RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 GDF2Q9UK05 429 aaPredicted RBP10.62□□□□□ -0.71
USF1-203ENST00000368021 POLR1DQ9Y2S0 133 aa10.62□□□□□ -0.71
USF1-203ENST00000368021 ZNF281Q9Y2X9 895 aa10.62□□□□□ -0.71
USF1-203ENST00000368021 LRP12Q9Y561 859 aa10.62□□□□□ -0.71
USF1-203ENST00000368021 FLNCQ14315 2725 aa10.61□□□□□ -0.71
USF1-203ENST00000368021 TMEM212A6NML5 194 aa10.61□□□□□ -0.71
USF1-203ENST00000368021 H3BUI4 141 aa10.61□□□□□ -0.71
USF1-203ENST00000368021 SSX5O60225 188 aa10.61□□□□□ -0.71
USF1-203ENST00000368021 GATBO75879 557 aaKnown RBP10.61□□□□□ -0.71
USF1-203ENST00000368021 RPP14O95059 124 aaKnown RBP10.61□□□□□ -0.71
USF1-203ENST00000368021 ZFPL1O95159 310 aa10.61□□□□□ -0.71
USF1-203ENST00000368021 IFNA4P05014 189 aa10.61□□□□□ -0.71
USF1-203ENST00000368021 PTBP1P26599 531 aaKnown RBP eCLIP10.61□□□□□ -0.71
USF1-203ENST00000368021 ZNF273Q14593 569 aa10.61□□□□□ -0.71
USF1-203ENST00000368021 CARTPTQ16568 116 aa10.61□□□□□ -0.71
USF1-203ENST00000368021 NRN1LQ496H8 165 aa10.61□□□□□ -0.71
USF1-203ENST00000368021 FAM76BQ5HYJ3 339 aa10.61□□□□□ -0.71
USF1-203ENST00000368021 FAM27BQ5VT28 67 aa10.61□□□□□ -0.71
USF1-203ENST00000368021 HSD17B8Q92506 261 aa10.61□□□□□ -0.71
USF1-203ENST00000368021 PHYHIPQ92561 330 aa10.61□□□□□ -0.71
USF1-203ENST00000368021 YIPF5Q969M3 257 aa10.61□□□□□ -0.71
USF1-203ENST00000368021 PDCD1LG2Q9BQ51 273 aa10.61□□□□□ -0.71
USF1-203ENST00000368021 FRRS1LQ9P0K9 344 aa10.61□□□□□ -0.71
USF1-203ENST00000368021 CLCF1Q9UBD9 225 aa10.61□□□□□ -0.71
USF1-203ENST00000368021 ASH2LQ9UBL3 628 aa10.61□□□□□ -0.71
USF1-203ENST00000368021 UBQLN2Q9UHD9 624 aa10.61□□□□□ -0.71
USF1-203ENST00000368021 KCNK7Q9Y2U2 307 aa10.61□□□□□ -0.71
USF1-203ENST00000368021 CD8B2A6NJW9 211 aa10.61□□□□□ -0.71
USF1-203ENST00000368021 ZNF878C9JN71 531 aa10.61□□□□□ -0.71
USF1-203ENST00000368021 RPL36A-HNRNPH2H7BZ11 118 aa10.61□□□□□ -0.71
USF1-203ENST00000368021 WNT11O96014 354 aa10.61□□□□□ -0.71
USF1-203ENST00000368021 CD8BP10966 210 aa10.61□□□□□ -0.71
USF1-203ENST00000368021 RPS19P39019 145 aaKnown RBP10.61□□□□□ -0.71
USF1-203ENST00000368021 PER3P56645 1201 aa10.61□□□□□ -0.71
USF1-203ENST00000368021 RPS11P62280 158 aaKnown RBP eCLIP10.61□□□□□ -0.71
USF1-203ENST00000368021 SGCAQ16586 387 aa10.61□□□□□ -0.71
USF1-203ENST00000368021 BAK1Q16611 211 aa10.61□□□□□ -0.71
USF1-203ENST00000368021 OR7E24Q6IFN5 339 aa10.61□□□□□ -0.71
USF1-203ENST00000368021 FAM180AQ6UWF9 173 aa10.61□□□□□ -0.71
USF1-203ENST00000368021 TEX261Q6UWH6 196 aa10.61□□□□□ -0.71
USF1-203ENST00000368021 OVCH2Q7RTZ1 564 aa10.61□□□□□ -0.71
USF1-203ENST00000368021 COMMD7Q86VX2 200 aa10.61□□□□□ -0.71
USF1-203ENST00000368021 OR8H1Q8NGG4 311 aa10.61□□□□□ -0.71
USF1-203ENST00000368021 OR5AK2Q8NH90 309 aa10.61□□□□□ -0.71
USF1-203ENST00000368021 SLC25A46Q96AG3 418 aa10.61□□□□□ -0.71
USF1-203ENST00000368021 SLAMF6Q96DU3 332 aa10.61□□□□□ -0.71
USF1-203ENST00000368021 ZNF837Q96EG3 531 aaPredicted RBP10.61□□□□□ -0.71
USF1-203ENST00000368021 C4orf45Q96LM5 186 aa10.61□□□□□ -0.71
USF1-203ENST00000368021 ALKBH3Q96Q83 286 aaPredicted RBP10.61□□□□□ -0.71
USF1-203ENST00000368021 GPR35Q9HC97 309 aa10.61□□□□□ -0.71
USF1-203ENST00000368021 PLSCR3Q9NRY6 295 aa10.61□□□□□ -0.71
USF1-203ENST00000368021 TMEM38BQ9NVV0 291 aa10.61□□□□□ -0.71
USF1-203ENST00000368021 U3KQ87 197 aa10.61□□□□□ -0.71
USF1-203ENST00000368021 FREM1Q5H8C1 2179 aa10.6□□□□□ -0.71
USF1-203ENST00000368021 MED12LQ86YW9 2145 aa10.6□□□□□ -0.71
USF1-203ENST00000368021 A0A1B0GTH9 108 aa10.6□□□□□ -0.71
USF1-203ENST00000368021 OR4C45A6NMZ5 311 aa10.6□□□□□ -0.71
USF1-203ENST00000368021 AHRRA9YTQ3 701 aa10.6□□□□□ -0.71
USF1-203ENST00000368021 WRBO00258 174 aa10.6□□□□□ -0.71
USF1-203ENST00000368021 SRSF10O75494 262 aaKnown RBP10.6□□□□□ -0.71
USF1-203ENST00000368021 WISP2O76076 250 aa10.6□□□□□ -0.71
USF1-203ENST00000368021 H2BFMP0C1H6 154 aa10.6□□□□□ -0.71
USF1-203ENST00000368021 SDC2P34741 201 aa10.6□□□□□ -0.71
USF1-203ENST00000368021 MMP16P51512 607 aa10.6□□□□□ -0.71
USF1-203ENST00000368021 HIST1H3AP68431 136 aa10.6□□□□□ -0.71
USF1-203ENST00000368021 RELQ04864 619 aaPredicted RBP10.6□□□□□ -0.71
USF1-203ENST00000368021 ENDOGQ14249 297 aaKnown RBP10.6□□□□□ -0.71
USF1-203ENST00000368021 INSL4Q14641 139 aa10.6□□□□□ -0.71
USF1-203ENST00000368021 ACSM3Q53FZ2 586 aa10.6□□□□□ -0.71
USF1-203ENST00000368021 HIST2H3PS2Q5TEC6 136 aa10.6□□□□□ -0.71
USF1-203ENST00000368021 TSPO2Q5TGU0 170 aa10.6□□□□□ -0.71
USF1-203ENST00000368021 PLXDC2Q6UX71 529 aa10.6□□□□□ -0.71
USF1-203ENST00000368021 TFAP2EQ6VUC0 442 aa10.6□□□□□ -0.71
USF1-203ENST00000368021 CFAP77Q6ZQR2 320 aa10.6□□□□□ -0.71
USF1-203ENST00000368021 HIST2H3AQ71DI3 136 aa10.6□□□□□ -0.71
USF1-203ENST00000368021 KRT74Q7RTS7 529 aa10.6□□□□□ -0.71
USF1-203ENST00000368021 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.6□□□□□ -0.71
USF1-203ENST00000368021 GJC3Q8NFK1 279 aa10.6□□□□□ -0.71
USF1-203ENST00000368021 OR10S1Q8NGN2 331 aa10.6□□□□□ -0.71
USF1-203ENST00000368021 RBPMSQ93062 196 aaKnown RBP10.6□□□□□ -0.71
USF1-203ENST00000368021 APH1AQ96BI3 265 aa10.6□□□□□ -0.71
USF1-203ENST00000368021 GMPPAQ96IJ6 420 aaPredicted RBP10.6□□□□□ -0.71
USF1-203ENST00000368021 DMRTB1Q96MA1 342 aa10.6□□□□□ -0.71
USF1-203ENST00000368021 COMMD4Q9H0A8 199 aa10.6□□□□□ -0.71
USF1-203ENST00000368021 CALHM2Q9HA72 323 aa10.6□□□□□ -0.71
USF1-203ENST00000368021 RANGRFQ9HD47 186 aaPredicted RBP10.6□□□□□ -0.71
USF1-203ENST00000368021 R4GMQ9 66 aa10.6□□□□□ -0.71
USF1-203ENST00000368021 GTF3C1Q12789 2109 aa10.6□□□□□ -0.71
USF1-203ENST00000368021 J3QKU1 62 aa10.59□□□□□ -0.71
USF1-203ENST00000368021 SS18L1O75177 396 aaPredicted RBP10.59□□□□□ -0.71
USF1-203ENST00000368021 KRT33AO76009 404 aa10.59□□□□□ -0.71
USF1-203ENST00000368021 CDRT1O95170 752 aa10.59□□□□□ -0.71
USF1-203ENST00000368021 TPOP07202 933 aa10.59□□□□□ -0.71
USF1-203ENST00000368021 CST2P09228 141 aa10.59□□□□□ -0.71
USF1-203ENST00000368021 AGTR1P30556 359 aa10.59□□□□□ -0.71
USF1-203ENST00000368021 MTNR1BP49286 362 aa10.59□□□□□ -0.71
USF1-203ENST00000368021 RORCP51449 518 aa10.59□□□□□ -0.71
USF1-203ENST00000368021 CEACAM16Q2WEN9 425 aa10.59□□□□□ -0.71
USF1-203ENST00000368021 KRTCAP3Q53RY4 240 aa10.59□□□□□ -0.71
USF1-203ENST00000368021 ZMAT1Q5H9K5 638 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms