RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 SBK2P0C263 348 aa10.18□□□□□ -0.78
FN1-204ENST00000356005 WIPI1Q5MNZ9 446 aaPredicted RBP10.18□□□□□ -0.78
FN1-204ENST00000356005 STEAP1BQ6NZ63 245 aa10.18□□□□□ -0.78
FN1-204ENST00000356005 TBPL2Q6SJ96 375 aa10.18□□□□□ -0.78
FN1-204ENST00000356005 MOB3BQ86TA1 216 aa10.18□□□□□ -0.78
FN1-204ENST00000356005 COX14Q96I36 57 aa10.18□□□□□ -0.78
FN1-204ENST00000356005 PKMYT1Q99640 499 aa10.18□□□□□ -0.78
FN1-204ENST00000356005 KLK8O60259 260 aa10.18□□□□□ -0.78
FN1-204ENST00000356005 PAPLNO95428 1278 aa10.18□□□□□ -0.78
FN1-204ENST00000356005 CHRNB1P11230 501 aa10.18□□□□□ -0.78
FN1-204ENST00000356005 B4GALT1P15291 398 aa10.18□□□□□ -0.78
FN1-204ENST00000356005 HAAOP46952 286 aa10.18□□□□□ -0.78
FN1-204ENST00000356005 SLC9A3R2Q15599 337 aa10.18□□□□□ -0.78
FN1-204ENST00000356005 PAQR6Q6TCH4 344 aa10.18□□□□□ -0.78
FN1-204ENST00000356005 LGALS14Q8TCE9 139 aa10.18□□□□□ -0.78
FN1-204ENST00000356005 MFFQ9GZY8 342 aa10.18□□□□□ -0.78
FN1-204ENST00000356005 IGLV3-16A0A075B6K0 115 aa10.18□□□□□ -0.78
FN1-204ENST00000356005 TRDV1A0A1B0GX56 115 aa10.18□□□□□ -0.78
FN1-204ENST00000356005 SLC38A9Q8NBW4 561 aa10.18□□□□□ -0.78
FN1-204ENST00000356005 HPSE2Q8WWQ2 592 aa10.18□□□□□ -0.78
FN1-204ENST00000356005 OCIAD1Q9NX40 245 aa10.18□□□□□ -0.78
FN1-204ENST00000356005 GTF3C1Q12789 2109 aa10.18□□□□□ -0.78
FN1-204ENST00000356005 TRAV38-1A0A0B4J264 116 aa10.18□□□□□ -0.78
FN1-204ENST00000356005 ELK1P19419 428 aa10.18□□□□□ -0.78
FN1-204ENST00000356005 NPY4RP50391 375 aa10.18□□□□□ -0.78
FN1-204ENST00000356005 NUBP1P53384 320 aa10.18□□□□□ -0.78
FN1-204ENST00000356005 RAB5BP61020 215 aa10.18□□□□□ -0.78
FN1-204ENST00000356005 RELAQ04206 551 aa10.18□□□□□ -0.78
FN1-204ENST00000356005 PWWP2BQ6NUJ5 590 aa10.18□□□□□ -0.78
FN1-204ENST00000356005 OR10AD1Q8NGE0 317 aa10.18□□□□□ -0.78
FN1-204ENST00000356005 PELI1Q96FA3 418 aa10.18□□□□□ -0.78
FN1-204ENST00000356005 ADAT1Q9BUB4 502 aaKnown RBP10.18□□□□□ -0.78
FN1-204ENST00000356005 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.18□□□□□ -0.78
FN1-204ENST00000356005 GDF2Q9UK05 429 aaPredicted RBP10.18□□□□□ -0.78
FN1-204ENST00000356005 TMEM30CPA0ZSE6 113 aa10.18□□□□□ -0.78
FN1-204ENST00000356005 ALG1L2C9J202 215 aa10.18□□□□□ -0.78
FN1-204ENST00000356005 DHHO43323 396 aa10.18□□□□□ -0.78
FN1-204ENST00000356005 HLA-DOBP13765 273 aa10.18□□□□□ -0.78
FN1-204ENST00000356005 ZNF767PQ75MW2 155 aa10.18□□□□□ -0.78
FN1-204ENST00000356005 RETREG3Q86VR2 466 aa10.18□□□□□ -0.78
FN1-204ENST00000356005 PLPP7Q8NBV4 271 aa10.18□□□□□ -0.78
FN1-204ENST00000356005 OR1M1Q8NGA1 313 aa10.18□□□□□ -0.78
FN1-204ENST00000356005 HMGCLL1Q8TB92 370 aa10.18□□□□□ -0.78
FN1-204ENST00000356005 FOXB1Q99853 325 aa10.18□□□□□ -0.78
FN1-204ENST00000356005 SMOC1Q9H4F8 434 aa10.18□□□□□ -0.78
FN1-204ENST00000356005 FBXO8Q9NRD0 319 aa10.18□□□□□ -0.78
FN1-204ENST00000356005 PSORS1C1Q9UIG5 152 aa10.18□□□□□ -0.78
FN1-204ENST00000356005 A0A087WUJ7 227 aa10.18□□□□□ -0.78
FN1-204ENST00000356005 PMP2P02689 132 aa10.18□□□□□ -0.78
FN1-204ENST00000356005 ZNF121P58317 390 aaPredicted RBP10.18□□□□□ -0.78
FN1-204ENST00000356005 TNFAIP6P98066 277 aaPredicted RBP10.18□□□□□ -0.78
FN1-204ENST00000356005 HMGN3Q15651 99 aa10.18□□□□□ -0.78
FN1-204ENST00000356005 C20orf85Q9H1P6 137 aa10.18□□□□□ -0.78
FN1-204ENST00000356005 TCEAL2Q9H3H9 227 aaPredicted RBP10.18□□□□□ -0.78
FN1-204ENST00000356005 NLRC5Q86WI3 1866 aa10.17□□□□□ -0.78
FN1-204ENST00000356005 HOXC8P31273 242 aa10.17□□□□□ -0.78
FN1-204ENST00000356005 SOX18P35713 384 aa10.17□□□□□ -0.78
FN1-204ENST00000356005 PGFP49763 221 aa10.17□□□□□ -0.78
FN1-204ENST00000356005 SRSF5Q13243 272 aaKnown RBP10.17□□□□□ -0.78
FN1-204ENST00000356005 PCK2Q16822 640 aa10.17□□□□□ -0.78
FN1-204ENST00000356005 PMS2CLQ68D20 193 aa10.17□□□□□ -0.78
FN1-204ENST00000356005 KDF1Q8NAX2 398 aaPredicted RBP10.17□□□□□ -0.78
FN1-204ENST00000356005 OR10D3Q8NH80 312 aa10.17□□□□□ -0.78
FN1-204ENST00000356005 SLC35B4Q969S0 331 aa10.17□□□□□ -0.78
FN1-204ENST00000356005 ASF1BQ9NVP2 202 aa10.17□□□□□ -0.78
FN1-204ENST00000356005 A4GNTQ9UNA3 340 aa10.17□□□□□ -0.78
FN1-204ENST00000356005 EP300Q09472 2414 aaPredicted RBP10.17□□□□□ -0.78
FN1-204ENST00000356005 NUDT19A8MXV4 375 aa10.17□□□□□ -0.78
FN1-204ENST00000356005 STARD6P59095 220 aa10.17□□□□□ -0.78
FN1-204ENST00000356005 USF2Q15853 346 aaPredicted RBP10.17□□□□□ -0.78
FN1-204ENST00000356005 KDM4DQ6B0I6 523 aa10.17□□□□□ -0.78
FN1-204ENST00000356005 ZNF620Q6ZNG0 422 aa10.17□□□□□ -0.78
FN1-204ENST00000356005 TEAD3Q99594 435 aa10.17□□□□□ -0.78
FN1-204ENST00000356005 LOC107986453A0A1B0GWG9 222 aa10.17□□□□□ -0.78
FN1-204ENST00000356005 AIPO00170 330 aa10.17□□□□□ -0.78
FN1-204ENST00000356005 CLEC2AQ6UVW9 174 aa10.17□□□□□ -0.78
FN1-204ENST00000356005 POM121L2Q96KW2 1035 aa10.17□□□□□ -0.78
FN1-204ENST00000356005 SSX4O60224 188 aa10.17□□□□□ -0.78
FN1-204ENST00000356005 HLA-HP01893 362 aa10.17□□□□□ -0.78
FN1-204ENST00000356005 DRD3P35462 400 aa10.17□□□□□ -0.78
FN1-204ENST00000356005 RAC3P60763 192 aa10.17□□□□□ -0.78
FN1-204ENST00000356005 EMX1Q04741 257 aaPredicted RBP10.17□□□□□ -0.78
FN1-204ENST00000356005 SLC29A1Q99808 456 aa10.17□□□□□ -0.78
FN1-204ENST00000356005 DDA1Q9BW61 102 aa10.17□□□□□ -0.78
FN1-204ENST00000356005 SIAEQ9HAT2 523 aa10.17□□□□□ -0.78
FN1-204ENST00000356005 GMPR2Q9P2T1 348 aaKnown RBP10.17□□□□□ -0.78
FN1-204ENST00000356005 A0A1B0GUH1 482 aa10.17□□□□□ -0.78
FN1-204ENST00000356005 GNB3P16520 340 aa10.17□□□□□ -0.78
FN1-204ENST00000356005 KIR2DS2P43631 304 aa10.17□□□□□ -0.78
FN1-204ENST00000356005 RAB7AP51149 207 aa10.17□□□□□ -0.78
FN1-204ENST00000356005 FOXF1Q12946 379 aa10.17□□□□□ -0.78
FN1-204ENST00000356005 SERGEFQ9UGK8 458 aa10.17□□□□□ -0.78
FN1-204ENST00000356005 ALPK2Q86TB3 2170 aa10.17□□□□□ -0.78
FN1-204ENST00000356005 GALNSP34059 522 aa10.17□□□□□ -0.78
FN1-204ENST00000356005 MDH2P40926 338 aaKnown RBP10.17□□□□□ -0.78
FN1-204ENST00000356005 OR8B3Q8NGG8 313 aa10.17□□□□□ -0.78
FN1-204ENST00000356005 SPSB1Q96BD6 273 aa10.17□□□□□ -0.78
FN1-204ENST00000356005 OR8B2Q96RD0 313 aa10.17□□□□□ -0.78
FN1-204ENST00000356005 F8W036 122 aa10.16□□□□□ -0.78
FN1-204ENST00000356005 DLL1O00548 723 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms