RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 H2AFB2P0C5Z0 115 aa12.4□□□□□ -0.42
CDK5RAP1-202ENST00000346416 CD82P27701 267 aa12.4□□□□□ -0.42
CDK5RAP1-202ENST00000346416 OTX1P32242 354 aaPredicted RBP12.4□□□□□ -0.42
CDK5RAP1-202ENST00000346416 CLDN18P56856 261 aa12.4□□□□□ -0.42
CDK5RAP1-202ENST00000346416 PLGLB1Q02325 96 aa12.4□□□□□ -0.42
CDK5RAP1-202ENST00000346416 FAAP20Q6NZ36 180 aa12.4□□□□□ -0.42
CDK5RAP1-202ENST00000346416 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.4□□□□□ -0.42
CDK5RAP1-202ENST00000346416 MDS2Q8NDY4 140 aa12.4□□□□□ -0.42
CDK5RAP1-202ENST00000346416 UQCC2Q9BRT2 126 aa12.4□□□□□ -0.42
CDK5RAP1-202ENST00000346416 GHITMQ9H3K2 345 aa12.4□□□□□ -0.42
CDK5RAP1-202ENST00000346416 TMEM38BQ9NVV0 291 aa12.4□□□□□ -0.42
CDK5RAP1-202ENST00000346416 KLF13Q9Y2Y9 288 aaPredicted RBP12.4□□□□□ -0.42
CDK5RAP1-202ENST00000346416 C7orf66A4D0T2 115 aa12.4□□□□□ -0.43
CDK5RAP1-202ENST00000346416 FAM172BPA6NC97 362 aa12.4□□□□□ -0.43
CDK5RAP1-202ENST00000346416 NME2P1O60361 137 aa12.4□□□□□ -0.43
CDK5RAP1-202ENST00000346416 ERCC1P07992 297 aaPredicted RBP12.4□□□□□ -0.43
CDK5RAP1-202ENST00000346416 DBHP09172 617 aa12.4□□□□□ -0.43
CDK5RAP1-202ENST00000346416 B4GALT1P15291 398 aa12.4□□□□□ -0.43
CDK5RAP1-202ENST00000346416 PSMB1P20618 241 aaKnown RBP12.4□□□□□ -0.43
CDK5RAP1-202ENST00000346416 NME2P22392 152 aa12.4□□□□□ -0.43
CDK5RAP1-202ENST00000346416 PRSS3P35030 304 aa12.4□□□□□ -0.43
CDK5RAP1-202ENST00000346416 CAPZA1P52907 286 aa12.4□□□□□ -0.43
CDK5RAP1-202ENST00000346416 GUCA2AQ02747 115 aa12.4□□□□□ -0.43
CDK5RAP1-202ENST00000346416 PCGF3Q3KNV8 242 aa12.4□□□□□ -0.43
CDK5RAP1-202ENST00000346416 OLFML2AQ68BL7 652 aa12.4□□□□□ -0.43
CDK5RAP1-202ENST00000346416 SLC25A25Q6KCM7 469 aa12.4□□□□□ -0.43
CDK5RAP1-202ENST00000346416 ZNF627Q7L945 461 aa12.4□□□□□ -0.43
CDK5RAP1-202ENST00000346416 OR56B4Q8NH76 319 aa12.4□□□□□ -0.43
CDK5RAP1-202ENST00000346416 PTX4Q96A99 478 aa12.4□□□□□ -0.43
CDK5RAP1-202ENST00000346416 C20orf85Q9H1P6 137 aa12.4□□□□□ -0.43
CDK5RAP1-202ENST00000346416 TP63Q9H3D4 680 aaPredicted RBP12.4□□□□□ -0.43
CDK5RAP1-202ENST00000346416 NKIRAS2Q9NYR9 191 aa12.4□□□□□ -0.43
CDK5RAP1-202ENST00000346416 RIF1Q5UIP0 2472 aaKnown RBP12.39□□□□□ -0.43
CDK5RAP1-202ENST00000346416 LOC400499M0QZD8 3231 aa12.39□□□□□ -0.43
CDK5RAP1-202ENST00000346416 M0R135 149 aa12.39□□□□□ -0.43
CDK5RAP1-202ENST00000346416 GSTT2P0CG29 244 aa12.39□□□□□ -0.43
CDK5RAP1-202ENST00000346416 ZNF93P35789 620 aaPredicted RBP12.39□□□□□ -0.43
CDK5RAP1-202ENST00000346416 MEOX1P50221 254 aa12.39□□□□□ -0.43
CDK5RAP1-202ENST00000346416 RAG2P55895 527 aa12.39□□□□□ -0.43
CDK5RAP1-202ENST00000346416 CEACAM16Q2WEN9 425 aa12.39□□□□□ -0.43
CDK5RAP1-202ENST00000346416 RIPPLY2Q5TAB7 128 aa12.39□□□□□ -0.43
CDK5RAP1-202ENST00000346416 TMEM53Q6P2H8 277 aa12.39□□□□□ -0.43
CDK5RAP1-202ENST00000346416 PLXDC2Q6UX71 529 aa12.39□□□□□ -0.43
CDK5RAP1-202ENST00000346416 PGAP1Q75T13 922 aa12.39□□□□□ -0.43
CDK5RAP1-202ENST00000346416 ZNF799Q96GE5 643 aa12.39□□□□□ -0.43
CDK5RAP1-202ENST00000346416 LYZL4Q96KX0 146 aa12.39□□□□□ -0.43
CDK5RAP1-202ENST00000346416 SPACA5Q96QH8 159 aa12.39□□□□□ -0.43
CDK5RAP1-202ENST00000346416 ACTR6Q9GZN1 396 aa12.39□□□□□ -0.43
CDK5RAP1-202ENST00000346416 FAM186AA6NE01 2351 aa12.39□□□□□ -0.43
CDK5RAP1-202ENST00000346416 MEIS3P1A6NDR6 274 aa12.38□□□□□ -0.43
CDK5RAP1-202ENST00000346416 KLRC4-KLRK1H3BQV0 150 aa12.38□□□□□ -0.43
CDK5RAP1-202ENST00000346416 SGCEO43556 437 aa12.38□□□□□ -0.43
CDK5RAP1-202ENST00000346416 IGLV3-1P01715 115 aa12.38□□□□□ -0.43
CDK5RAP1-202ENST00000346416 YES1P07947 543 aa12.38□□□□□ -0.43
CDK5RAP1-202ENST00000346416 CST2P09228 141 aa12.38□□□□□ -0.43
CDK5RAP1-202ENST00000346416 ZNF708P17019 499 aa12.38□□□□□ -0.43
CDK5RAP1-202ENST00000346416 IFITM2Q01629 132 aa12.38□□□□□ -0.43
CDK5RAP1-202ENST00000346416 PMPCAQ10713 525 aa12.38□□□□□ -0.43
CDK5RAP1-202ENST00000346416 TCF15Q12870 199 aa12.38□□□□□ -0.43
CDK5RAP1-202ENST00000346416 SF3B4Q15427 424 aaKnown RBP eCLIP12.38□□□□□ -0.434e-8■■□□□ 14.4
CDK5RAP1-202ENST00000346416 GSG1Q2KHT4 349 aa12.38□□□□□ -0.43
CDK5RAP1-202ENST00000346416 MOGAT2Q3SYC2 334 aa12.38□□□□□ -0.43
CDK5RAP1-202ENST00000346416 RNF144BQ7Z419 303 aa12.38□□□□□ -0.43
CDK5RAP1-202ENST00000346416 VASH2Q86V25 355 aa12.38□□□□□ -0.43
CDK5RAP1-202ENST00000346416 TCTE3Q8IZS6 198 aa12.38□□□□□ -0.43
CDK5RAP1-202ENST00000346416 OR5AS1Q8N127 324 aa12.38□□□□□ -0.43
CDK5RAP1-202ENST00000346416 OR14K1Q8NGZ2 314 aa12.38□□□□□ -0.43
CDK5RAP1-202ENST00000346416 SPTSSAQ969W0 71 aa12.38□□□□□ -0.43
CDK5RAP1-202ENST00000346416 FOXB1Q99853 325 aa12.38□□□□□ -0.43
CDK5RAP1-202ENST00000346416 GPR35Q9HC97 309 aa12.38□□□□□ -0.43
CDK5RAP1-202ENST00000346416 ING3Q9NXR8 418 aa12.38□□□□□ -0.43
CDK5RAP1-202ENST00000346416 URB1O60287 2271 aaKnown RBP12.38□□□□□ -0.43
CDK5RAP1-202ENST00000346416 A0A0A6YYH2 397 aa12.38□□□□□ -0.43
CDK5RAP1-202ENST00000346416 A0A0U1RQV5 110 aa12.38□□□□□ -0.43
CDK5RAP1-202ENST00000346416 A6NJ64 397 aa12.38□□□□□ -0.43
CDK5RAP1-202ENST00000346416 PRR33A8MZF0 331 aa12.38□□□□□ -0.43
CDK5RAP1-202ENST00000346416 APOC1P02654 83 aa12.38□□□□□ -0.43
CDK5RAP1-202ENST00000346416 ITGB2P05107 769 aa12.38□□□□□ -0.43
CDK5RAP1-202ENST00000346416 RAB6AP20340 208 aa12.38□□□□□ -0.43
CDK5RAP1-202ENST00000346416 UNC119Q13432 240 aa12.38□□□□□ -0.43
CDK5RAP1-202ENST00000346416 RAB35Q15286 201 aa12.38□□□□□ -0.43
CDK5RAP1-202ENST00000346416 ANGPTL5Q86XS5 388 aa12.38□□□□□ -0.43
CDK5RAP1-202ENST00000346416 PAQR4Q8N4S7 273 aaPredicted RBP12.38□□□□□ -0.43
CDK5RAP1-202ENST00000346416 GIMAP1Q8WWP7 306 aa12.38□□□□□ -0.43
CDK5RAP1-202ENST00000346416 TMEM45BQ96B21 275 aa12.38□□□□□ -0.43
CDK5RAP1-202ENST00000346416 MED28Q9H204 178 aa12.38□□□□□ -0.43
CDK5RAP1-202ENST00000346416 ASCL3Q9NQ33 180 aa12.38□□□□□ -0.43
CDK5RAP1-202ENST00000346416 PAQR5Q9NXK6 330 aaPredicted RBP12.38□□□□□ -0.43
CDK5RAP1-202ENST00000346416 TAS2R8Q9NYW2 309 aa12.38□□□□□ -0.43
CDK5RAP1-202ENST00000346416 RAB22AQ9UL26 194 aa12.38□□□□□ -0.43
CDK5RAP1-202ENST00000346416 FLVCR2Q9UPI3 526 aa12.38□□□□□ -0.43
CDK5RAP1-202ENST00000346416 NOSIPQ9Y314 301 aaKnown RBP12.38□□□□□ -0.43
CDK5RAP1-202ENST00000346416 PRRC2CQ9Y520 2896 aaKnown RBP12.38□□□□□ -0.43
CDK5RAP1-202ENST00000346416 IGKV3D-15A0A087WSY6 115 aa12.37□□□□□ -0.43
CDK5RAP1-202ENST00000346416 SYNGR3O43761 229 aa12.37□□□□□ -0.43
CDK5RAP1-202ENST00000346416 BPNT1O95861 308 aa12.37□□□□□ -0.43
CDK5RAP1-202ENST00000346416 CSF1P09603 554 aa12.37□□□□□ -0.43
CDK5RAP1-202ENST00000346416 PATE4P0C8F1 98 aa12.37□□□□□ -0.43
CDK5RAP1-202ENST00000346416 VSIG8P0DPA2 414 aa12.37□□□□□ -0.43
CDK5RAP1-202ENST00000346416 CD46P15529 392 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms