943 RNPS1Q15287 305 aaKnown RBP15.77■□□□□ 0.12
HLA-DQB1-201ENST00000374943 OR52H1Q8NGJ2 320 aa15.77■□□□□ 0.12
HLA-DQB1-201ENST00000374943 OR1F12Q8NHA8 337 aa15.77■□□□□ 0.12
HLA-DQB1-201ENST00000374943 C10orf35Q96D05 121 aa15.77■□□□□ 0.12
HLA-DQB1-201ENST00000374943 ST6GAL2Q96JF0 529 aa15.77■□□□□ 0.12
HLA-DQB1-201ENST00000374943 NKX3-1Q99801 234 aaPredicted RBP15.77■□□□□ 0.12
HLA-DQB1-201ENST00000374943 CACNG6Q9BXT2 260 aa15.77■□□□□ 0.12
HLA-DQB1-201ENST00000374943 ATG5Q9H1Y0 275 aa15.77■□□□□ 0.12
HLA-DQB1-201ENST00000374943 HRASLSQ9HDD0 168 aa15.77■□□□□ 0.12
HLA-DQB1-201ENST00000374943 DLL3Q9NYJ7 618 aa15.77■□□□□ 0.12
HLA-DQB1-201ENST00000374943 KLK11Q9UBX7 282 aa15.77■□□□□ 0.12
HLA-DQB1-201ENST00000374943 MTFP1Q9UDX5 166 aa15.77■□□□□ 0.12
HLA-DQB1-201ENST00000374943 LIPGQ9Y5X9 500 aa15.77■□□□□ 0.12
HLA-DQB1-201ENST00000374943 RTTNQ86VV8 2226 aa15.77■□□□□ 0.11
HLA-DQB1-201ENST00000374943 DHRS3O75911 302 aa15.76■□□□□ 0.11
HLA-DQB1-201ENST00000374943 CPN1P15169 458 aa15.76■□□□□ 0.11
HLA-DQB1-201ENST00000374943 ZNF32P17041 273 aa15.76■□□□□ 0.11
HLA-DQB1-201ENST00000374943 GIFP27352 417 aa15.76■□□□□ 0.11
HLA-DQB1-201ENST00000374943 THBS4P35443 961 aa15.76■□□□□ 0.11
HLA-DQB1-201ENST00000374943 NOVA1P51513 510 aaKnown RBP15.76■□□□□ 0.11
HLA-DQB1-201ENST00000374943 TSPO2Q5TGU0 170 aa15.76■□□□□ 0.11
HLA-DQB1-201ENST00000374943 CDH24Q86UP0 819 aa15.76■□□□□ 0.11
HLA-DQB1-201ENST00000374943 NAA40Q86UY6 237 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms