RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 CLDN1O95832 211 aa12.08□□□□□ -0.48
PDLIM5-203ENST00000359265 ACSM4P0C7M7 580 aa12.08□□□□□ -0.48
PDLIM5-203ENST00000359265 PATE4P0C8F1 98 aa12.08□□□□□ -0.48
PDLIM5-203ENST00000359265 COX5BP10606 129 aa12.08□□□□□ -0.48
PDLIM5-203ENST00000359265 FOXF2Q12947 444 aa12.08□□□□□ -0.48
PDLIM5-203ENST00000359265 MOGQ16653 247 aa12.08□□□□□ -0.48
PDLIM5-203ENST00000359265 PABPC1L2AQ5JQF8 200 aa12.08□□□□□ -0.48
PDLIM5-203ENST00000359265 COMMD2Q86X83 199 aa12.08□□□□□ -0.48
PDLIM5-203ENST00000359265 OR13C3Q8NGS6 347 aa12.08□□□□□ -0.48
PDLIM5-203ENST00000359265 AKR7LQ8NHP1 331 aa12.08□□□□□ -0.48
PDLIM5-203ENST00000359265 FGFBP3Q8TAT2 258 aa12.08□□□□□ -0.48
PDLIM5-203ENST00000359265 S100ZQ8WXG8 99 aa12.08□□□□□ -0.48
PDLIM5-203ENST00000359265 BCL2L2Q92843 193 aaPredicted RBP12.08□□□□□ -0.48
PDLIM5-203ENST00000359265 PPP1R14AQ96A00 147 aa12.08□□□□□ -0.48
PDLIM5-203ENST00000359265 TMEM106AQ96A25 262 aa12.08□□□□□ -0.48
PDLIM5-203ENST00000359265 KCNS3Q9BQ31 491 aa12.08□□□□□ -0.48
PDLIM5-203ENST00000359265 SLC17A5Q9NRA2 495 aa12.08□□□□□ -0.48
PDLIM5-203ENST00000359265 PLSCR4Q9NRQ2 329 aa12.08□□□□□ -0.48
PDLIM5-203ENST00000359265 ZNF224Q9NZL3 707 aa12.08□□□□□ -0.48
PDLIM5-203ENST00000359265 FBN3Q75N90 2809 aa12.08□□□□□ -0.48
PDLIM5-203ENST00000359265 CIB4A0PJX0 185 aa12.07□□□□□ -0.48
PDLIM5-203ENST00000359265 H3BSH0 61 aa12.07□□□□□ -0.48
PDLIM5-203ENST00000359265 SYT7O43581 403 aa12.07□□□□□ -0.48
PDLIM5-203ENST00000359265 TNFSF13O75888 250 aa12.07□□□□□ -0.48
PDLIM5-203ENST00000359265 NCR1O76036 304 aa12.07□□□□□ -0.48
PDLIM5-203ENST00000359265 SLC2A1P11166 492 aa12.07□□□□□ -0.48
PDLIM5-203ENST00000359265 CD79AP11912 226 aa12.07□□□□□ -0.48
PDLIM5-203ENST00000359265 ZNF12P17014 697 aa12.07□□□□□ -0.48
PDLIM5-203ENST00000359265 SRMP19623 302 aa12.07□□□□□ -0.48
PDLIM5-203ENST00000359265 FSTP19883 344 aa12.07□□□□□ -0.48
PDLIM5-203ENST00000359265 COX5AP20674 150 aa12.07□□□□□ -0.48
PDLIM5-203ENST00000359265 GNLYP22749 145 aa12.07□□□□□ -0.48
PDLIM5-203ENST00000359265 IGHV1-2P23083 117 aa12.07□□□□□ -0.48
PDLIM5-203ENST00000359265 PLP2Q04941 152 aa12.07□□□□□ -0.48
PDLIM5-203ENST00000359265 KRTAP27-1Q3LI81 207 aa12.07□□□□□ -0.48
PDLIM5-203ENST00000359265 TBRG1Q3YBR2 411 aa12.07□□□□□ -0.48
PDLIM5-203ENST00000359265 MZT2AQ6P582 158 aa12.07□□□□□ -0.48
PDLIM5-203ENST00000359265 PRSS45Q7RTY3 260 aa12.07□□□□□ -0.48
PDLIM5-203ENST00000359265 BTLAQ7Z6A9 289 aa12.07□□□□□ -0.48
PDLIM5-203ENST00000359265 DOLPP1Q86YN1 238 aa12.07□□□□□ -0.48
PDLIM5-203ENST00000359265 CCDC36Q8IYA8 594 aa12.07□□□□□ -0.48
PDLIM5-203ENST00000359265 C1orf162Q8NEQ5 155 aaPredicted RBP12.07□□□□□ -0.48
PDLIM5-203ENST00000359265 OR52H1Q8NGJ2 320 aa12.07□□□□□ -0.48
PDLIM5-203ENST00000359265 OR51A4Q8NGJ6 313 aa12.07□□□□□ -0.48
PDLIM5-203ENST00000359265 ZFAND2BQ8WV99 257 aa12.07□□□□□ -0.48
PDLIM5-203ENST00000359265 ASB5Q8WWX0 329 aa12.07□□□□□ -0.48
PDLIM5-203ENST00000359265 SFXN3Q9BWM7 321 aa12.07□□□□□ -0.48
PDLIM5-203ENST00000359265 HMG20AQ9NP66 347 aa12.07□□□□□ -0.48
PDLIM5-203ENST00000359265 CKLFQ9UBR5 152 aa12.07□□□□□ -0.48
PDLIM5-203ENST00000359265 SHANK1Q9Y566 2161 aa12.07□□□□□ -0.48
PDLIM5-203ENST00000359265 N6AMT1Q9Y5N5 214 aa12.07□□□□□ -0.48
PDLIM5-203ENST00000359265 A0A0U1RQV5 110 aa12.06□□□□□ -0.48
PDLIM5-203ENST00000359265 NOTOA8MTQ0 251 aa12.06□□□□□ -0.48
PDLIM5-203ENST00000359265 TBX1O43435 398 aa12.06□□□□□ -0.48
PDLIM5-203ENST00000359265 TOXO94900 526 aa12.06□□□□□ -0.48
PDLIM5-203ENST00000359265 HLA-HP01893 362 aa12.06□□□□□ -0.48
PDLIM5-203ENST00000359265 DBHP09172 617 aa12.06□□□□□ -0.48
PDLIM5-203ENST00000359265 CCL1P22362 96 aa12.06□□□□□ -0.48
PDLIM5-203ENST00000359265 CEACAM8P31997 349 aaPredicted RBP12.06□□□□□ -0.48
PDLIM5-203ENST00000359265 MAGEB1P43366 347 aa12.06□□□□□ -0.48
PDLIM5-203ENST00000359265 BMXP51813 675 aa12.06□□□□□ -0.48
PDLIM5-203ENST00000359265 CAV3P56539 151 aa12.06□□□□□ -0.48
PDLIM5-203ENST00000359265 UBE2NP61088 152 aaKnown RBP12.06□□□□□ -0.48
PDLIM5-203ENST00000359265 SFRP5Q5T4F7 317 aa12.06□□□□□ -0.48
PDLIM5-203ENST00000359265 SFXN4Q6P4A7 337 aa12.06□□□□□ -0.48
PDLIM5-203ENST00000359265 STAC2Q6ZMT1 411 aa12.06□□□□□ -0.48
PDLIM5-203ENST00000359265 BEND4Q6ZU67 534 aa12.06□□□□□ -0.48
PDLIM5-203ENST00000359265 DOK3Q7L591 496 aa12.06□□□□□ -0.48
PDLIM5-203ENST00000359265 ZNF433Q8N7K0 673 aaPredicted RBP12.06□□□□□ -0.48
PDLIM5-203ENST00000359265 CCDC54Q8NEL0 328 aa12.06□□□□□ -0.48
PDLIM5-203ENST00000359265 ACOT12Q8WYK0 555 aa12.06□□□□□ -0.48
PDLIM5-203ENST00000359265 SLC7A6Q92536 515 aa12.06□□□□□ -0.48
PDLIM5-203ENST00000359265 KCTD12Q96CX2 325 aaKnown RBP12.06□□□□□ -0.48
PDLIM5-203ENST00000359265 STARD4Q96DR4 205 aa12.06□□□□□ -0.48
PDLIM5-203ENST00000359265 POM121Q96HA1 1249 aa12.06□□□□□ -0.48
PDLIM5-203ENST00000359265 CEP19Q96LK0 163 aa12.06□□□□□ -0.48
PDLIM5-203ENST00000359265 WDR12Q9GZL7 423 aaKnown RBP12.06□□□□□ -0.48
PDLIM5-203ENST00000359265 OR10A2Q9H208 303 aa12.06□□□□□ -0.48
PDLIM5-203ENST00000359265 FOXJ3Q9UPW0 622 aa12.06□□□□□ -0.48
PDLIM5-203ENST00000359265 CELSR1Q9NYQ6 3014 aa12.05□□□□□ -0.48
PDLIM5-203ENST00000359265 MED13LQ71F56 2210 aa12.05□□□□□ -0.48
PDLIM5-203ENST00000359265 A0A0G2JK05 382 aa12.05□□□□□ -0.48
PDLIM5-203ENST00000359265 ANKRD61A6NGH8 418 aa12.05□□□□□ -0.48
PDLIM5-203ENST00000359265 CLDN25C9JDP6 229 aa12.05□□□□□ -0.48
PDLIM5-203ENST00000359265 RGS5O15539 181 aa12.05□□□□□ -0.48
PDLIM5-203ENST00000359265 TMEM127O75204 238 aa12.05□□□□□ -0.48
PDLIM5-203ENST00000359265 RAD51DO75771 328 aa12.05□□□□□ -0.48
PDLIM5-203ENST00000359265 CGAP01215 116 aa12.05□□□□□ -0.48
PDLIM5-203ENST00000359265 GLI4P10075 376 aa12.05□□□□□ -0.48
PDLIM5-203ENST00000359265 HOXB1P14653 301 aaPredicted RBP12.05□□□□□ -0.48
PDLIM5-203ENST00000359265 ZNF20P17024 532 aa12.05□□□□□ -0.48
PDLIM5-203ENST00000359265 HOXC12P31275 282 aa12.05□□□□□ -0.48
PDLIM5-203ENST00000359265 OR10A3P58181 314 aa12.05□□□□□ -0.48
PDLIM5-203ENST00000359265 RAB1AP62820 205 aa12.05□□□□□ -0.48
PDLIM5-203ENST00000359265 DYNC1I2Q13409 638 aaKnown RBP12.05□□□□□ -0.48
PDLIM5-203ENST00000359265 ZNF846Q147U1 533 aa12.05□□□□□ -0.48
PDLIM5-203ENST00000359265 GSG1Q2KHT4 349 aa12.05□□□□□ -0.48
PDLIM5-203ENST00000359265 RSPO1Q2MKA7 263 aaPredicted RBP12.05□□□□□ -0.48
PDLIM5-203ENST00000359265 HIKESHIQ53FT3 197 aa12.05□□□□□ -0.48
PDLIM5-203ENST00000359265 CEP78Q5JTW2 689 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms