RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 COMMD5Q9GZQ3 224 aa14.56□□□□□ -0.08
COL18A1-203ENST00000359759 RHOFQ9HBH0 211 aa14.56□□□□□ -0.08
COL18A1-203ENST00000359759 ADGRL4Q9HBW9 690 aa14.56□□□□□ -0.08
COL18A1-203ENST00000359759 TIMM10BQ9Y5J6 103 aa14.56□□□□□ -0.08
COL18A1-203ENST00000359759 M0R135 149 aa14.56□□□□□ -0.08
COL18A1-203ENST00000359759 OXA1LQ15070 435 aa14.56□□□□□ -0.08
COL18A1-203ENST00000359759 STAC2Q6ZMT1 411 aa14.56□□□□□ -0.08
COL18A1-203ENST00000359759 ARHGEF39Q8N4T4 335 aa14.56□□□□□ -0.08
COL18A1-203ENST00000359759 ZNF799Q96GE5 643 aa14.56□□□□□ -0.08
COL18A1-203ENST00000359759 SDF2Q99470 211 aa14.56□□□□□ -0.08
COL18A1-203ENST00000359759 MON2Q7Z3U7 1717 aa14.55□□□□□ -0.08
COL18A1-203ENST00000359759 OR2M5A3KFT3 312 aa14.55□□□□□ -0.08
COL18A1-203ENST00000359759 PPP1CBP62140 327 aa14.55□□□□□ -0.08
COL18A1-203ENST00000359759 TIPARPQ7Z3E1 657 aaKnown RBP14.55□□□□□ -0.08
COL18A1-203ENST00000359759 OR2AK2Q8NG84 335 aa14.55□□□□□ -0.08
COL18A1-203ENST00000359759 CLEC18AA5D8T8 446 aa14.55□□□□□ -0.08
COL18A1-203ENST00000359759 RFC3P40938 356 aa14.55□□□□□ -0.08
COL18A1-203ENST00000359759 SLC25A35Q3KQZ1 300 aa14.55□□□□□ -0.08
COL18A1-203ENST00000359759 TMEM97Q5BJF2 176 aa14.55□□□□□ -0.08
COL18A1-203ENST00000359759 ZNF574Q6ZN55 896 aaPredicted RBP14.55□□□□□ -0.08
COL18A1-203ENST00000359759 ZNF429Q86V71 674 aa14.55□□□□□ -0.08
COL18A1-203ENST00000359759 CLEC18CQ8NCF0 446 aa14.55□□□□□ -0.08
COL18A1-203ENST00000359759 ZNF680Q8NEM1 530 aa14.55□□□□□ -0.08
COL18A1-203ENST00000359759 AKR7LQ8NHP1 331 aa14.55□□□□□ -0.08
COL18A1-203ENST00000359759 HDAC8Q9BY41 377 aa14.55□□□□□ -0.08
COL18A1-203ENST00000359759 ZNF785A8K8V0 405 aa14.55□□□□□ -0.08
COL18A1-203ENST00000359759 GPX2P18283 190 aa14.55□□□□□ -0.08
COL18A1-203ENST00000359759 CST5P28325 142 aaPredicted RBP14.55□□□□□ -0.08
COL18A1-203ENST00000359759 RPL18Q07020 188 aaKnown RBP14.55□□□□□ -0.08
COL18A1-203ENST00000359759 TECTBQ96PL2 329 aa14.55□□□□□ -0.08
COL18A1-203ENST00000359759 TAAR6Q96RI8 345 aa14.55□□□□□ -0.08
COL18A1-203ENST00000359759 MED29Q9NX70 200 aa14.55□□□□□ -0.08
COL18A1-203ENST00000359759 CRXO43186 299 aaPredicted RBP14.55□□□□□ -0.08
COL18A1-203ENST00000359759 BMP5P22003 454 aa14.55□□□□□ -0.08
COL18A1-203ENST00000359759 OR10D4PQ8NGN7 298 aa14.55□□□□□ -0.08
COL18A1-203ENST00000359759 EDEM2Q9BV94 578 aa14.55□□□□□ -0.08
COL18A1-203ENST00000359759 DLL4Q9NR61 685 aa14.55□□□□□ -0.08
COL18A1-203ENST00000359759 KLK11Q9UBX7 282 aa14.55□□□□□ -0.08
COL18A1-203ENST00000359759 HS3ST2Q9Y278 367 aa14.55□□□□□ -0.08
COL18A1-203ENST00000359759 GATCO43716 136 aaKnown RBP14.55□□□□□ -0.08
COL18A1-203ENST00000359759 CST7O76096 145 aa14.55□□□□□ -0.08
COL18A1-203ENST00000359759 MGMTP16455 207 aa14.55□□□□□ -0.08
COL18A1-203ENST00000359759 CALCRP30988 508 aa14.55□□□□□ -0.08
COL18A1-203ENST00000359759 CSF2RBP32927 897 aa14.55□□□□□ -0.08
COL18A1-203ENST00000359759 EXT1Q16394 746 aa14.55□□□□□ -0.08
COL18A1-203ENST00000359759 RNF212Q495C1 297 aa14.55□□□□□ -0.08
COL18A1-203ENST00000359759 TMPRSS11FQ6ZWK6 438 aa14.55□□□□□ -0.08
COL18A1-203ENST00000359759 TMEM179BQ7Z7N9 219 aa14.55□□□□□ -0.08
COL18A1-203ENST00000359759 P4HTMQ9NXG6 502 aa14.55□□□□□ -0.08
COL18A1-203ENST00000359759 CCDC187A0A096LP49 1063 aa14.54□□□□□ -0.08
COL18A1-203ENST00000359759 A0A1W2PR48 441 aa14.54□□□□□ -0.08
COL18A1-203ENST00000359759 S100A8P05109 93 aa14.54□□□□□ -0.08
COL18A1-203ENST00000359759 SPATA46Q5T0L3 261 aa14.54□□□□□ -0.08
COL18A1-203ENST00000359759 WFDC5Q8TCV5 224 aa14.54□□□□□ -0.08
COL18A1-203ENST00000359759 GPX8Q8TED1 209 aa14.54□□□□□ -0.08
COL18A1-203ENST00000359759 NOL4LQ96MY1 436 aaPredicted RBP14.54□□□□□ -0.08
COL18A1-203ENST00000359759 OR51B4Q9Y5P0 310 aa14.54□□□□□ -0.08
COL18A1-203ENST00000359759 NUP188Q5SRE5 1749 aa14.54□□□□□ -0.08
COL18A1-203ENST00000359759 H0Y8X5 98 aa14.54□□□□□ -0.08
COL18A1-203ENST00000359759 BCL2L11O43521 198 aa14.54□□□□□ -0.08
COL18A1-203ENST00000359759 CIDEAO60543 219 aa14.54□□□□□ -0.08
COL18A1-203ENST00000359759 CEBPEQ15744 281 aa14.54□□□□□ -0.08
COL18A1-203ENST00000359759 VWA2Q5GFL6 755 aa14.54□□□□□ -0.08
COL18A1-203ENST00000359759 FCRL6Q6DN72 434 aa14.54□□□□□ -0.08
COL18A1-203ENST00000359759 TMEM37Q8WXS4 190 aa14.54□□□□□ -0.08
COL18A1-203ENST00000359759 MS4A6EQ96DS6 147 aa14.54□□□□□ -0.08
COL18A1-203ENST00000359759 MED18Q9BUE0 208 aa14.54□□□□□ -0.08
COL18A1-203ENST00000359759 SPP1P10451 314 aa14.54□□□□□ -0.08
COL18A1-203ENST00000359759 ZXDAP98168 799 aa14.54□□□□□ -0.08
COL18A1-203ENST00000359759 OR2A1Q8NGT9 310 aa14.54□□□□□ -0.08
COL18A1-203ENST00000359759 NWD2Q9ULI1 1742 aa14.54□□□□□ -0.08
COL18A1-203ENST00000359759 SH2D7A6NKC9 451 aaPredicted RBP14.54□□□□□ -0.08
COL18A1-203ENST00000359759 CDAP32320 146 aa14.54□□□□□ -0.08
COL18A1-203ENST00000359759 GALR1P47211 349 aa14.54□□□□□ -0.08
COL18A1-203ENST00000359759 PDCD1Q15116 288 aa14.54□□□□□ -0.08
COL18A1-203ENST00000359759 DHRS11Q6UWP2 260 aa14.54□□□□□ -0.08
COL18A1-203ENST00000359759 SLC16A12Q6ZSM3 486 aa14.54□□□□□ -0.08
COL18A1-203ENST00000359759 BAP18Q8IXM2 172 aa14.54□□□□□ -0.08
COL18A1-203ENST00000359759 OR10V1Q8NGI7 309 aa14.54□□□□□ -0.08
COL18A1-203ENST00000359759 GMLQ99445 158 aa14.54□□□□□ -0.08
COL18A1-203ENST00000359759 KIR3DX1Q9H7L2 352 aa14.54□□□□□ -0.08
COL18A1-203ENST00000359759 TRAPPC4Q9Y296 219 aa14.54□□□□□ -0.08
COL18A1-203ENST00000359759 MBLAC1A4D2B0 266 aaPredicted RBP14.54□□□□□ -0.08
COL18A1-203ENST00000359759 CNN1P51911 297 aaKnown RBP14.54□□□□□ -0.08
COL18A1-203ENST00000359759 INSM1Q01101 510 aaPredicted RBP14.54□□□□□ -0.08
COL18A1-203ENST00000359759 PCK2Q16822 640 aa14.54□□□□□ -0.08
COL18A1-203ENST00000359759 FOXB2Q5VYV0 432 aa14.54□□□□□ -0.08
COL18A1-203ENST00000359759 ZNF485Q8NCK3 441 aa14.54□□□□□ -0.08
COL18A1-203ENST00000359759 OR4S1Q8NGB4 309 aa14.54□□□□□ -0.08
COL18A1-203ENST00000359759 OR4C16Q8NGL9 310 aa14.54□□□□□ -0.08
COL18A1-203ENST00000359759 PLEKHA2Q9HB19 425 aa14.54□□□□□ -0.08
COL18A1-203ENST00000359759 CMC2Q9NRP2 79 aa14.54□□□□□ -0.08
COL18A1-203ENST00000359759 SLCO1C1Q9NYB5 712 aa14.54□□□□□ -0.08
COL18A1-203ENST00000359759 POLDIP2Q9Y2S7 368 aa14.54□□□□□ -0.08
COL18A1-203ENST00000359759 TMEM189-UBE2V1I3L0A0 370 aa14.53□□□□□ -0.08
COL18A1-203ENST00000359759 RNF224P0DH78 156 aa14.53□□□□□ -0.08
COL18A1-203ENST00000359759 THEM4Q5T1C6 240 aa14.53□□□□□ -0.08
COL18A1-203ENST00000359759 SPNS1Q9H2V7 528 aa14.53□□□□□ -0.08
COL18A1-203ENST00000359759 CROCCQ5TZA2 2017 aa14.53□□□□□ -0.08
COL18A1-203ENST00000359759 BTG2P78543 158 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms