RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 LMX1BO60663 402 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 FKTNO75072 461 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 SFT2D2O95562 160 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 MPIG6BO95866 241 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 IFNA10P01566 189 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 RNH1P13489 461 aaKnown RBP6.83□□□□□ -1.32
BRCA1-201ENST00000352993 GLRA1P23415 457 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 CTGFP29279 349 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 SNCAP37840 140 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 PPM1FP49593 454 aaPredicted RBP6.83□□□□□ -1.32
BRCA1-201ENST00000352993 EMP2P54851 167 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 SPCS3P61009 180 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 RPS23P62266 143 aaKnown RBP6.83□□□□□ -1.32
BRCA1-201ENST00000352993 RAB1AP62820 205 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 RPL18Q07020 188 aaKnown RBP6.83□□□□□ -1.32
BRCA1-201ENST00000352993 CCINQ13939 588 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 FAHD2BQ6P2I3 314 aaPredicted RBP6.83□□□□□ -1.32
BRCA1-201ENST00000352993 ERN2Q76MJ5 926 aaKnown RBP6.83□□□□□ -1.32
BRCA1-201ENST00000352993 VN1R4Q7Z5H5 301 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 OR2I1PQ8NGU4 316 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 MRGPRFQ96AM1 343 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 FAHD2AQ96GK7 314 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 STACQ99469 402 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 SLC35B3Q9H1N7 401 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 PRDM13Q9H4Q3 707 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 RAB18Q9NP72 206 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 RAB22AQ9UL26 194 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 RAB27BO00194 218 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 P2RY10O00398 339 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 GPR75O95800 540 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 BTF3P20290 206 aaKnown RBP6.83□□□□□ -1.32
BRCA1-201ENST00000352993 C5AR1P21730 350 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 CCR2P41597 374 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 ZP2Q05996 745 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 DPTQ07507 201 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 OR8G1Q15617 311 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 CEBPEQ15744 281 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 ANKRD55Q3KP44 614 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 KHDC3LQ587J8 217 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 ZNF385CQ66K41 422 aaPredicted RBP6.83□□□□□ -1.32
BRCA1-201ENST00000352993 ZNF765Q7L2R6 523 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 RTN4RL2Q86UN3 420 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 RERGQ96A58 199 aaPredicted RBP6.83□□□□□ -1.32
BRCA1-201ENST00000352993 FGGYQ96C11 551 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 SPACA7Q96KW9 195 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 OR8B4Q96RC9 309 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 STARD5Q9NSY2 213 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 DOCK9Q9BZ29 2069 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 TRBV6-7A0A0A0MS04 114 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 IFITM10A6NMD0 228 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 DBX1A6NMT0 343 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 IFNA21P01568 189 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 TRGC2P03986 189 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 SNRPCP09234 159 aaKnown RBP6.82□□□□□ -1.32
BRCA1-201ENST00000352993 HKR1P10072 659 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 SLC6A9P48067 706 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 SLC25A1P53007 311 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 SRSF5Q13243 272 aaKnown RBP6.82□□□□□ -1.32
BRCA1-201ENST00000352993 TCTN1Q2MV58 587 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 ZNF260Q3ZCT1 412 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 MESTQ5EB52 335 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 TCEAL6Q6IPX3 200 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 C17orf99Q6UX52 265 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 TMEM52Q8NDY8 209 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 OR4C3Q8NH37 302 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 OTOSQ8NHW6 89 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 RAB7BQ96AH8 199 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 TCTN2Q96GX1 697 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 SRMSQ9H3Y6 488 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 CNTD2Q9H8S5 307 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 MBNL1Q9NR56 388 aaKnown RBP6.82□□□□□ -1.32
BRCA1-201ENST00000352993 SLC2A4RGQ9NR83 387 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 C19orf12Q9NSK7 152 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 FREM3P0C091 2139 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 LOC107986453A0A1B0GWG9 222 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 NSA2O95478 260 aaKnown RBP6.82□□□□□ -1.32
BRCA1-201ENST00000352993 IGKV1D-16P01601 117 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 HEXBP07686 556 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 ASCL1P50553 236 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 RPS15AP62244 130 aaKnown RBP6.82□□□□□ -1.32
BRCA1-201ENST00000352993 RNF4P78317 190 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 ACY1Q03154 408 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 HAGHQ16775 308 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 TCEAL5Q5H9L2 206 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 DMRTC1Q5HYR2 192 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 PLPP4Q5VZY2 271 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 TMEM182Q6ZP80 229 aaPredicted RBP6.82□□□□□ -1.32
BRCA1-201ENST00000352993 FNDC9Q8TBE3 224 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 SCGB3A2Q96PL1 93 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 GPER1Q99527 375 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 LPAR4Q99677 370 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 G6PC3Q9BUM1 346 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 SLC26A1Q9H2B4 701 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 BANF2Q9H503 90 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 C5orf66Q9H5L9 145 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 UBQLN4Q9NRR5 601 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 DNAJB11Q9UBS4 358 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 ATG2BQ96BY7 2078 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 OR5H15A6NDH6 313 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 OR5H1A6NKK0 313 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms